BLASTX nr result
ID: Ephedra28_contig00011871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00011871 (686 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABY61019.1| mini zinc finger 1 [Welwitschia mirabilis] 59 1e-06 gb|ABR16769.1| unknown [Picea sitchensis] 58 3e-06 >gb|ABY61019.1| mini zinc finger 1 [Welwitschia mirabilis] Length = 184 Score = 58.9 bits (141), Expect = 1e-06 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 8/93 (8%) Frame = -2 Query: 577 MDLGMSREVQVSISMPSSNIQDAQTNRIHHQIYSTKAFGIVEGMCTPTPAIYHHA----- 413 MDLG+ REVQVSI MPS IQD + QIY+ K+ G EGMC P P + H Sbjct: 1 MDLGIHREVQVSIPMPSGYIQDPSRMQ---QIYN-KSLGFGEGMCAP-PLVQHQVMRPPH 55 Query: 412 NEVNRPQPHHVPEMTN---VVPPPRSRDEIRPH 323 ++++ P+ P N V PP R+++R H Sbjct: 56 HQIHDQSPNSAPRPNNSAAVAVPPSVREDLRAH 88 >gb|ABR16769.1| unknown [Picea sitchensis] Length = 173 Score = 57.8 bits (138), Expect = 3e-06 Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 9/101 (8%) Frame = -2 Query: 577 MDLGMSREVQVSISMPSSNIQDAQTNRIHHQIYSTKAFGIVEGMCTPTPAIYHHANEVNR 398 MDLGM+REVQVSI MPS+ Q Q + QIY+ K GIVEGM P + Sbjct: 1 MDLGMNREVQVSIPMPSNYHQTIQESSRLQQIYA-KTLGIVEGMSPPEDL---RSQVQGM 56 Query: 397 PQPHHVPEMTNVV---PPPRSRDEIR------PHHMPEMTN 302 PHHV E T PPP +++R H P+ N Sbjct: 57 RPPHHVHETTAAARPGPPPPVHEDMRTQQHQQQQHYPQENN 97