BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011974
         (2397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...   938   0.0  
ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [A...   934   0.0  
ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation spec...   909   0.0  
gb|EOY23219.1| Cleavage and polyadenylation specificity factor 1...   906   0.0  
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...   901   0.0  
ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation spec...   898   0.0  
ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation spec...   898   0.0  
ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec...   897   0.0  
ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation spec...   893   0.0  
ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citr...   892   0.0  
gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus...   892   0.0  
gb|EXC19142.1| Cleavage and polyadenylation specificity factor s...   890   0.0  
ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation spec...   887   0.0  
ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec...   887   0.0  
ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation spec...   882   0.0  
ref|XP_006369487.1| Cleavage and polyadenylation specificity fac...   882   0.0  
ref|XP_002330904.1| predicted protein [Populus trichocarpa]           882   0.0  
ref|NP_001063978.1| Os09g0569400 [Oryza sativa Japonica Group] g...   881   0.0  
ref|XP_003565596.1| PREDICTED: cleavage and polyadenylation spec...   874   0.0  
ref|XP_003578687.1| PREDICTED: cleavage and polyadenylation spec...   873   0.0  

>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
            protein product [Vitis vinifera]
          Length = 740

 Score =  938 bits (2424), Expect = 0.0
 Identities = 475/685 (69%), Positives = 555/685 (81%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL++H DT H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLLAHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L YSQNY L GKGEGIVI P+ AG LLGGTVWKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKER LNGTVLESFVRPAVLITDAYNALNNQPSRRQ  DQEFLD+IL+TLRGDGNVLLP
Sbjct: 177  HRKERLLNGTVLESFVRPAVLITDAYNALNNQPSRRQR-DQEFLDVILKTLRGDGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LEQYW +HHL YPI FLT VA+ST+D+VKSFLEWMSDSIAKSFEH+R
Sbjct: 236  VDTAGRVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF LK++ +L+S+ EL+++P+GPK+VLASMASLE GFS DIF++WA+D KNLV+F+ER
Sbjct: 296  DNAFLLKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQF TLARMLQA+P PKAVKVT+SKRVPL GEEL AYEEEQ R+K EEALKA+ SKE+++
Sbjct: 356  GQFATLARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEM 415

Query: 1098 KSSFVSDN-TSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  SDN   DPMVID                 HRD+L DGF+P S+S+APMFPF E  
Sbjct: 416  KASRGSDNKLGDPMVIDTTTPPASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENS 475

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+PE+YVIK+ D                D  A  L+ DT  +KV+S+E+TV
Sbjct: 476  SEWDDFGEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKC L Y+DFEGRSDGRSIKSI+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVYAP
Sbjct: 536  QVKCMLVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVND 1796
            QI ETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YE+AW+D +VGK +   LSLLPL   
Sbjct: 596  QIGETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTP 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQKSG---VHQ 1967
            PP H +VFVGD+++ADFKQ LASKG+Q EF GG LRCG+Y+T+RKVGD+SQK G   + Q
Sbjct: 656  PPSHDTVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQ 715

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IV+EGPL +EY+KIR+YLYSQ+Y+L
Sbjct: 716  IVMEGPLCDEYYKIREYLYSQYYLL 740


>ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [Amborella trichopoda]
            gi|548832261|gb|ERM95057.1| hypothetical protein
            AMTR_s00009p00247750 [Amborella trichopoda]
          Length = 737

 Score =  934 bits (2413), Expect = 0.0
 Identities = 474/684 (69%), Positives = 550/684 (80%), Gaps = 9/684 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH DT H+GALPYA+K+FGL AP+Y TEPV++ GLLTMYDH+LSRR VS       
Sbjct: 57   AVLLSHPDTVHLGALPYAMKQFGLSAPVYSTEPVHKLGLLTMYDHYLSRRQVSDFDLFSL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L YSQ+Y L+GKGEGIVITP+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDAAFQNVTRLTYSQDYHLSGKGEGIVITPHVAGHLLGGTIWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVLESFVRPAVLITDAYNALNNQPS RQ  DQEFLD ILRTLRGDG VLLP
Sbjct: 177  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSTRQR-DQEFLDAILRTLRGDGKVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LEQYW +HHL+YPIAFLTNVATST+++ KS LEWM DSI KSFEH+R
Sbjct: 236  VDTAGRVLELILILEQYWTQHHLSYPIAFLTNVATSTIEYAKSSLEWMIDSIGKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DN F LK  N+++++KEL+++PEGPKVVLASMASLEEGFS DIF++WA D KNLV+FTER
Sbjct: 296  DNVFVLKNFNIIINKKELEKLPEGPKVVLASMASLEEGFSHDIFVEWAVDSKNLVVFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
             QFGTLARMLQ +P PK VKVT+ KRVPL GEELKAYEEEQNR+K EEALKA+ SKE+D+
Sbjct: 356  AQFGTLARMLQVDPPPKVVKVTMHKRVPLVGEELKAYEEEQNRIKKEEALKASLSKEDDL 415

Query: 1098 KSSFV--SDNTSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEG 1259
            K+S +    + SDPMVID                 +RDVL DGF+P S+S++PMFPF E 
Sbjct: 416  KASCIVPDKSLSDPMVIDSAGGLISSEVASPRIVGYRDVLIDGFVPPSTSVSPMFPFYEN 475

Query: 1260 LKEWDEYGEVIDPENYVIKND---XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDE 1430
             +EWD++GEVI+P++Y IK +                   D  + D+L D+K +KVVS+E
Sbjct: 476  SREWDDFGEVINPDDYAIKEEDMLDPTSVAVLGGGLEDKFDEDSNDMLLDSKPSKVVSNE 535

Query: 1431 VTVHVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHV 1610
            +TV VKCSL Y DFEGRSD RSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK   SHV
Sbjct: 536  LTVQVKCSLIYKDFEGRSDSRSIKTILAHVAPLKLVLVHGSAEATEHLKQHCLKNVCSHV 595

Query: 1611 YAPQIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDDMLSLLPLV 1790
            YAPQI ETIDVTSDL AYKV+LSE+LMS+VLFKKLG+YEIAWIDG+V + D ML+L+PL 
Sbjct: 596  YAPQIGETIDVTSDLCAYKVRLSERLMSNVLFKKLGDYEIAWIDGEVNETDGMLTLVPLS 655

Query: 1791 NDPPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQKSGVHQI 1970
              PPLHKSV VGDL+LADFKQ LASKGV AEF  G LRCG+ IT+RKVGDS  K    Q+
Sbjct: 656  TGPPLHKSVLVGDLKLADFKQFLASKGVPAEFSKGFLRCGENITLRKVGDS--KGATQQV 713

Query: 1971 VIEGPLTEEYFKIRQYLYSQFYVL 2042
             IEGPLTEEY+KIR+ LYSQFY+L
Sbjct: 714  GIEGPLTEEYYKIRELLYSQFYLL 737


>ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cicer arietinum]
          Length = 740

 Score =  909 bits (2348), Expect = 0.0
 Identities = 464/685 (67%), Positives = 546/685 (79%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH DT H+GALPYA+K+ GL AP++ TEPVYR GLLTMYDHFLSR+ +S       
Sbjct: 57   AVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDHFLSRKQISDFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQN+ L+GKGEGIVI P+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 117  DHIDSAFQSVTRLTYSQNHHLSGKGEGIVIAPHNAGHLLGGTIWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVL SFVRPAVLITDAYNALNNQP RRQ  D+EF D++ +TLR  GNVLLP
Sbjct: 177  HRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQK-DKEFGDILKKTLRAGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LE YW+  +L YPI FLT VA+ST+D+VKSFLEWMSDSIAKSFE +R
Sbjct: 236  VDTAGRVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +N F LKY+ +++++ + D  P+GPKVVLASMASLE GFS DIF++W +D KNLV+FTER
Sbjct: 296  ENIFLLKYVTLMVNKTDFDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVKVTVSKRVPL GEEL AYEEEQNR+K EEALKA+  KEE++
Sbjct: 356  GQFGTLARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRIKKEEALKASLLKEEEL 415

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXR----HRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  +D NTSDPMVID            +    +RDV  DGF+P S+S+APMFP  E  
Sbjct: 416  KASHGADNNTSDPMVIDTGNKQPSPEATVQRNGGYRDVFIDGFVPPSTSVAPMFPCYENT 475

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YVIK+ D                D     L+ DTK +KV+SDE TV
Sbjct: 476  SEWDDFGEVINPDDYVIKDEDMDQNANHVGGDINGKLDEGPASLILDTKPSKVLSDERTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             V+CSL Y+DFEGRSDGRSIK+I+ HVAPLKLVLVHGSAEAT+HL+QHCLK    HVYAP
Sbjct: 536  QVRCSLIYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGK-NDDMLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSE+LMS+VLFKKLGEYEIAW+D +VGK  +DMLSLLP+   
Sbjct: 596  QIEETIDVTSDLCAYKVQLSERLMSNVLFKKLGEYEIAWVDAEVGKAENDMLSLLPVSGP 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
            P  HKSV VGDL+LADFKQ L++KGV  EF GG LRCG+Y+TVRKVGD++QK   SG  Q
Sbjct: 656  PRPHKSVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDAAQKGAGSGTQQ 715

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            I+IEGPL E+Y+KIR YLYSQFY+L
Sbjct: 716  IIIEGPLCEDYYKIRDYLYSQFYLL 740


>gb|EOY23219.1| Cleavage and polyadenylation specificity factor 100 isoform 1
            [Theobroma cacao]
          Length = 742

 Score =  906 bits (2342), Expect = 0.0
 Identities = 464/686 (67%), Positives = 549/686 (80%), Gaps = 11/686 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH DT H+GALPYA+K+FGL AP+Y TEPV+R GLLTMYD +LSR+ VS       
Sbjct: 57   AVLLSHPDTLHLGALPYAMKQFGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFELFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L YSQNY L+GKGEGIVI P+ AG LLGGTVWKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQNVTRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTI-DQEFLDMILRTLRGDGNVLL 554
             RKE+HLNGTVLESFVRPAVLITDAYNALNNQP ++Q   D++F+D I RTL   GNVLL
Sbjct: 177  RRKEKHLNGTVLESFVRPAVLITDAYNALNNQPPKQQRERDRDFVDTISRTLEAGGNVLL 236

Query: 555  PVDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHS 734
            PVDT GRVLELLL LE++WA   L YPI FLT V++ST+D+VKSFLEWMSD+IAKSFE S
Sbjct: 237  PVDTTGRVLELLLVLEEHWAMKSLNYPIFFLTYVSSSTIDYVKSFLEWMSDAIAKSFETS 296

Query: 735  RDNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTE 914
            RDNAF L+++ +L+S+ ELD++P+GPKVVLASMASLE GFS DIF++WA+D KNLV+FTE
Sbjct: 297  RDNAFLLRHVTLLISKNELDKVPDGPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTE 356

Query: 915  RGQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEED 1094
            RGQFGTLARMLQA+P PKAVKV +S+RVPL GEEL A+EEEQNRLK EEALKA+  KEE+
Sbjct: 357  RGQFGTLARMLQADPPPKAVKVMMSRRVPLVGEELIAHEEEQNRLKKEEALKASLIKEEE 416

Query: 1095 IKSSFVSD-NTSDPMVIDXXXXXXXXXXXXRH----RDVLCDGFIPSSSSIAPMFPFDEG 1259
             K+S V D ++SDPMVID            +H    RD+L DGF+P S+S+APMFPF E 
Sbjct: 417  SKASIVPDISSSDPMVIDTNNKHSSLDGLGQHGSGYRDILIDGFVPPSTSVAPMFPFYEN 476

Query: 1260 LKEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVT 1436
              +WD++GEVI+P++YVIK+ D                D  +  L+ DT  +KV+S+E+T
Sbjct: 477  ASDWDDFGEVINPDDYVIKDEDMDQAAMHVGGDMDGKVDEASASLIVDTTPSKVISNELT 536

Query: 1437 VHVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYA 1616
            V VK SL Y+D+EGRSDGRS+KSI+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVYA
Sbjct: 537  VQVKSSLIYMDYEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYA 596

Query: 1617 PQIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVN 1793
            PQIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEIAW+D +VGK + +MLSLLPL  
Sbjct: 597  PQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENEMLSLLPLST 656

Query: 1794 DPPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVH 1964
              P HKSV VGDL+LADFKQ LASKGV+ EF GG LRCG+Y+T+RKVG +SQK   SG  
Sbjct: 657  PAPPHKSVVVGDLKLADFKQFLASKGVKVEFAGGALRCGEYVTLRKVGFASQKGGGSGTQ 716

Query: 1965 QIVIEGPLTEEYFKIRQYLYSQFYVL 2042
            QI+IEGPL E+Y+KIR YLYSQFY+L
Sbjct: 717  QIIIEGPLCEDYYKIRDYLYSQFYLL 742


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223542884|gb|EEF44420.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 740

 Score =  901 bits (2328), Expect = 0.0
 Identities = 463/685 (67%), Positives = 543/685 (79%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH+DT H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR++VS       
Sbjct: 57   AVLLSHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQN+T L YSQN+ L+GKGEGIVI P+ AG LLGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDSAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLD-MILRTLRGDGNVLL 554
            HRKERHLNGTVLESFVRPAVLITDAYNAL+NQP R+Q  D+EFL+  IL+TL   GNVLL
Sbjct: 177  HRKERHLNGTVLESFVRPAVLITDAYNALSNQPPRQQR-DKEFLEKTILKTLEAGGNVLL 235

Query: 555  PVDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHS 734
            PVDTAGRVLELLL LEQ+WA   L YPI FLT V++ST+D+VKSFLEWMSDSIAKSFE S
Sbjct: 236  PVDTAGRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETS 295

Query: 735  RDNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTE 914
            RDNAF LK++ +L+++ ELD  P  PKVVLASMASLE GFS DIF++WA+D KNLV+FTE
Sbjct: 296  RDNAFLLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTE 355

Query: 915  RGQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEED 1094
            RGQFGTLARMLQA+P PKAVKVT+S+RVPL G+EL AYEEEQ RLK EE L A+  KEE+
Sbjct: 356  RGQFGTLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEE 415

Query: 1095 IKSSFVSD-NTSDPMVIDXXXXXXXXXXXXR----HRDVLCDGFIPSSSSIAPMFPFDEG 1259
             K S   D N SDPM+ID                 +RD+L DGF+P S+S+APMFPF E 
Sbjct: 416  AKVSHGPDSNLSDPMIIDASNNNASLDAVGSQGTGYRDILFDGFVPPSTSVAPMFPFYEN 475

Query: 1260 LKEWDEYGEVIDPENYVIKNDXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
              EWD++GEVI+P++YVIK+D                D  +   + DTK +KVVS E+TV
Sbjct: 476  TTEWDDFGEVINPDDYVIKDDDMDQPMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+D+EGRSDGRSIKSI+ HVAPLKLVLVHGSAE+TEHL+QHCLK    HVYAP
Sbjct: 536  QVKCSLIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG++EIAW+D +VGK + D LSLLP+   
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTS 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL++ADFKQ LASKGVQ EF GG LRCG+Y+T+RKVG+ +QK   SG  Q
Sbjct: 656  APPHKSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQ 715

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IVIEGPL E+Y+KIR+YLYSQFY+L
Sbjct: 716  IVIEGPLCEDYYKIREYLYSQFYLL 740


>ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X2 [Glycine max]
          Length = 727

 Score =  898 bits (2320), Expect = 0.0
 Identities = 465/685 (67%), Positives = 541/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHADT H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 45   AVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 104

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQN+  +GKGEGIVI P+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 105  DDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFN 164

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVL SFVRPAVLITDAYNALNNQP RRQ  D+EF D++ +TLR  GNVLLP
Sbjct: 165  HRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQN-DKEFGDILKKTLRAGGNVLLP 223

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDT GRVLEL+L LE YWA  +L YPI FLT VA+ST+D+VKSFLEWMSD+IAKSFE +R
Sbjct: 224  VDTVGRVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTR 283

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +N F LKY+ +L+++ ELD  P+GPKVVLASMASLE GFS DIF++WA+D KNLV+FTER
Sbjct: 284  ENIFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTER 343

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQF TLARMLQA+P PKAVKV VSKRVPL GEEL AYEEEQNR+K +EALKA+  KEE++
Sbjct: 344  GQFATLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIK-KEALKASLMKEEEL 402

Query: 1098 KSSFVSDN-TSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  +DN  SDPMVID                 +RD+  DGF+P S+S+AP+FP  E  
Sbjct: 403  KTSHGADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENT 462

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YVIK+ D                D  A  L+ DTK +KVVSDE TV
Sbjct: 463  SEWDDFGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTV 522

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             V+CSL Y+DFEGRSDGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVYAP
Sbjct: 523  QVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAP 582

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEIAW+D  VGK + D LSLLP+   
Sbjct: 583  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGA 642

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL+LAD KQ L+SKGVQ EF GG LRCG+Y+T+RKVGD+SQK   SG  Q
Sbjct: 643  APPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQ 702

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IVIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 703  IVIEGPLCEDYYKIRDYLYSQFYLL 727


>ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X1 [Glycine max]
          Length = 739

 Score =  898 bits (2320), Expect = 0.0
 Identities = 465/685 (67%), Positives = 541/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHADT H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQN+  +GKGEGIVI P+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVL SFVRPAVLITDAYNALNNQP RRQ  D+EF D++ +TLR  GNVLLP
Sbjct: 177  HRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQN-DKEFGDILKKTLRAGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDT GRVLEL+L LE YWA  +L YPI FLT VA+ST+D+VKSFLEWMSD+IAKSFE +R
Sbjct: 236  VDTVGRVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +N F LKY+ +L+++ ELD  P+GPKVVLASMASLE GFS DIF++WA+D KNLV+FTER
Sbjct: 296  ENIFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQF TLARMLQA+P PKAVKV VSKRVPL GEEL AYEEEQNR+K +EALKA+  KEE++
Sbjct: 356  GQFATLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIK-KEALKASLMKEEEL 414

Query: 1098 KSSFVSDN-TSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  +DN  SDPMVID                 +RD+  DGF+P S+S+AP+FP  E  
Sbjct: 415  KTSHGADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENT 474

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YVIK+ D                D  A  L+ DTK +KVVSDE TV
Sbjct: 475  SEWDDFGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTV 534

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             V+CSL Y+DFEGRSDGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVYAP
Sbjct: 535  QVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAP 594

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEIAW+D  VGK + D LSLLP+   
Sbjct: 595  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGA 654

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL+LAD KQ L+SKGVQ EF GG LRCG+Y+T+RKVGD+SQK   SG  Q
Sbjct: 655  APPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQ 714

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IVIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 715  IVIEGPLCEDYYKIRDYLYSQFYLL 739


>ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cucumis sativus]
          Length = 738

 Score =  897 bits (2317), Expect = 0.0
 Identities = 460/684 (67%), Positives = 542/684 (79%), Gaps = 9/684 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVLISH DT H+GALPYA+K+ GL AP++ TEPVYR GLLTMYD F++R+ VS       
Sbjct: 57   AVLISHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ VT L YSQN+ L+GKGEGIVI P+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGT+LESFVRPAVLITDAYNALNNQP RRQ  D+EF D I +TLR +GNVLLP
Sbjct: 177  HRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQK-DKEFGDTIQKTLRANGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+  LE YW +  L YPI FLT VA+ST+D++KSFLEWMSD+IAKSFEH+R
Sbjct: 236  VDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +NAF LK++ +L+++ ELD  P+GPKVVLASMASLE G+S DIF+DWA D KNLV+F+ER
Sbjct: 296  NNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVKVTVSKRVPL G+EL AYEEEQNR K EEALKA+  KEE  
Sbjct: 356  GQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQS 414

Query: 1098 KSSFVSDN-TSDPMVIDXXXXXXXXXXXXR---HRDVLCDGFIPSSSSIAPMFPFDEGLK 1265
            K+S  +DN T DPM+ID                +RD+L DGF+P S+ +APMFPF E   
Sbjct: 415  KASHGADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTS 474

Query: 1266 EWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTVH 1442
             WD++GEVI+P++YVIK+ D                D  A +L+ D K +KVVS+E+TV 
Sbjct: 475  AWDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQ 534

Query: 1443 VKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAPQ 1622
            VKCSL+Y+DFEGRSDGRSIKSI+ HVAPLKLVLVHG+AEATEHL+QHCLK    HVYAPQ
Sbjct: 535  VKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQ 594

Query: 1623 IEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVNDP 1799
            IEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEI W+D +VGK ++  LSLLPL   P
Sbjct: 595  IEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAP 654

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQI 1970
              HKSV VGDL++ADFKQ LASKG+Q EF GG LRCG+Y+T+RKV D+SQK   SG  Q+
Sbjct: 655  APHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQV 714

Query: 1971 VIEGPLTEEYFKIRQYLYSQFYVL 2042
            VIEGPL E+Y+KIR+ LYSQFY+L
Sbjct: 715  VIEGPLCEDYYKIRELLYSQFYLL 738


>ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X2 [Citrus sinensis]
          Length = 738

 Score =  893 bits (2307), Expect = 0.0
 Identities = 453/684 (66%), Positives = 538/684 (78%), Gaps = 9/684 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH DT H+GALPYA+K+ GL AP++ TEPVYR GLLTMYD +LSRR VS       
Sbjct: 57   AVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQNY L+GKGEGIV+ P+ AG LLGGTVWKI+KDGEDVIYAVD+N
Sbjct: 117  DDIDSAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
             RKE+HLNGTVLESFVRPAVLITDAYNAL+NQP R+Q   + F D I +TLR  GNVLLP
Sbjct: 177  RRKEKHLNGTVLESFVRPAVLITDAYNALHNQPPRQQR--EMFQDAISKTLRAGGNVLLP 234

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VD+AGRVLELLL LE YWA+H L YPI FLT V++ST+D+VKSFLEWM DSI KSFE SR
Sbjct: 235  VDSAGRVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSR 294

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF LK++ +L+++ ELD  P+GPK+VLASMASLE GFS DIF++WASD KNLV+FTER
Sbjct: 295  DNAFLLKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTER 354

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVKVT+S+RVPL GEEL AYEEEQ RLK EEALKA+  KEE+ 
Sbjct: 355  GQFGTLARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEES 414

Query: 1098 KSSFVSDN--TSDPMVID---XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S   DN  + DPMVID               R+RD+L DGF+P S+S+APMFPF E  
Sbjct: 415  KASLGPDNNLSGDPMVIDANNANASAVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENN 474

Query: 1263 KEWDEYGEVIDPENYVIKNDXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTVH 1442
             EWD++GEVI+P++Y+IK++                D  +  L+ D K +KVVS+E+TV 
Sbjct: 475  SEWDDFGEVINPDDYIIKDEDMDQAAMHIGGDDGKLDEGSASLILDAKPSKVVSNELTVQ 534

Query: 1443 VKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAPQ 1622
            VKC L ++D+EGR+DGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVY PQ
Sbjct: 535  VKCLLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQ 594

Query: 1623 IEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVNDP 1799
            IEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEIAW+D +VGK ++ MLSLLP+    
Sbjct: 595  IEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPA 654

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQI 1970
            P HKSV VGDL++AD K  L+SKG+Q EF GG LRCG+Y+T+RKVG + QK   SG  QI
Sbjct: 655  PPHKSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQI 714

Query: 1971 VIEGPLTEEYFKIRQYLYSQFYVL 2042
            VIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 715  VIEGPLCEDYYKIRAYLYSQFYLL 738


>ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citrus clementina]
            gi|568874619|ref|XP_006490411.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 2-like isoform
            X1 [Citrus sinensis] gi|557523821|gb|ESR35188.1|
            hypothetical protein CICLE_v10004414mg [Citrus
            clementina]
          Length = 739

 Score =  892 bits (2306), Expect = 0.0
 Identities = 453/685 (66%), Positives = 538/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH DT H+GALPYA+K+ GL AP++ TEPVYR GLLTMYD +LSRR VS       
Sbjct: 57   AVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQNY L+GKGEGIV+ P+ AG LLGGTVWKI+KDGEDVIYAVD+N
Sbjct: 117  DDIDSAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
             RKE+HLNGTVLESFVRPAVLITDAYNAL+NQP R+Q   + F D I +TLR  GNVLLP
Sbjct: 177  RRKEKHLNGTVLESFVRPAVLITDAYNALHNQPPRQQR--EMFQDAISKTLRAGGNVLLP 234

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VD+AGRVLELLL LE YWA+H L YPI FLT V++ST+D+VKSFLEWM DSI KSFE SR
Sbjct: 235  VDSAGRVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSR 294

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF LK++ +L+++ ELD  P+GPK+VLASMASLE GFS DIF++WASD KNLV+FTER
Sbjct: 295  DNAFLLKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTER 354

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVKVT+S+RVPL GEEL AYEEEQ RLK EEALKA+  KEE+ 
Sbjct: 355  GQFGTLARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEES 414

Query: 1098 KSSFVSDN--TSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEG 1259
            K+S   DN  + DPMVID                R+RD+L DGF+P S+S+APMFPF E 
Sbjct: 415  KASLGPDNNLSGDPMVIDANNANASADVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYEN 474

Query: 1260 LKEWDEYGEVIDPENYVIKNDXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
              EWD++GEVI+P++Y+IK++                D  +  L+ D K +KVVS+E+TV
Sbjct: 475  NSEWDDFGEVINPDDYIIKDEDMDQAAMHIGGDDGKLDEGSASLILDAKPSKVVSNELTV 534

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKC L ++D+EGR+DGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVY P
Sbjct: 535  QVKCLLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTP 594

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YEIAW+D +VGK ++ MLSLLP+   
Sbjct: 595  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTP 654

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL++AD K  L+SKG+Q EF GG LRCG+Y+T+RKVG + QK   SG  Q
Sbjct: 655  APPHKSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQ 714

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IVIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 715  IVIEGPLCEDYYKIRAYLYSQFYLL 739


>gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris]
          Length = 739

 Score =  892 bits (2305), Expect = 0.0
 Identities = 464/685 (67%), Positives = 538/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHAD  H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLVSHADILHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQ+VT L YSQN+ L GKGEGIVI P+ AG LLGGTVWKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGT L SFVRPAVLITDAYNALNNQP RRQ  D+EF D++ +TLR  GNVLLP
Sbjct: 177  HRKERHLNGTALGSFVRPAVLITDAYNALNNQPYRRQN-DKEFGDILKKTLRAGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LE YW+  +L YPI FLT VA+ST+D+VKSFLEWMSDSIAKSFE +R
Sbjct: 236  VDTAGRVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +N F LKYI +L+++ ELD  PEGPKVVLASMASLE GFS DIF++WA+D KNLV+FTER
Sbjct: 296  ENIFLLKYITLLINKTELDNAPEGPKVVLASMASLEAGFSHDIFVEWANDMKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQF TLARMLQA+P PKAVKV VSKRVPL GEEL AYEEEQNR+K +EALKA+  KEE++
Sbjct: 356  GQFATLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIK-KEALKASLMKEEEL 414

Query: 1098 KSSFVSD-NTSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  SD N SDPMV+D                 +RD+  DGF+P S+S+APMFP  E  
Sbjct: 415  KTSHGSDNNNSDPMVVDSGNNHVPPEVAGPRGGGYRDIYIDGFVPPSTSVAPMFPCYENT 474

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YVIK+ D                D  A  L+ DTK +KVVSDE TV
Sbjct: 475  LEWDDFGEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTV 534

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HV AP
Sbjct: 535  QVKCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVSAP 594

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            QI+ETIDVTSDL AYKV LSEKLMS+VLFKKLG+YE+AW+D  VGK + D LS+LP+   
Sbjct: 595  QIDETIDVTSDLCAYKVLLSEKLMSNVLFKKLGDYEVAWVDAVVGKTESDTLSVLPVSEA 654

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL+LAD KQ L+SKGVQ EF GG LRCG+Y+T+RKVGD++QK   SG  Q
Sbjct: 655  APPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQ 714

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IVIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 715  IVIEGPLCEDYYKIRDYLYSQFYLL 739


>gb|EXC19142.1| Cleavage and polyadenylation specificity factor subunit 2 [Morus
            notabilis]
          Length = 741

 Score =  890 bits (2299), Expect = 0.0
 Identities = 460/686 (67%), Positives = 544/686 (79%), Gaps = 11/686 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHADT H+GALPYA+K+FGL AP+Y TEPVYR GLLTMYD FL R+ VS       
Sbjct: 57   AVLLSHADTLHLGALPYAMKQFGLSAPVYSTEPVYRLGLLTMYDQFLWRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L Y+QN+ L+GKGEGIVI+P+ AG LLGGTVWKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQNVTRLTYAQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKE+HLNG    SFVRPAVLITDAYNALNNQP RRQ +D+EF D I +TLR DG VLLP
Sbjct: 177  HRKEKHLNGINPASFVRPAVLITDAYNALNNQPYRRQ-MDKEFTDTIKKTLRIDGKVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLELL  LE  WA+  L+YPI FLT VA+ST+D+VKSFLEWMSDSIAKSFE +R
Sbjct: 236  VDTAGRVLELLQILESCWAEESLSYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF LK++ +L+++ +L+  P+GPKVVLASMASLE GFS DIF++WA+D +NLV+FTER
Sbjct: 296  DNAFLLKHVTLLVNKTDLNNAPDGPKVVLASMASLEAGFSHDIFVEWATDARNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVKVT+SKRVPL GEEL AYEEEQNR+K EEALKA+  KEE+ 
Sbjct: 356  GQFGTLARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKREEALKASLIKEEES 415

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXRH----RDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  +D N SDPMVID             H    RDV  DGF+PSS+S+APMFPF E  
Sbjct: 416  KASHGTDINISDPMVIDASITNPLPDVAGPHSGGYRDVFIDGFVPSSTSVAPMFPFFETT 475

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P+NY+IK+ D                D  +  L+ DTK +KV+S+E+TV
Sbjct: 476  SEWDDFGEVINPDNYIIKDEDMDQGAMHVSGDMDGKLDEASASLILDTKPSKVISNELTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSD RSIKSI+ H+APLKLVLVHG+AEATEHL+QHC+KQ   HVYAP
Sbjct: 536  PVKCSLLYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCIKQVCPHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVND 1796
            QIEETID+TSDL AYKVQLSEKLMS+VLFKKLG++E AW+D +VGK ++  LSLLPL + 
Sbjct: 596  QIEETIDITSDLCAYKVQLSEKLMSNVLFKKLGDHETAWVDSEVGKTENGTLSLLPLSSA 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFM-GGHLRCGDYITVRKVGDSSQKS---GVH 1964
             P HKSV VGDL++A+FKQ LA  GVQ EF  GG LRCG+Y+T+RKVGD+S K    G  
Sbjct: 656  APPHKSVLVGDLKMANFKQFLADNGVQVEFAGGGALRCGEYVTLRKVGDASHKGGGPGTQ 715

Query: 1965 QIVIEGPLTEEYFKIRQYLYSQFYVL 2042
            QIVIEGPL EEY+KIR+YLYSQF++L
Sbjct: 716  QIVIEGPLCEEYYKIREYLYSQFFLL 741


>ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Solanum lycopersicum]
          Length = 739

 Score =  887 bits (2291), Expect = 0.0
 Identities = 456/685 (66%), Positives = 540/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVLISH+DT H+GALPYA+K+ GL APIY TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLISHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L YSQN+ ++GKGEGIVI P  AG LLGGT W+I+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVLESFVRPAVLITDA+NALNNQP RRQ  DQEFLD I RTL   GNVLLP
Sbjct: 177  HRKERHLNGTVLESFVRPAVLITDAFNALNNQPPRRQR-DQEFLDAIERTLNVGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LEQ+W +  L+ PI FL+ V++ST+D+VKSFLEWMSDSIAKSFEH+R
Sbjct: 236  VDTAGRVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF L+ I +++++  L+  P GPKVV+ASMASLE GFS D+F++WA+DPKNLV+FTER
Sbjct: 296  DNAFLLRKIKLVINKSALEEAP-GPKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTER 354

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLAR+LQ++P PKAVKVT+S+R+PL GEEL AYEEEQNR+K EEALKA   KEE+ 
Sbjct: 355  GQFGTLARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEES 414

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXRH----RDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  ++  T DPM +D             H    +DVL DGF+ +SSSIAPMFPF +  
Sbjct: 415  KASVGAEVVTDDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSIAPMFPFYDNT 474

Query: 1263 KEWDEYGEVIDPENYVIKND-XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YV+K+D                 D  + +L+ DT  +KV S E+TV
Sbjct: 475  SEWDDFGEVINPDDYVVKDDNMEQSFMHVDGDLNGKLDEGSANLILDTTPSKVESSELTV 534

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRSIKSI+ HVAPLKLVLVHGSAEATEHL+QHCLK     VYAP
Sbjct: 535  QVKCSLLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAP 594

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            Q+EETIDVTSDL AYKVQLSEKLMS VLFKKLG+YEIAW+D +VGK + DM SLLPL   
Sbjct: 595  QLEETIDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGP 654

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQKSG---VHQ 1967
             P HK+V VGDL+++DFKQ LASKGVQ EF GG LRCG+Y+T+RKVGD+SQK G   + Q
Sbjct: 655  SPPHKTVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQ 714

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IV+EGPL+EEY+KIR+YLYS FY L
Sbjct: 715  IVLEGPLSEEYYKIREYLYSHFYSL 739


>ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 738

 Score =  887 bits (2291), Expect = 0.0
 Identities = 457/684 (66%), Positives = 536/684 (78%), Gaps = 9/684 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHADT H+GALPYA+K+ GL AP+Y TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLLSHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 +FQ+VT L YSQN+  +GKGEGIVI P+ AG LLGGT+WKI+KDGEDVIYAVDFN
Sbjct: 117  DDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVL SFVRPAVLITDAYNALNNQP RRQ  D+EF D++ +TLR  GNVLLP
Sbjct: 177  HRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQN-DKEFGDILKKTLREGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDT GRVLEL+L LE YW   +L YPI FLT VA+ST+D+VKSFLEWMSD+IAKSFE +R
Sbjct: 236  VDTVGRVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            +N F LKY+ +L+++ ELD  P+GPKVVLASMASLE GFS +IF++WA+D KNLV+FTER
Sbjct: 296  ENIFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQF TLARMLQA+P PKAVKV VSKRV L GEEL AYEEEQNR+K +EALKA+  KEE+ 
Sbjct: 356  GQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIK-KEALKASLMKEEEF 414

Query: 1098 KSSFVSD-NTSDPMVID----XXXXXXXXXXXXRHRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  +D NTSD MVID                 +RD+  DGF+P  +S+APMFP  E  
Sbjct: 415  KTSHGADNNTSDSMVIDSGNNHVPPEVSGPRGGGYRDIFIDGFVPPLTSVAPMFPCYENT 474

Query: 1263 KEWDEYGEVIDPENYVIKNDXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTVH 1442
             EWD++GEVI+P++YVIK++                D  A  L+ DTK +KVVSDE TV 
Sbjct: 475  SEWDDFGEVINPDDYVIKDEDMDQTAMHGGDINGKLDEGAASLILDTKPSKVVSDERTVQ 534

Query: 1443 VKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAPQ 1622
            V+CSL Y+DFEGRSDGRSIK+I+ HVAPLKLVLVHGSAEATEHL+QHCLK    HVYAPQ
Sbjct: 535  VRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQ 594

Query: 1623 IEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVNDP 1799
            +EETIDVTSDL AYKV LSEKLMS+VLFKKLG+YE+AW+D  VGK + D LSLLP+    
Sbjct: 595  LEETIDVTSDLCAYKVLLSEKLMSNVLFKKLGDYELAWVDAVVGKTENDPLSLLPVSGAA 654

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQI 1970
            P HKSV VGDL+LAD KQ L+SKGVQ EF GG LRCG+Y+T+RKVGD+SQK   SG  QI
Sbjct: 655  PPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQI 714

Query: 1971 VIEGPLTEEYFKIRQYLYSQFYVL 2042
            VIEGPL E+Y+KIR YLYSQFY+L
Sbjct: 715  VIEGPLCEDYYKIRDYLYSQFYLL 738


>ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Solanum tuberosum]
          Length = 739

 Score =  882 bits (2280), Expect = 0.0
 Identities = 453/685 (66%), Positives = 540/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVLISH+DT H+GALPYA+K+ GL APIY TEPVYR GLLTMYD +LSR+ VS       
Sbjct: 57   AVLISHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNVT L YSQN+ ++GKGEGIVI P  AG LLGGT W+I+KDGEDVIYAVDFN
Sbjct: 117  DDIDSAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVLESFVRPAVLITDA+NALNNQP RRQ  DQEFLD I RT+   GNVLLP
Sbjct: 177  HRKERHLNGTVLESFVRPAVLITDAFNALNNQPPRRQR-DQEFLDAIERTVNVGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLEL+L LEQ+W +  L+ PI FL+ V++ST+D+VKSFLEWMSDSIAKSFEH+R
Sbjct: 236  VDTAGRVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF L+ I +++++  L+  P G KVV+ASMASLE GFS D+F++WA+DPKNLV+FTER
Sbjct: 296  DNAFLLRKIKLVINKSALEEAP-GSKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTER 354

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLAR+LQ++P PKAVKVT+S+R+PL GEEL AYEEEQNR+K EEALKA   KEE+ 
Sbjct: 355  GQFGTLARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEES 414

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXRH----RDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K+S  ++  T+DPM +D             H    +DVL DGF+ +SSS+APMFPF +  
Sbjct: 415  KASVGAEVVTNDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSVAPMFPFYDNT 474

Query: 1263 KEWDEYGEVIDPENYVIKND-XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWD++GEVI+P++YV+K+D                 D  + +L+ DT  +KV S E+TV
Sbjct: 475  SEWDDFGEVINPDDYVVKDDNMEQSLMHVDGDLNGKLDEGSANLILDTTPSKVESSELTV 534

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRSIKSI+ HVAPLKLVLVHGSAEATEHL+QHCLK     VYAP
Sbjct: 535  QVKCSLLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAP 594

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKND-DMLSLLPLVND 1796
            Q+EETIDVTSDL AYKVQLSEKLMS VLFKKLG+YEIAW+D +VGK + DM SLLPL   
Sbjct: 595  QLEETIDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGP 654

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQKSG---VHQ 1967
             P HK+V VGDL+++DFKQ LASKGVQ EF GG LRCG+Y+T+RKVGD+SQK G   + Q
Sbjct: 655  APPHKTVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQ 714

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            IV+EGPL+EEY+KIR+YLYS FY L
Sbjct: 715  IVLEGPLSEEYYKIREYLYSHFYSL 739


>ref|XP_006369487.1| Cleavage and polyadenylation specificity factor family protein
            [Populus trichocarpa] gi|550348036|gb|ERP66056.1|
            Cleavage and polyadenylation specificity factor family
            protein [Populus trichocarpa]
          Length = 740

 Score =  882 bits (2278), Expect = 0.0
 Identities = 453/685 (66%), Positives = 541/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+S+ D  H+GALP+A+K+FGL AP++ TEPVYR GLLTMYD   SR++VS       
Sbjct: 57   AVLLSYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQN T L YSQN+ L+GKGEGIVI P+ AG LLGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDSAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVLESF RPAVLITDAYNALN+QPSR+Q  D++FL+ IL+TL G GNVLLP
Sbjct: 177  HRKERHLNGTVLESFYRPAVLITDAYNALNSQPSRQQR-DKQFLETILKTLEGGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VD+AGRVLELLL LEQ+W +  L YPI FL+ V++ST+D++KSFLEWMSDSIAKSFE SR
Sbjct: 236  VDSAGRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF +K++ +L+S+ ELD    GPKVVLAS+ASLE GFS DIF +WA+D KNLV+FTER
Sbjct: 296  DNAFLMKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVK+T+S+RVPL G+EL AYEEEQ RLK EE LKA+  KEE+ 
Sbjct: 356  GQFGTLARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEES 415

Query: 1098 KSSFVSDNT-SDPMVIDXXXXXXXXXXXXR----HRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K S   DN  SDPMVID                 HRD+L DGF+P S+S+APMFPF E  
Sbjct: 416  KVSHGPDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENS 475

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWDE+GEVI+P++YV+++ D                D  +  L+ DTK +KVVS+E+TV
Sbjct: 476  LEWDEFGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+D+EGRSDGRSIKSI+ HVAPLKLV+VHGSAEATEHL+QH L      VYAP
Sbjct: 536  QVKCSLIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YE+AW+D +VGK ++ MLSLLP+ + 
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSP 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL++ADFKQ LASKGVQ EF GG LRCG+Y+T+RKVG+ SQK   SG  Q
Sbjct: 656  APPHKSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGTSGTQQ 715

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            I+IEGPL E+Y+KIR+YLYSQFY+L
Sbjct: 716  IIIEGPLCEDYYKIREYLYSQFYLL 740


>ref|XP_002330904.1| predicted protein [Populus trichocarpa]
          Length = 740

 Score =  882 bits (2278), Expect = 0.0
 Identities = 453/685 (66%), Positives = 541/685 (78%), Gaps = 10/685 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+S+ D  H+GALP+A+K+FGL AP++ TEPVYR GLLTMYD   SR++VS       
Sbjct: 57   AVLLSYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQN T L YSQN+ L+GKGEGIVI P+ AG LLGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDSAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGTVLESF RPAVLITDAYNALN+QPSR+Q  D++FL+ IL+TL G GNVLLP
Sbjct: 177  HRKERHLNGTVLESFYRPAVLITDAYNALNSQPSRQQR-DKQFLETILKTLEGGGNVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VD+AGRVLELLL LEQ+W +  L YPI FL+ V++ST+D++KSFLEWMSDSIAKSFE SR
Sbjct: 236  VDSAGRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF +K++ +L+S+ ELD    GPKVVLAS+ASLE GFS DIF +WA+D KNLV+FTER
Sbjct: 296  DNAFLMKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTER 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQA+P PKAVK+T+S+RVPL G+EL AYEEEQ RLK EE LKA+  KEE+ 
Sbjct: 356  GQFGTLARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEES 415

Query: 1098 KSSFVSDNT-SDPMVIDXXXXXXXXXXXXR----HRDVLCDGFIPSSSSIAPMFPFDEGL 1262
            K S   DN  SDPMVID                 HRD+L DGF+P S+S+APMFPF E  
Sbjct: 416  KVSHGPDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENS 475

Query: 1263 KEWDEYGEVIDPENYVIKN-DXXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
             EWDE+GEVI+P++YV+++ D                D  +  L+ DTK +KVVS+E+TV
Sbjct: 476  LEWDEFGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+D+EGRSDGRSIKSI+ HVAPLKLV+VHGSAEATEHL+QH L      VYAP
Sbjct: 536  QVKCSLIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDD-MLSLLPLVND 1796
            QIEETIDVTSDL AYKVQLSEKLMS+VLFKKLG+YE+AW+D +VGK ++ MLSLLP+ + 
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSP 655

Query: 1797 PPLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK---SGVHQ 1967
             P HKSV VGDL++ADFKQ LASKGVQ EF GG LRCG+Y+T+RKVG+ SQK   SG  Q
Sbjct: 656  APPHKSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGASGTQQ 715

Query: 1968 IVIEGPLTEEYFKIRQYLYSQFYVL 2042
            I+IEGPL E+Y+KIR+YLYSQFY+L
Sbjct: 716  IIIEGPLCEDYYKIREYLYSQFYLL 740


>ref|NP_001063978.1| Os09g0569400 [Oryza sativa Japonica Group]
            gi|75253249|sp|Q652P4.1|CPSF2_ORYSJ RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 2; AltName: Full=Cleavage and polyadenylation
            specificity factor 100 kDa subunit; Short=CPSF 100 kDa
            subunit gi|52077178|dbj|BAD46223.1| putative cleavage and
            polyadenylation specificity factor [Oryza sativa Japonica
            Group] gi|113632211|dbj|BAF25892.1| Os09g0569400 [Oryza
            sativa Japonica Group]
          Length = 738

 Score =  881 bits (2276), Expect = 0.0
 Identities = 446/683 (65%), Positives = 539/683 (78%), Gaps = 8/683 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SHADT H+GALPYA+K  GL AP+Y TEPV+R G+LT+YD+F+SRR VS       
Sbjct: 57   AVLLSHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNV  LKYSQN+ L  KGEGIVI P+ AG  LGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGT L SFVRPAVLITDAYNALNN   +RQ  DQ+F+D +++ L G G+VLLP
Sbjct: 177  HRKERHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQ-DQDFIDALVKVLTGGGSVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            +DTAGRVLE+LL LEQYWA+ HL YPI FLTNV+TSTVD+VKSFLEWM+DSI+KSFEH+R
Sbjct: 236  IDTAGRVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF LK +  ++++ EL+++ + PKVVLASMASLE GFS DIF+D A++ KNLV+FTE+
Sbjct: 296  DNAFLLKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEK 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQ +P PKAVKVT+SKR+PL G+ELKAYEEEQ R+K EEALKA+ +KEE+ 
Sbjct: 356  GQFGTLARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEK 415

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXR---HRDVLCDGFIPSSSSIAPMFPFDEGLK 1265
            K+S  S+   SDPMVID            +   + D+L DGF+P SSS+APMFPF E   
Sbjct: 416  KASLGSNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTS 475

Query: 1266 EWDEYGEVIDPENYVIKND--XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
            EWD++GEVI+PE+Y++K +                  D  +  LL D+  +KV+S+E+TV
Sbjct: 476  EWDDFGEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRS+KS+I HVAPLKLVLVHGSAEATEHL+ HC K S  HVYAP
Sbjct: 536  QVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDDMLSLLPLVNDP 1799
            QIEETIDVTSDL AYKVQLSEKLMS+V+ KKLGE+EIAW+D +VGK DD L+LLP  + P
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDDKLTLLPPSSTP 655

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK--SGVHQIV 1973
              HKSV VGDL+LADFKQ LA+KG+Q EF GG LRCG+YIT+RK+GD+ QK  +G  QIV
Sbjct: 656  AAHKSVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQKGSTGSQQIV 715

Query: 1974 IEGPLTEEYFKIRQYLYSQFYVL 2042
            IEGPL E+Y+KIR+ LYSQFY+L
Sbjct: 716  IEGPLCEDYYKIRELLYSQFYLL 738


>ref|XP_003565596.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Brachypodium distachyon]
          Length = 738

 Score =  874 bits (2259), Expect = 0.0
 Identities = 441/683 (64%), Positives = 540/683 (79%), Gaps = 8/683 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH D  H+GALPYA+K  GL AP+Y TEPV+R GLLTMYD+FLSR  V+       
Sbjct: 57   AVLLSHPDIMHLGALPYAMKHLGLSAPVYATEPVFRLGLLTMYDYFLSRWQVADFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNV  LKYSQN+ L  KGEGIVI P+ +G LLGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVSGHLLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGT L SFVRPAVLITDAYNALNNQ  +RQ  DQ+F+D +++ L   G+VLLP
Sbjct: 177  HRKERHLNGTALGSFVRPAVLITDAYNALNNQVYKRQQ-DQDFIDSMVKVLASGGSVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLELLL +EQYWA+ HL YPI FLTNV+TSTVD+VKSFLEWMSDSI+KSFEH+R
Sbjct: 236  VDTAGRVLELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF L+Y++++++++EL+++ + PKVVLASMASLE GFS DIF++ A++ KNLV+FTE+
Sbjct: 296  DNAFLLRYVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEK 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQ +P PKAVKVT+ KR+PL G+ELKAYEEEQ R+K EE LKA+ SK+E++
Sbjct: 356  GQFGTLARMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEEL 415

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXR---HRDVLCDGFIPSSSSIAPMFPFDEGLK 1265
            K+S  S+   SDPMV+D                + D+L DGF+PS++S APMFPF E   
Sbjct: 416  KASHGSNAKASDPMVVDASSSRKSSNAGSHVGGNVDILIDGFVPSTTSFAPMFPFFENTA 475

Query: 1266 EWDEYGEVIDPENYVIKND--XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
            +WD++GEVI+P++Y++K D                  D  +  LL D+  +KV+S+E+TV
Sbjct: 476  DWDDFGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRS+KS+I HVAPLKLVLVHGSAEATEHL+ HC K S  HVYAP
Sbjct: 536  QVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDDMLSLLPLVNDP 1799
            QIEETIDVTSDL AYKVQLSEKLMS+V+ KKLGE+EIAW+D +VGK D+ L+LLP  + P
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTP 655

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQK--SGVHQIV 1973
              HKSV VGDL+LADFKQ LA+KG+Q EF GG LRCG+YITVRK+GDS+QK  +G  QIV
Sbjct: 656  SAHKSVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTGSQQIV 715

Query: 1974 IEGPLTEEYFKIRQYLYSQFYVL 2042
            IEGPL E+Y+KIR+ LYSQF++L
Sbjct: 716  IEGPLCEDYYKIRELLYSQFFLL 738


>ref|XP_003578687.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Brachypodium distachyon]
          Length = 738

 Score =  873 bits (2255), Expect = 0.0
 Identities = 440/683 (64%), Positives = 539/683 (78%), Gaps = 8/683 (1%)
 Frame = +3

Query: 18   AVLISHADTSHIGALPYAVKKFGLCAPIYCTEPVYRTGLLTMYDHFLSRRSVSXXXXXXX 197
            AVL+SH D  H+GALPYA+K  GL AP+Y TEPV+R GLLTMYD+FLSR  V+       
Sbjct: 57   AVLLSHPDIMHLGALPYAMKHLGLSAPVYVTEPVFRLGLLTMYDYFLSRWQVADFDLFTL 116

Query: 198  XXXXXAFQNVTSLKYSQNYDLAGKGEGIVITPYAAGRLLGGTVWKISKDGEDVIYAVDFN 377
                 AFQNV  LKYSQN+ L  KGEGIVI P+ +G LLGGTVWKI+KDGEDV+YAVDFN
Sbjct: 117  DDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVSGHLLGGTVWKITKDGEDVVYAVDFN 176

Query: 378  HRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQTIDQEFLDMILRTLRGDGNVLLP 557
            HRKERHLNGT L SFVRPAVLITDAYNALNNQ  +RQ  DQ+F+D +++ L   G+VLLP
Sbjct: 177  HRKERHLNGTALGSFVRPAVLITDAYNALNNQVYKRQQ-DQDFIDSMVKVLASGGSVLLP 235

Query: 558  VDTAGRVLELLLCLEQYWAKHHLTYPIAFLTNVATSTVDFVKSFLEWMSDSIAKSFEHSR 737
            VDTAGRVLELLL +EQYWA+ HL YPI FLTNV+TSTVD+VKSFLEWMSDSI+KSFEH+R
Sbjct: 236  VDTAGRVLELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTR 295

Query: 738  DNAFQLKYINVLLSRKELDRMPEGPKVVLASMASLEEGFSRDIFIDWASDPKNLVIFTER 917
            DNAF L+Y++++++++EL+++ + PKVVLASMASLE GFS DIF++ A++ KNLV+FTE+
Sbjct: 296  DNAFLLRYVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEK 355

Query: 918  GQFGTLARMLQAEPAPKAVKVTVSKRVPLRGEELKAYEEEQNRLKMEEALKANCSKEEDI 1097
            GQFGTLARMLQ +P PKAVKVT+ KR+PL G+ELKAYEEEQ R+K EE LKA+ SK+E++
Sbjct: 356  GQFGTLARMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEEL 415

Query: 1098 KSSFVSD-NTSDPMVIDXXXXXXXXXXXXR---HRDVLCDGFIPSSSSIAPMFPFDEGLK 1265
            K+S  S+   SDPMV+D                + D+L DGF+PS++S+APMFPF E   
Sbjct: 416  KASHGSNAKASDPMVVDASSSRKSSNAGSHVGGNVDILIDGFVPSTTSVAPMFPFFENTA 475

Query: 1266 EWDEYGEVIDPENYVIKND--XXXXXXXXXXXXXXXXDNKAGDLLADTKATKVVSDEVTV 1439
            +WD++GEVI+P++Y++K D                  D  +  LL D+  +KV+S+E+TV
Sbjct: 476  DWDDFGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTV 535

Query: 1440 HVKCSLNYVDFEGRSDGRSIKSIIGHVAPLKLVLVHGSAEATEHLRQHCLKQSTSHVYAP 1619
             VKCSL Y+DFEGRSDGRS+KS+I HVAPLKLVLVHGSAEATEHL+ HC K S  HVYAP
Sbjct: 536  QVKCSLVYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAP 595

Query: 1620 QIEETIDVTSDLSAYKVQLSEKLMSSVLFKKLGEYEIAWIDGQVGKNDDMLSLLPLVNDP 1799
            QIEETIDVTSDL AYKVQLSEKLMS+V+ KKLGE+EIAW+D +VGK D+ L+LLP  + P
Sbjct: 596  QIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTP 655

Query: 1800 PLHKSVFVGDLRLADFKQLLASKGVQAEFMGGHLRCGDYITVRKVGDSSQKSGV--HQIV 1973
              HKSV VGDL+LADFKQ LA+KG+Q EF GG LRCG+YITVRK+GDS+QK      QIV
Sbjct: 656  SAHKSVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTVSQQIV 715

Query: 1974 IEGPLTEEYFKIRQYLYSQFYVL 2042
            IEGPL E+Y+KIR+ LYSQF++L
Sbjct: 716  IEGPLCEDYYKIRELLYSQFFLL 738