BLASTX nr result
ID: Ephedra28_contig00012062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00012062
(897 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Popu... 99 3e-18
gb|ABK95608.1| unknown [Populus trichocarpa] 99 3e-18
ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Popu... 94 7e-17
ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Popu... 93 2e-16
gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea] 92 2e-16
ref|XP_006848492.1| hypothetical protein AMTR_s00013p00256900 [A... 91 8e-16
ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, part... 89 2e-15
ref|XP_004247882.1| PREDICTED: glycine-rich RNA-binding protein ... 89 2e-15
ref|XP_002336806.1| predicted protein [Populus trichocarpa] gi|5... 87 6e-15
gb|ABK22994.1| unknown [Picea sitchensis] 87 6e-15
ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|5... 87 8e-15
ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein ... 87 1e-14
ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein ... 86 1e-14
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca] 86 2e-14
gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana cleve... 86 2e-14
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul... 86 2e-14
gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica] 86 2e-14
gb|AFK48773.1| unknown [Lotus japonicus] 85 3e-14
gb|ACN30953.1| unknown [Zea mays] 85 3e-14
gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays] 85 3e-14
>ref|XP_006388122.1| hypothetical protein POPTR_0323s00200g [Populus trichocarpa]
gi|550309536|gb|ERP47036.1| hypothetical protein
POPTR_0323s00200g [Populus trichocarpa]
Length = 145
Score = 98.6 bits (244), Expect = 3e-18
Identities = 55/112 (49%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
Frame = -2
Query: 710 NK*MALARSLFVQKQQ-SILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRD 537
NK +LAR QK Q ++S+ N+IR MS+ K+F+GGLP D +T++D+FS FG V +
Sbjct: 5 NKLGSLARQSISQKGQVPMVSMLNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTE 64
Query: 536 AVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEENR 381
A V D G+S+GFGF+ Y+S E+A A+ +MDG+ +G RT+RVS AEE R
Sbjct: 65 ARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERR 116
>gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 98.6 bits (244), Expect = 3e-18
Identities = 55/112 (49%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
Frame = -2
Query: 710 NK*MALARSLFVQKQQ-SILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRD 537
NK +LAR QK Q ++S+ N+IR MS+ K+F+GGLP D +T++D+FS FG V +
Sbjct: 5 NKLGSLARQSISQKGQVPMVSMVNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTE 64
Query: 536 AVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEENR 381
A V D G+S+GFGF+ Y+S E+A A+ +MDG+ +G RT+RVS AEE R
Sbjct: 65 ARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERR 116
>ref|XP_002300149.2| hypothetical protein POPTR_0001s32720g [Populus trichocarpa]
gi|550348727|gb|EEE84954.2| hypothetical protein
POPTR_0001s32720g [Populus trichocarpa]
Length = 133
Score = 94.0 bits (232), Expect = 7e-17
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Frame = -2
Query: 710 NK*MALARSLFVQKQQ-SILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRD 537
NK +LAR QK Q ++S+ N IR MS+ K+F+GGLP D T++++FS +G V +
Sbjct: 5 NKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSTDDHTLKEAFSGYGEVIE 64
Query: 536 AVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEENR 381
A V D G+S+GFGF+ Y+S E+A A+ +MDG+ +G RT+RVS AEE R
Sbjct: 65 ARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERR 116
>ref|XP_006388124.1| hypothetical protein POPTR_0323s00210g [Populus trichocarpa]
gi|550309538|gb|ERP47038.1| hypothetical protein
POPTR_0323s00210g [Populus trichocarpa]
Length = 134
Score = 92.8 bits (229), Expect = 2e-16
Identities = 54/119 (45%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = -2
Query: 710 NK*MALARSLFVQKQQ-SILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRD 537
NK +LAR QK Q ++S+ N IR MS+ K+F+GGLP D T++++FS +G V +
Sbjct: 5 NKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIE 64
Query: 536 AVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEENRRK*SSKN 360
A V D G+S+GFGF++Y+S E A A +MDG+ +G R +RVS AEE R S N
Sbjct: 65 ARVIMDRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPRSYN 123
>gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]
Length = 127
Score = 92.4 bits (228), Expect = 2e-16
Identities = 47/95 (49%), Positives = 69/95 (72%)
Frame = -2
Query: 671 KQQSILSINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGF 492
K+QS++ + R MSTK+F+GGL D +T+RD+FSSFG V DA V TD +G+S+GF
Sbjct: 17 KEQSLMFMT--ARSMSTKLFIGGLSYGTDDQTLRDAFSSFGDVTDARVITDRDSGRSRGF 74
Query: 491 GFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
GF+ + S+E A +A+ +MDG+++ R +RVS AEE
Sbjct: 75 GFVNFSSDESASSALSAMDGQQLNGRNIRVSYAEE 109
>ref|XP_006848492.1| hypothetical protein AMTR_s00013p00256900 [Amborella trichopoda]
gi|548851798|gb|ERN10073.1| hypothetical protein
AMTR_s00013p00256900 [Amborella trichopoda]
Length = 141
Score = 90.5 bits (223), Expect = 8e-16
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = -2
Query: 656 LSINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITY 477
+S+ NA+R MSTK+FVGGL D +++RD+F+SFG V +A V TD G+S+GFGF+ +
Sbjct: 28 ISMLNAVRFMSTKLFVGGLSFGTDDQSLRDAFASFGDVVEARVITDRDTGRSRGFGFVNF 87
Query: 476 ESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+++E A TA+ SMDG+ + R++RVS A +
Sbjct: 88 DNDEAASTALSSMDGQELQGRSIRVSYAND 117
>ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, partial [Capsella rubella]
gi|482567405|gb|EOA31594.1| hypothetical protein
CARUB_v10014791mg, partial [Capsella rubella]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15
Identities = 41/91 (45%), Positives = 64/91 (70%)
Frame = -2
Query: 659 ILSINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFIT 480
+ S+ ++R MSTK+F+GGL D +++D+FSSFG V +A V D G+S+GFGF++
Sbjct: 55 VTSMLGSLRYMSTKLFIGGLSWGTDDSSLKDAFSSFGDVTEATVIADRETGRSRGFGFVS 114
Query: 479 YESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
Y+SE+ A A++ MDG+ + R +RV+LA E
Sbjct: 115 YDSEDSANNAIKEMDGKELNGRNIRVNLANE 145
>ref|XP_004247882.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 146
Score = 89.0 bits (219), Expect = 2e-15
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = -2
Query: 668 QQSILSINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFG 489
Q S S+ NAIR MSTK+FVGGL D +++R++F+SFG+V +A V D +GKSKGFG
Sbjct: 25 QSSAPSMLNAIRCMSTKLFVGGLSFGTDDQSLREAFTSFGVVVEAKVIMDRDSGKSKGFG 84
Query: 488 FITYESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
F+ + + A A+ +MDG+ + R +RVSLA+E
Sbjct: 85 FVNFTEGQSAQDAMSAMDGQDLNGRNIRVSLAQE 118
>ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|566256321|ref|XP_006388123.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
gi|550309537|gb|ERP47037.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 112
Score = 87.4 bits (215), Expect = 6e-15
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -2
Query: 659 ILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFI 483
++S+ N IR MS+ K+F+GGLP D T++++FS +G V +A V D G+S+GFGF+
Sbjct: 1 MVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFV 60
Query: 482 TYESEEDAITAVQSMDGRRIGSRTLRVSLAEENRRK*SSKN 360
+Y+S E A A +MDG+ +G R +RVS AEE R S N
Sbjct: 61 SYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPPRSYN 101
>gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 87.4 bits (215), Expect = 6e-15
Identities = 41/89 (46%), Positives = 67/89 (75%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
+I +A R MS+KVFVGGL +D +T+R+SF++FG V +A + D G+S+GFGF+T+
Sbjct: 29 AIYSAFRCMSSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFA 88
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
S ++A AV++MDG+ + R++RV++A+E
Sbjct: 89 SPDEANAAVEAMDGKDLQGRSIRVNIAQE 117
>ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|566212207|ref|XP_006373086.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus
trichocarpa] gi|550319792|gb|ERP50883.1| glycine-rich
RNA-binding family protein [Populus trichocarpa]
Length = 131
Score = 87.0 bits (214), Expect = 8e-15
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = -2
Query: 710 NK*MALARSLFVQKQQ-SILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLVRD 537
NK +L R Q Q + S+ N+IR MS+ K+F+GGL D ++++D+FS FG V +
Sbjct: 5 NKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTE 64
Query: 536 AVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEENRR 378
A V TD G+S+GFGF++YES E A A+ +MDG+ +G R +RV A + R+
Sbjct: 65 ARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDKRQ 117
>ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Setaria italica]
Length = 168
Score = 86.7 bits (213), Expect = 1e-14
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = -2
Query: 644 NAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYESEE 465
NA RLMSTK+FVGGL D +T+R +FS+FG V +A + TD G+S+GFGF+ + + +
Sbjct: 30 NAARLMSTKLFVGGLSWGTDDQTLRQAFSTFGEVTEARIITDRETGRSRGFGFVNFSNSD 89
Query: 464 DAITAVQSMDGRRIGSRTLRVSLAEE 387
+A AV SMDG+ + R++RV+ A E
Sbjct: 90 EAKEAVSSMDGQELDGRSVRVNFANE 115
>ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Oryza brachyantha]
Length = 143
Score = 86.3 bits (212), Expect = 1e-14
Identities = 41/86 (47%), Positives = 64/86 (74%)
Frame = -2
Query: 644 NAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYESEE 465
NA RLMSTK+FVGGL + +++RD+F+SFG V +A V TD G+S+GFGF+ + + +
Sbjct: 25 NAARLMSTKLFVGGLSWGTNDDSLRDAFTSFGDVTEARVITDRETGRSRGFGFVNFVNGD 84
Query: 464 DAITAVQSMDGRRIGSRTLRVSLAEE 387
+A +A+++MDG+ +G R +RV+ A E
Sbjct: 85 EAKSAMEAMDGKELGGRNIRVNFANE 110
>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/89 (47%), Positives = 65/89 (73%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
S+ +AIR MSTK+FVGGL D +++RD+F++FG V DA V D +G+S+GFGF+ +
Sbjct: 28 SMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFS 87
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+E A A+++MDG+ + R +RVS+A+E
Sbjct: 88 DDESANEAIKAMDGQELQGRNIRVSIAQE 116
>gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/97 (43%), Positives = 68/97 (70%)
Frame = -2
Query: 677 VQKQQSILSINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSK 498
V ++ S+ +A+R MSTK+FVGGL D +++RD+F++FG V DA V D +G+S+
Sbjct: 20 VSATSTMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSR 79
Query: 497 GFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
GFGF+ + +E A A+++MDG+ + R +RVS+A+E
Sbjct: 80 GFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQE 116
>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/89 (46%), Positives = 65/89 (73%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
S+ +A+R MSTK+FVGGL D +++RD+F++FG V DA V D +G+S+GFGF+ +
Sbjct: 28 SMFDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFS 87
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+E A A+++MDG+ + R +RVS+A+E
Sbjct: 88 DDESANEAIKAMDGQELQGRNIRVSIAQE 116
>gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/89 (46%), Positives = 65/89 (73%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
S+ +A+R MSTK+FVGGL D +++RD+F++FG V DA V D +G+S+GFGF+ +
Sbjct: 28 SMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFS 87
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+E A A+++MDG+ + R +RVS+A+E
Sbjct: 88 DDESANEAIKAMDGQELQGRNIRVSIAQE 116
>gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 85.1 bits (209), Expect = 3e-14
Identities = 47/112 (41%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = -2
Query: 716 YKNK*MALARSLFVQKQQS-ILSINNAIRLMST-KVFVGGLPSCMDAETIRDSFSSFGLV 543
+ NK + R Q+ Q+ + S+ N IR MS+ K+F+GGL +D +++ D+FSSFG V
Sbjct: 3 FLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTV 62
Query: 542 RDAVVPTDIVNGKSKGFGFITYESEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+A V D G+S+GFGF++++SEE A +A+ SMDG+ + R +RVS A +
Sbjct: 63 AEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYAND 114
>gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 85.1 bits (209), Expect = 3e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
++ NA RLMSTK+F+GGL +D +R++FSSFG V +A V TD G+S+GFGF+ Y
Sbjct: 27 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 86
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+ A A+ +MDG+ I R +RV++A E
Sbjct: 87 DSDAAKEAISAMDGKEIDGRQVRVNMANE 115
>gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 85.1 bits (209), Expect = 3e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -2
Query: 653 SINNAIRLMSTKVFVGGLPSCMDAETIRDSFSSFGLVRDAVVPTDIVNGKSKGFGFITYE 474
++ NA RLMSTK+F+GGL +D +R++FSSFG V +A V TD G+S+GFGF+ Y
Sbjct: 27 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 86
Query: 473 SEEDAITAVQSMDGRRIGSRTLRVSLAEE 387
+ A A+ +MDG+ I R +RV++A E
Sbjct: 87 DSDAAKEAISAMDGKEIDGRQVRVNMANE 115