BLASTX nr result

ID: Ephedra28_contig00012471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012471
         (737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              72   1e-10

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
 Frame = -2

Query: 493 QRISEIIQKAKGDTPGTSQQVKKVSWNLPNQSDLSGLEDFLSDTASASQLRHGLWTDYAK 314
           + ISE+++  + +    S   K V   LP     S L++FLS+            T++ K
Sbjct: 96  KHISELLEHIQ-EAGKKSALPKAVQRYLPASESFSKLKEFLSEA-----------TNFVK 143

Query: 313 DL-----NEVVKAVTEEFKLKLPWVAAGMVVVGFVLERFLNISSNKEECLDLLDEMYRLC 149
           D+       +V+ + +           G++VV  +LERF ++S N++EC  +L EM  L 
Sbjct: 144 DIIPGDAKTIVRGLLQGMGTA-HLATTGLLVVANILERFEDVSDNQDECFHVLKEMIFLA 202

Query: 148 SYIKDLRSKPSILEEMKEILQETFQLVVEGAIICCAQRKSSWLLKFMT 5
             +K ++ +P + + M + +++  +L+VEG+I CC+Q  SS    F +
Sbjct: 203 KVVKQIKERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQFSNFFS 250


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