BLASTX nr result

ID: Ephedra28_contig00012334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012334
         (814 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EQC35167.1| hypothetical protein SDRG_07399 [Saprolegnia dicl...    59   2e-06

>gb|EQC35167.1| hypothetical protein SDRG_07399 [Saprolegnia diclina VS20]
          Length = 1885

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 65/222 (29%), Positives = 89/222 (40%), Gaps = 11/222 (4%)
 Frame = +3

Query: 180  KSKGNAIVSLDDDETTSQGKKDSPTKNDSKSPASTRSSKRPSASKRNKKTPXXXXXXXXX 359
            K K  A  S D +    + K  S     S   A   S KRPSA K    +          
Sbjct: 1024 KKKPAARSSSDSESPQPRAKAKSKKLAISSDEAPAASKKRPSAKKPRSDSS--------- 1074

Query: 360  XXXXXXXEDTDRKKKGISSSDDADTKKT--VTSARDDTDSRKKGASTINVSDTKMKAPSA 533
                   E   RKKK +SS DDA   KT   T A+  T SRK   S+ + S+      S+
Sbjct: 1075 -------EPPRRKKKVVSSDDDAPKTKTKASTKAKQPTSSRKPPPSSDSSSEQPPPKKSS 1127

Query: 534  CS-----GSKGKALSVKAEPGSKKKAA----PANEGSRKKGEQSVSFALVPYDINPLMEV 686
             S     G K K+ S KA+  S   +A    P N  SR    QS +   V Y  +   ++
Sbjct: 1128 RSNDRSRGKKTKSRSSKAKSHSSTDSAGAPSPPNRASRSARRQSATPKKVRYVSDSNGQL 1187

Query: 687  APDEDAGATTRLKVREVMRLFGVLFRKFLQEEEAHSKEPGQR 812
            AP +D GA++      V  L     RK+    ++ +K   +R
Sbjct: 1188 APSDDEGASSNSSGMNVADL-----RKYKDRAKSKAKRKRRR 1224


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