BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011986
         (787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]          79   2e-12
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs...    78   4e-12
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...    77   5e-12
ref|NP_188178.2| pentatricopeptide repeat-containing protein [Ar...    77   9e-12
gb|ABR16456.1| unknown [Picea sitchensis]                              77   9e-12
ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Caps...    76   1e-11
ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_006841256.1| hypothetical protein AMTR_s00135p00094440 [A...    76   1e-11
ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Caps...    76   1e-11
gb|AFW79512.1| DNA-binding protein [Zea mays]                          76   1e-11
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab...    76   1e-11
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|...    76   1e-11
ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [A...    75   2e-11
ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arab...    75   2e-11

>ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 39/124 (31%), Positives = 63/124 (50%)
 Frame = -3

Query: 398 WLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCISKAD 219
           W+ +GN +S+++    M  L R + +  A   S WL      EF+E +Y S +  I+K  
Sbjct: 165 WVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDYASRVHLIAKVQ 224

Query: 218 DIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDYNLM 39
            +   E    K+P   +G   +R LL  YV+  N+EK + VF ++K   F + +  YN M
Sbjct: 225 GLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLEFPMSIFAYNQM 284

Query: 38  LLAY 27
           L+ Y
Sbjct: 285 LVLY 288


>ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
           gi|449506005|ref|XP_004162626.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 606

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 45/133 (33%), Positives = 64/133 (48%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ EGN++S ++    M  L R   +  A   S WL      EF+E++Y S L  I+
Sbjct: 156 LDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNENDYASRLDLIA 215

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E    K+P   +G   YR LL  YV   N+ K + VF +MK   F +    Y
Sbjct: 216 KVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFPMTTFAY 275

Query: 47  NLMLLAYLSRKRN 9
           N +L+ Y   KRN
Sbjct: 276 NQVLVLY---KRN 285


>gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
          Length = 608

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ EG+++S+++    M  L +   +  A   S WL      EF+E +Y S+L  I+
Sbjct: 160 LDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADYASHLDLIA 219

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E    K+P   +G   YR LL  YV+  +++K + VF RMK   F +    Y
Sbjct: 220 KVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLEFPMTTFAY 279

Query: 47  NLMLLAY--LSRKR 12
           + ML+ Y  + R+R
Sbjct: 280 DQMLILYKRIDRRR 293


>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335948|gb|EFH66365.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 594

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 42/127 (33%), Positives = 60/127 (47%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ +G D S+ E+   M +L +   Y  A  ++ WL   + FE  E +Y S L  IS
Sbjct: 146 LDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYASRLDLIS 205

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E   + +P   +G   YR LL  YV   N+   + VF +MK  GF L     
Sbjct: 206 KVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFPLSTFTC 265

Query: 47  NLMLLAY 27
           N ML+ Y
Sbjct: 266 NQMLILY 272


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 43/127 (33%), Positives = 66/127 (51%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W+ +G ++S+EE    M  L R + Y  A  +S WL  ++  EF E +Y S L  I+
Sbjct: 176 LEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIA 235

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E+  +K+P   +G   YR LL   V + NL+K + +F +MK   F L     
Sbjct: 236 KLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFAC 295

Query: 47  NLMLLAY 27
           N +LL Y
Sbjct: 296 NQLLLLY 302


>ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g15590, mitochondrial; Flags: Precursor
           gi|11994226|dbj|BAB01348.1| DNA-binding protein
           [Arabidopsis thaliana] gi|20856658|gb|AAM26678.1|
           AT3g15590/MQD17_5 [Arabidopsis thaliana]
           gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5
           [Arabidopsis thaliana] gi|332642175|gb|AEE75696.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 610

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 39/132 (29%), Positives = 65/132 (49%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W++EG D+S+ E    +  L + + Y +   +  WL     FEF E NY S L  ++
Sbjct: 161 LEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVA 220

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E+  + +P   +G   YR LL   V++ ++ K + +F +MK+  F   V   
Sbjct: 221 KVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFAC 280

Query: 47  NLMLLAYLSRKR 12
           N +LL Y    R
Sbjct: 281 NQLLLLYSMHDR 292


>gb|ABR16456.1| unknown [Picea sitchensis]
          Length = 600

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 43/127 (33%), Positives = 65/127 (51%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ WL +GN +++ E       L     ++    VS WL G++ F+  E +Y S L  I+
Sbjct: 150 LEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTERDYASRLDVIT 209

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   I   E  F  +P+ M+G + Y  LL  Y    N+EK + +F +MK  GF L   +Y
Sbjct: 210 KILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTAFEY 269

Query: 47  NLMLLAY 27
           N +LL Y
Sbjct: 270 NQLLLLY 276


>ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Capsella rubella]
           gi|482575766|gb|EOA39953.1| hypothetical protein
           CARUB_v10008643mg [Capsella rubella]
          Length = 597

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 40/127 (31%), Positives = 63/127 (49%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ EG +I++ E  + M  L +   Y  A  ++ WL   + FE +E +Y S L  IS
Sbjct: 149 LDKWIEEGKEINRTELANAMLELRKRRMYGRALQMTEWLDEHKQFELEERDYASRLDLIS 208

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E+  +++P   +G   YR LL  Y    N+ K + VF +M+  GF L     
Sbjct: 209 KVRGLYKGEVYIERIPESFRGELVYRTLLSNYAATSNVRKTEEVFNKMRDLGFPLSTFAC 268

Query: 47  NLMLLAY 27
           + ML+ Y
Sbjct: 269 DQMLILY 275


>ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 394

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 36/129 (27%), Positives = 66/129 (51%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W+ +GN I+  +  D+ + L R + Y+ A ++S W++  E +E  + +Y   +  ++
Sbjct: 64  LQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDYAVRIDLMT 123

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           +   I A E  F+ LP   K  + Y  LL  Y   +  EK + ++ R+K +    D   Y
Sbjct: 124 QVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDALTY 183

Query: 47  NLMLLAYLS 21
           N M+  Y+S
Sbjct: 184 NEMMTLYMS 192


>ref|XP_006841256.1| hypothetical protein AMTR_s00135p00094440 [Amborella trichopoda]
           gi|548843172|gb|ERN02931.1| hypothetical protein
           AMTR_s00135p00094440 [Amborella trichopoda]
          Length = 398

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 38/128 (29%), Positives = 68/128 (53%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W+ EG  +S+ E   +++ L + + Y+ A ++S W+ GRE F+F E +Y   +  I+
Sbjct: 65  LERWVGEGKPVSQAELRLIVKDLKKSQRYKHALEISEWMEGREEFKFSEGDYTVRIDLIT 124

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   + A    F+ +P   K V+ Y  LL  Y  E+  EK + +   ++ +G  L V  Y
Sbjct: 125 KVLGVDAANEYFENVPLIGKTVESYTALLHSYAAEKQTEKAERLVEEIQGSGLTLSVLPY 184

Query: 47  NLMLLAYL 24
           N ++  Y+
Sbjct: 185 NELMTLYI 192


>ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 603

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 45/136 (33%), Positives = 66/136 (48%)
 Frame = -3

Query: 416 RVYLKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQ 237
           R  L  W+ EG ++S+EE    M  L R + Y  A  +S WL  ++  EF + +Y S L 
Sbjct: 153 RTALDKWVEEGKELSREEISLTMANLRRRKMYGRALQLSEWLESKKHLEFVDSDYASRLD 212

Query: 236 CISKADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDV 57
            I+K   + A E   + +P   +G   YR LL   V+  NL K + +F +MK   F +  
Sbjct: 213 LIAKLRGLHAAEGFIESIPESFRGEIVYRTLLANCVVLNNLHKAEEIFNKMKDLEFPVTA 272

Query: 56  GDYNLMLLAYLSRKRN 9
              N +L  Y   KRN
Sbjct: 273 FACNQLLFLY---KRN 285


>ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 609

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 45/136 (33%), Positives = 66/136 (48%)
 Frame = -3

Query: 416 RVYLKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQ 237
           R  L  W+ EG ++S+EE    M  L R + Y  A  +S WL  ++  EF + +Y S L 
Sbjct: 159 RTALDKWVEEGKELSREEISLTMANLRRRKMYGRALQLSEWLESKKHLEFVDSDYASRLD 218

Query: 236 CISKADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDV 57
            I+K   + A E   + +P   +G   YR LL   V+  NL K + +F +MK   F +  
Sbjct: 219 LIAKLRGLHAAEGFIESIPESFRGEIVYRTLLANCVVLNNLHKAEEIFNKMKDLEFPVTA 278

Query: 56  GDYNLMLLAYLSRKRN 9
              N +L  Y   KRN
Sbjct: 279 FACNQLLFLY---KRN 291


>ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Capsella rubella]
           gi|565488787|ref|XP_006302033.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
           gi|482570742|gb|EOA34930.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
           gi|482570743|gb|EOA34931.1| hypothetical protein
           CARUB_v10020014mg [Capsella rubella]
          Length = 598

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 45/127 (35%), Positives = 61/127 (48%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ +GNDI++ E    M +L R   +  A  +S WL   +  E DE +Y S L    
Sbjct: 150 LDKWVEDGNDITRVEVAKAMFQLRRRRMFGRALQMSEWLEANKKIEMDERDYASRLDLTV 209

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E   QK+P   KG   YR LL   V   N++K ++VF  MK  GF L     
Sbjct: 210 KIRGLEKGEADMQKIPKSFKGEVVYRTLLANCVAACNVKKSELVFNTMKDLGFPLSAFTC 269

Query: 47  NLMLLAY 27
           + MLL Y
Sbjct: 270 DQMLLLY 276


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W ++GN   + E   V+  L +   Y  A ++  W+   +LFEF E +Y ++L   +
Sbjct: 173 LEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHLDLTA 232

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E   +K+P   +G   YR LL   V   N++K + VF RMK  GF +    +
Sbjct: 233 KVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSF 292

Query: 47  NLMLLAY--LSRKR 12
           N +LL Y  L RK+
Sbjct: 293 NQLLLLYKRLDRKK 306


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 399

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 36/129 (27%), Positives = 66/129 (51%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W+ +GN I+  +  D+ + L R + Y+ A ++S W++  E +E  + +Y   +  ++
Sbjct: 69  LQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDYAVRIDLMT 128

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           +   I A E  F+ LP   K  + Y  LL  Y   +  EK + ++ R+K +    D   Y
Sbjct: 129 QVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDALTY 188

Query: 47  NLMLLAYLS 21
           N M+  Y+S
Sbjct: 189 NEMMTLYMS 197


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 395

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/129 (27%), Positives = 66/129 (51%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W+ +GN ++  +  D+ + L R + Y+ A ++S W++  E +E  + +Y + +   +
Sbjct: 65  LQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDYAARIDLTT 124

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   I A E  F+ LP   K  + Y  LL  Y   +  +K + ++ R+K +    D   Y
Sbjct: 125 KVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSNLSFDALTY 184

Query: 47  NLMLLAYLS 21
           N M+  Y+S
Sbjct: 185 NEMMTLYMS 193


>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
           lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
           ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L  W+ EGN+I++ E    M +L R   Y  A  +S WL   +  E +E +Y S L    
Sbjct: 149 LDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNERDYSSRLDLTV 208

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E   QK+P   KG   YR LL   V   N++K ++VF RMK  GF L     
Sbjct: 209 KIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLGFPLSGFTC 268

Query: 47  NLMLLAY--LSRKR 12
           + MLL Y  + RK+
Sbjct: 269 DQMLLLYKRIDRKK 282


>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
           DNA-binding protein [Zea mays]
          Length = 622

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
 Frame = -3

Query: 407 LKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCIS 228
           L+ W ++GN   + E   V+  L +   Y  A ++  W+   +LFEF E +Y ++L   +
Sbjct: 173 LEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHLDLTA 232

Query: 227 KADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDY 48
           K   +   E   +K+P   +G   YR LL   V   N++K + VF RMK  GF +    +
Sbjct: 233 KVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSF 292

Query: 47  NLMLLAY--LSRKR 12
           N +LL Y  L RK+
Sbjct: 293 NQLLLLYKRLDRKK 306


>ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [Amborella trichopoda]
           gi|548837326|gb|ERM98104.1| hypothetical protein
           AMTR_s00095p00019470 [Amborella trichopoda]
          Length = 637

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/124 (32%), Positives = 65/124 (52%)
 Frame = -3

Query: 398 WLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRELFEFDEDNYVSYLQCISKAD 219
           W+ +GN +++E     M  L +   +  A  +S WL   + FEF+E +Y S +  I+K  
Sbjct: 182 WVADGNVVNREGVWGAMFNLRKRRMFARALQLSDWLDANKPFEFNERDYQSRVDLIAKVH 241

Query: 218 DIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDVVFGRMKKAGFELDVGDYNLM 39
            I   E   +KLP  ++G   YR LL      RN++K + VF +MK  GF++    Y+ +
Sbjct: 242 GIHRAEKYIEKLPQPVRGEVLYRTLLANCSTTRNVKKAEEVFNKMKDLGFKMTAFSYDQL 301

Query: 38  LLAY 27
           +L Y
Sbjct: 302 ILIY 305


>ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
           lyrata] gi|297315706|gb|EFH46129.1| hypothetical protein
           ARALYDRAFT_354609 [Arabidopsis lyrata subsp. lyrata]
          Length = 480

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 42/144 (29%), Positives = 71/144 (49%)
 Frame = -3

Query: 458 WKALERCGESDEDFRVYLKYWLREGNDISKEEYEDVMRRLMRDEEYELASDVSSWLLGRE 279
           +K +   G+        L  W  EGN  SKEE   +++ L++ + +  A +VS W+  R 
Sbjct: 39  YKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSDRM 98

Query: 278 LFEFDEDNYVSYLQCISKADDIAAVELAFQKLPTKMKGVKPYRVLLKKYVIERNLEKVDV 99
            F     ++ + +  IS+   +   E+ F+ +P  MKG+  +  LL  Y  E++ EK   
Sbjct: 99  FFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKAAK 158

Query: 98  VFGRMKKAGFELDVGDYNLMLLAY 27
           +   MK+AG  +D   YNLM+  Y
Sbjct: 159 LVEAMKEAGVSMDTRCYNLMMNMY 182