BLASTX nr result

ID: Ephedra28_contig00012222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00012222
         (645 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17776.1| unknown [Picea sitchensis]                             116   5e-24
gb|ABR16492.1| unknown [Picea sitchensis]                             115   1e-23
gb|ABK25219.1| unknown [Picea sitchensis]                             112   7e-23
gb|ADE76554.1| unknown [Picea sitchensis]                              86   7e-15

>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score =  116 bits (291), Expect = 5e-24
 Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
 Frame = +3

Query: 6   SNEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTNVNTELKEGIDEA 182
           ++ +++ VI R+R     HGFV+F R G   TTD RL V +H  +  N+  E+ + +D+A
Sbjct: 264 TSSEQKAVITRIRGLPKRHGFVTFCREGRT-TTDFRLAVVTHEADLNNIRPEMVQLVDQA 322

Query: 183 WKQGEGDKLDFRGCGKGDLEVLVVRYKRAETYATEDFKLRVSWVEEEDME-KGKSGRWEC 359
           W+    D+L       G    + +RYK  ETY TED+K R+S V E D     ++ RWEC
Sbjct: 323 WRDRTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFRISKVGEADRTGMMENERWEC 381

Query: 360 ALSSRWFKWNDALNGEDASSVLLEADIVSLVKQGALVSRAM 482
            LSSRWFKWND + G  +   +++ D+V+LVK+ A +S AM
Sbjct: 382 GLSSRWFKWNDGITGSASMDSIVKTDVVALVKEAAKLSEAM 422


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score =  115 bits (288), Expect = 1e-23
 Identities = 65/161 (40%), Positives = 95/161 (59%), Gaps = 2/161 (1%)
 Frame = +3

Query: 6   SNEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTNVNTELKEGIDEA 182
           ++ ++R VI R+R     HGFV+F R G   TTD RL V +H  +  N+  E+ + +D+A
Sbjct: 413 TSSEQRAVITRIRGLPKRHGFVTFCREGRT-TTDFRLAVVTHEADLNNIRPEMVQLVDQA 471

Query: 183 WKQGEGDKLDFRGCGKGDLEVLVVRYKRAETYATEDFKLRVSWVEEEDME-KGKSGRWEC 359
           W+    D+L       G    + +RYK  ETY TED+K R+S V E D     ++ RWEC
Sbjct: 472 WRDRTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFRISKVGEADRTGMMENERWEC 530

Query: 360 ALSSRWFKWNDALNGEDASSVLLEADIVSLVKQGALVSRAM 482
            LSSRWFKWND + G  +   +++ D+V+LVK+ A +S  M
Sbjct: 531 GLSSRWFKWNDGITGSASMDSIVKTDVVALVKEAAKLSEDM 571


>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score =  112 bits (281), Expect = 7e-23
 Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
 Frame = +3

Query: 9   NEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSHTESTN-VNTELKEGIDEAW 185
           + +++ VI RVR+    HGFV F R G   T D RLGV +H    N + +E+ E +++AW
Sbjct: 404 SSEQKAVITRVRRLPKRHGFVVFCREG-QTTVDFRLGVVTHAADLNDIRSEMVEWVEKAW 462

Query: 186 KQGEGDKLDFRGCGKGDLEVLVVRYKRAETYATEDFKLRVSWVEEEDMEK-GKSGRWECA 362
           +    D+L F     G   ++ +RYK  ETY TED+K R+S V E D     ++ RWEC 
Sbjct: 463 RDRTPDQL-FVFPHPGRFLMMNIRYKETETYVTEDWKFRISHVAEGDRTGLVRNRRWECG 521

Query: 363 LSSRWFKWNDALNGEDASSVLLEADIVSLVKQGALVS 473
           LSSRWFKWND +    +   +++ D+V+LVK+    S
Sbjct: 522 LSSRWFKWNDGITDSRSMESIMKTDVVALVKEAVKFS 558


>gb|ADE76554.1| unknown [Picea sitchensis]
          Length = 168

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
 Frame = +3

Query: 12  EKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTNVNTELKEGIDEAWK 188
           E++   I  VR+    H FV+F R G   T+D R+G+++H  +  N+  E+ E +D+AW+
Sbjct: 6   EERPAAITSVRRLARRHVFVAFCREG-QMTSDFRMGLTTHEADVANIPAEMVEWVDQAWR 64

Query: 189 -QGEGDKLDFRGCGKGDLEVLVVRYKRAETYATEDFKLRVSWVEEEDMEKGKSGR-WECA 362
            +     L F   G+    V+ + YK  ET+ TED+K R+S + + D       + WEC 
Sbjct: 65  NRNPNQSLVFPPPGR--FLVINICYKETETFLTEDWKFRISQIAKGDRTNIIPNKTWECR 122

Query: 363 LSSRWFKWN-----DALNGEDASSVLLEADIVSLVKQGALVSRAMD 485
           LSSR FKWN      A   ED  S  +E+++V+LVK+    S +++
Sbjct: 123 LSSRSFKWNYGLTDTAKTSEDMDSA-VESEVVALVKEAVKFSESIE 167


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