BLASTX nr result
ID: Ephedra28_contig00012302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012302
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76741.1| unknown [Picea sitchensis] 83 3e-14
gb|ADE75619.1| unknown [Picea sitchensis] 83 3e-14
gb|AEW07790.1| hypothetical protein 0_11598_01, partial [Pinus r... 67 2e-09
ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|2235359... 64 3e-08
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li... 62 8e-08
tpg|DAA56866.1| TPA: hypothetical protein ZEAMMB73_993215 [Zea m... 61 2e-07
tpg|DAA56865.1| TPA: hypothetical protein ZEAMMB73_993215 [Zea m... 61 2e-07
ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group] g... 60 2e-07
gb|EEE55452.1| hypothetical protein OsJ_03610 [Oryza sativa Japo... 60 2e-07
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S... 60 3e-07
gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| T... 59 5e-07
ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-li... 59 7e-07
gb|EMT06642.1| hypothetical protein F775_02146 [Aegilops tauschii] 58 1e-06
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li... 57 2e-06
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao] 57 2e-06
gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu] 57 3e-06
>gb|ADE76741.1| unknown [Picea sitchensis]
Length = 328
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
Frame = +3
Query: 6 HVDVPNSEIQGEDTDGLDQKHQSAQNMETE------EPISLEVRENICRLANSIRVLSAL 167
H DVPN E QGE+ +G +Q +S + + SL VRENICRLAN+IRVLS+L
Sbjct: 220 HTDVPNLEGQGEEENGSEQSTKSIVKSSGDATDGKKDSTSLRVRENICRLANAIRVLSSL 279
Query: 168 GFSLFLDLILDTFEVSIAENVD 233
GFSL L+LILDTFE SI N+D
Sbjct: 280 GFSLSLELILDTFETSIDWNID 301
>gb|ADE75619.1| unknown [Picea sitchensis]
Length = 328
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
Frame = +3
Query: 6 HVDVPNSEIQGEDTDGLDQKHQSAQNMETE------EPISLEVRENICRLANSIRVLSAL 167
H DVPN E QGE+ +G +Q +S + + SL VRENICRLAN+IRVLS+L
Sbjct: 220 HTDVPNLEGQGEEENGSEQSTKSIVKSSGDATDGKKDSTSLRVRENICRLANAIRVLSSL 279
Query: 168 GFSLFLDLILDTFEVSIAENVD 233
GFSL L+LILDTFE SI N+D
Sbjct: 280 GFSLSLELILDTFETSIDWNID 301
>gb|AEW07790.1| hypothetical protein 0_11598_01, partial [Pinus radiata]
gi|383130920|gb|AFG46230.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130922|gb|AFG46231.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130924|gb|AFG46232.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130926|gb|AFG46233.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130928|gb|AFG46234.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130930|gb|AFG46235.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130932|gb|AFG46236.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130934|gb|AFG46237.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130936|gb|AFG46238.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130938|gb|AFG46239.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130940|gb|AFG46240.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
gi|383130942|gb|AFG46241.1| hypothetical protein
0_11598_01, partial [Pinus taeda]
Length = 82
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3
Query: 93 EEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
E+ L VRENICRLAN+IRVLSALGF+L L+LILDTF++SI N+D
Sbjct: 6 EDSTPLRVRENICRLANAIRVLSALGFTLSLELILDTFQMSIEWNID 52
>ref|XP_002524799.1| rrp4, putative [Ricinus communis] gi|223535983|gb|EEF37642.1| rrp4,
putative [Ricinus communis]
Length = 322
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +3
Query: 6 HVDVPNSEIQGEDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFL 185
HVD +S ++ + + DQ +S + T E + LE R NICR+AN++RVLS LGFSL L
Sbjct: 221 HVDARDSMVEDQVNETEDQDTKSNK---TFEEVPLETRRNICRIANAVRVLSTLGFSLTL 277
Query: 186 DLILDTFEVSIAENV 230
++IL+TF +S N+
Sbjct: 278 EVILETFSLSSTLNL 292
>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 319
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/65 (46%), Positives = 48/65 (73%)
Frame = +3
Query: 39 EDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSI 218
E+T+ + K + + ++T PI E R++ICRLAN++RVLSALGF+L ++LI+ T E S+
Sbjct: 225 ENTESKEDKQKLSDEVDTFTPI--ETRKHICRLANAVRVLSALGFTLTIELIIQTAEASL 282
Query: 219 AENVD 233
+ NV+
Sbjct: 283 SSNVE 287
>tpg|DAA56866.1| TPA: hypothetical protein ZEAMMB73_993215 [Zea mays]
Length = 241
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +3
Query: 69 QSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
Q + E E LE R++ICRLANS+RVLSALGF+L ++LI++T E S++ NV+
Sbjct: 155 QQGFSTEAENFTPLETRKHICRLANSVRVLSALGFTLTVELIIETMEASVSSNVE 209
>tpg|DAA56865.1| TPA: hypothetical protein ZEAMMB73_993215 [Zea mays]
Length = 136
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +3
Query: 69 QSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
Q + E E LE R++ICRLANS+RVLSALGF+L ++LI++T E S++ NV+
Sbjct: 50 QQGFSTEAENFTPLETRKHICRLANSVRVLSALGFTLTVELIIETMEASVSSNVE 104
>ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group]
gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza
sativa Japonica Group] gi|113564903|dbj|BAF15246.1|
Os04g0520000 [Oryza sativa Japonica Group]
gi|116310818|emb|CAH67607.1| OSIGBa0145G11.6 [Oryza
sativa Indica Group] gi|215736890|dbj|BAG95819.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|218195230|gb|EEC77657.1| hypothetical protein
OsI_16671 [Oryza sativa Indica Group]
Length = 315
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = +3
Query: 30 IQGEDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFE 209
+ GE+ + ++ K + +E P LE R++ICRLAN++RVLSALGF+L ++LI++T E
Sbjct: 218 VVGENANMMENKLNLSAEVENFTP--LETRKHICRLANAVRVLSALGFTLTVELIIETAE 275
Query: 210 VSIAENVD 233
S++ N++
Sbjct: 276 ASVSSNIE 283
>gb|EEE55452.1| hypothetical protein OsJ_03610 [Oryza sativa Japonica Group]
Length = 428
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = +3
Query: 30 IQGEDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFE 209
+ GE+ + ++ K + +E P LE R++ICRLAN++RVLSALGF+L ++LI++T E
Sbjct: 218 VVGENANMMENKLNLSAEVENFTP--LETRKHICRLANAVRVLSALGFTLTVELIIETAE 275
Query: 210 VSIAENVD 233
S++ N++
Sbjct: 276 ASVSSNIE 283
>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
gi|241938452|gb|EES11597.1| hypothetical protein
SORBIDRAFT_06g031660 [Sorghum bicolor]
Length = 319
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 69 QSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
Q + E E LE R++ICRLAN++RVLSALGF+L ++LI++T E S++ NV+
Sbjct: 233 QQRFSTEAENFTPLETRKHICRLANAVRVLSALGFTLIVELIIETMEASVSSNVE 287
>gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| TPA: hypothetical
protein ZEAMMB73_729707 [Zea mays]
Length = 319
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +3
Query: 69 QSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
Q + E E LE R++ICRLANS+RVLSALGF+L ++LI++T E S + NV+
Sbjct: 233 QQGFSTEAENFTPLETRKHICRLANSVRVLSALGFTLTVELIIETMEASASSNVE 287
>ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 325
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/65 (44%), Positives = 48/65 (73%)
Frame = +3
Query: 39 EDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSI 218
E+T+ + +H+ + ++T S+E R++ICRLAN++RVLSALGF L ++LI+ T E S+
Sbjct: 231 ENTELKEDQHKLSDEVDTFT--SIETRKHICRLANAVRVLSALGFILTIELIIQTAEASL 288
Query: 219 AENVD 233
+ NV+
Sbjct: 289 SSNVE 293
>gb|EMT06642.1| hypothetical protein F775_02146 [Aegilops tauschii]
Length = 270
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = +3
Query: 39 EDTDGLDQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSI 218
E+T+ + +H+ + +E P LE R +ICRLAN++RVLSALGF+L ++LI+ T E +
Sbjct: 81 EETNSNEDQHKLSMEVEAFTP--LETRRHICRLANAVRVLSALGFTLTVELIIQTAEAGL 138
Query: 219 AENVD 233
+ +V+
Sbjct: 139 SSDVE 143
>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
Length = 319
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +3
Query: 69 QSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
Q + E E LE R++ICRLAN++RVLSALGF+L ++LI++T E S + NV+
Sbjct: 233 QQKSSDEAENFTPLETRKHICRLANAVRVLSALGFTLTVELIIETAEASASSNVE 287
>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
Length = 319
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/69 (46%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Frame = +3
Query: 39 EDTDGL--DQKHQSAQN-METEEPIS-LEVRENICRLANSIRVLSALGFSLFLDLILDTF 206
E DG+ DQ + S Q+ +E ++ + LE+R+NICR+AN++RVLS LGF++ DLI++T
Sbjct: 222 EARDGMIVDQANNSEQSTVEKDQAYTPLEMRQNICRIANAVRVLSTLGFNVDADLIIETA 281
Query: 207 EVSIAENVD 233
E+S + N+D
Sbjct: 282 ELSSSLNID 290
>gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu]
Length = 326
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 57 DQKHQSAQNMETEEPISLEVRENICRLANSIRVLSALGFSLFLDLILDTFEVSIAENVD 233
D++ SA+ ET PI E R +ICRLAN++RVLSALGF+L ++LI+ T E S++ NV+
Sbjct: 232 DEQKLSAE-AETFTPI--ETRRHICRLANAVRVLSALGFTLTVELIIQTAEASVSSNVE 287