BLASTX nr result
ID: Ephedra28_contig00011966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00011966
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, part... 60 2e-07
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop... 57 3e-06
ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis... 57 3e-06
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana] 56 4e-06
ref|XP_004247211.1| PREDICTED: protein OSB2, chloroplastic-like ... 56 6e-06
ref|XP_006349739.1| PREDICTED: protein OSB2, chloroplastic-like ... 55 1e-05
>ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, partial [Capsella rubella]
gi|482551352|gb|EOA15545.1| hypothetical protein
CARUB_v10004988mg, partial [Capsella rubella]
Length = 394
Score = 60.5 bits (145), Expect = 2e-07
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Frame = -2
Query: 442 AGSLRQCVSLFPRKTTLMHSIPISSLRTLCSSARTPL--PESIKLDNRYANLVKLVGVIE 269
+G RQ + ++ + + T+ ++ L P I +N AN V L+G +
Sbjct: 76 SGGKRQRAKAPAKTPEVVTPVKTPEIATVTATTENELGRPNEIAFENEVANWVNLIGFVN 135
Query: 268 EPIKPIVTNYGKLCAETVLR----VDSTRF--NLVFEETLVKIAMGYFNQFDEVYVSGSL 107
+P++ ++ GK A TV+ DS F ++FE L K A Y N+ D+++VSG L
Sbjct: 136 QPVQFEASSDGKFWAGTVISQRSGSDSAAFWIPIIFEGDLAKTAARYINKDDQIHVSGKL 195
Query: 106 FSIQDKDKRHLY-----KVLVNTLNYIKSRSTDVVSKQS 5
F I Y +VLV LN++K S +V S
Sbjct: 196 F-IDSPPPNMTYAQANVQVLVQNLNFLKPTSPSIVISSS 233
>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Frame = -2
Query: 409 PRKTTLMHSIPISSLRTLCSSARTPLPESIKLDNRYANLVKLVGVIEEPIKPIVTNYGKL 230
P T + + I+S+ T + P P I ++ AN V L+G +++P++ ++ GK
Sbjct: 63 PEAVTPVKPLEIASV-TATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKF 121
Query: 229 CAETVL----RVDSTRF--NLVFEETLVKIAMGYFNQFDEVYVSGSLFSIQDKDKRHLY- 71
A TV+ DS+ F ++FE L K A Y ++ D+++VSG LF I Y
Sbjct: 122 WAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLF-IDSPPPNMTYA 180
Query: 70 ----KVLVNTLNYIKSRS 29
+VLV LN+I+ S
Sbjct: 181 QANVQVLVQNLNFIQPMS 198
>ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
Full=Protein OSB2, chloroplastic; AltName:
Full=Organellar single-stranded DNA-binding protein 2;
AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
9; Flags: Precursor gi|2827655|emb|CAA16609.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein
[Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Frame = -2
Query: 409 PRKTTLMHSIPISSLRTLCSSARTPLPESIKLDNRYANLVKLVGVIEEPIKPIVTNYGKL 230
P T + + I+S+ T + P P I ++ AN V L+G +++P++ ++ GK
Sbjct: 63 PEAVTPVKPLEIASV-TATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKF 121
Query: 229 CAETVL----RVDSTRF--NLVFEETLVKIAMGYFNQFDEVYVSGSLFSIQDKDKRHLY- 71
A TV+ DS+ F ++FE L K A Y ++ D+++VSG LF I Y
Sbjct: 122 WAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLF-IDSPPPNMTYA 180
Query: 70 ----KVLVNTLNYIKSRS 29
+VLV LN+I+ S
Sbjct: 181 QANVQVLVQNLNFIQPMS 198
>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 56.2 bits (134), Expect = 4e-06
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Frame = -2
Query: 409 PRKTTLMHSIPISSLRTLCSSARTPLPESIKLDNRYANLVKLVGVIEEPIKPIVTNYGKL 230
P T + + I+S+ T + P P I ++ AN V L+G +++P++ ++ GK
Sbjct: 63 PEAVTPVKPLEIASV-TATTENELPRPNEIAYESEAANWVNLIGFVDQPVQFEASSDGKF 121
Query: 229 CAETVL----RVDSTRF--NLVFEETLVKIAMGYFNQFDEVYVSGSLFSIQDKDKRHLY- 71
A TV+ DS+ F ++FE L K A Y ++ D+++VSG LF I Y
Sbjct: 122 WAGTVISQRSASDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLF-IDSPPPNMTYA 180
Query: 70 ----KVLVNTLNYIKSRS 29
+VLV LN+I+ S
Sbjct: 181 QANVQVLVQNLNFIQPMS 198
>ref|XP_004247211.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum lycopersicum]
Length = 299
Score = 55.8 bits (133), Expect = 6e-06
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Frame = -2
Query: 337 PLPESIKLDNRYANLVKLVGVIEEPIKPIVTNYGKLCAETVLRV-----DSTRFNLVFEE 173
P P ++ N V+L+G + P++ N GK+ A T L V D+T NL F +
Sbjct: 76 PRPSEVQWKKELCNSVQLIGNVAVPVQIKHLNSGKVVAWTRLAVRKSQNDTTWINLTFWD 135
Query: 172 TLVKIAMGYFNQFDEVYVSGSLFSI----QDKDKRHLYKVLVNTLNYIKSRSTDVVS 14
L +A + + ++YVSG L S D ++ YKV+V LN+I+ S + S
Sbjct: 136 DLANVANQHVEKGQQIYVSGRLISDTVEGDDGKEQTYYKVVVQQLNFIEKSSPPIAS 192
>ref|XP_006349739.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum tuberosum]
Length = 300
Score = 55.1 bits (131), Expect = 1e-05
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Frame = -2
Query: 337 PLPESIKLDNRYANLVKLVGVIEEPIKPIVTNYGKLCAETVLRV-----DSTRFNLVFEE 173
P P ++ N V+L+G + P++ N GK+ A T L V D+T NL F +
Sbjct: 77 PRPSEVQWKKELCNSVQLIGNVAVPVQIKHLNSGKVVAWTRLAVRKSQNDTTWINLTFWD 136
Query: 172 TLVKIAMGYFNQFDEVYVSGSLFSI----QDKDKRHLYKVLVNTLNYIKSRSTDVVS 14
L +A + + ++YVSG L S D ++ YKV+V LN+++ S + S
Sbjct: 137 DLANVANQHVEKGQQIYVSGRLISDTVEGDDGKEQTYYKVVVQQLNFVEKNSPPMAS 193