BLASTX nr result

ID: Ephedra28_contig00012446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012446
         (793 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22182.1| unknown [Picea sitchensis]                              91   5e-16
ref|XP_006829688.1| hypothetical protein AMTR_s00126p00039410 [A...    58   4e-06

>gb|ABK22182.1| unknown [Picea sitchensis]
          Length = 127

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 48/123 (39%), Positives = 74/123 (60%)
 Frame = -3

Query: 647 TNMSSYALKPPSMDRGIDWNATTRSKVTTVDFLMEETEAGIAASEYELATDNLNTXXXXX 468
           ++ SS + + P     +DWNA  RSK+ + D +MEE E+ IAA+EYE A+ +L       
Sbjct: 6   SSYSSSSPRRPKPKPKVDWNAANRSKLMSPDVVMEEIESAIAATEYEHASRHLKAAACSD 65

Query: 467 XXXXXXXXXXAESAFKNACEAAANGDYVLALQFSHLALLKCPPYKLNAVSKIHNLISHLK 288
                      + AF++A  A A GD+ + ++ S LALL CPP+K NA+SKI  LI+H+K
Sbjct: 66  VEAA-------DRAFRSARTAVAKGDFEVGMELSQLALLNCPPHKTNAISKIQTLIAHMK 118

Query: 287 RRQ 279
           +++
Sbjct: 119 QQR 121


>ref|XP_006829688.1| hypothetical protein AMTR_s00126p00039410 [Amborella trichopoda]
           gi|548835207|gb|ERM97104.1| hypothetical protein
           AMTR_s00126p00039410 [Amborella trichopoda]
          Length = 121

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = -3

Query: 563 TVDFLMEETEAGIAASEYELATDNLN-----TXXXXXXXXXXXXXXXAESAFKNACEAAA 399
           T + LM E +A IAASEY+ AT  L      +               A+ A+K+AC A A
Sbjct: 12  TPEALMAEIDAAIAASEYQRATAYLKMAAPKSNSKSKQSAQLHDVKAADEAYKSACSAIA 71

Query: 398 NGDYVLALQFSHLALLKCPPYKLNAVSKIHNLIS 297
           +G    AL    +AL KCPP K +A++KIH+L+S
Sbjct: 72  SGQLEPALASLRIALAKCPPDKTSALAKIHSLMS 105


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