BLASTX nr result

ID: Ephedra28_contig00011839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011839
         (470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24041.1| unknown [Picea sitchensis]                              61   2e-07
gb|ABK25354.1| unknown [Picea sitchensis]                              59   7e-07

>gb|ABK24041.1| unknown [Picea sitchensis]
          Length = 319

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
 Frame = -2

Query: 340 MASGSCSLTRSAIVTAAPLQK--SVAFHCASSPSVQRTFLASSA--LRGSWSLRNLTPTK 173
           MASG C L  + +     LQK   V  H   +     T +       R S S R +   +
Sbjct: 1   MASGCCCLLSTGVAVLINLQKLDPVQSHSPFAVHHVTTLMPRKRDRFRSSLSSRVVFQCR 60

Query: 172 NLKP--HRLLTHKVAVSTEPVEQIPID---ERVIKVHTIADFEETLKLAKDKLVVVEYAA 8
             KP   R ++ + A+S+E +    ID   ERV+KVHT+ +F+E L+LA++KLVVVEYAA
Sbjct: 61  TQKPIGSRFIS-RAALSSEQLTGNGIDIKDERVLKVHTVHEFDEALRLAENKLVVVEYAA 119

Query: 7   SH 2
           SH
Sbjct: 120 SH 121


>gb|ABK25354.1| unknown [Picea sitchensis]
          Length = 319

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
 Frame = -2

Query: 340 MASGSCSLTRSAIVTAAPLQK--SVAFHCASSPSVQRTFLASSA--LRGSWSLRNLTPTK 173
           MASG C L  + +     LQK   V  H   +     T +       R S S R +   +
Sbjct: 1   MASGCCCLLSTGVAVLINLQKLDPVQSHSPFAVHHVTTLMPRKRDRFRSSLSSRVVFQCR 60

Query: 172 NLKP--HRLLTHKVAVSTEPVEQIPID---ERVIKVHTIADFEETLKLAKDKLVVVEYAA 8
             KP   R ++ + A+ +E +    ID   ERV+KVHT+ +F+E L+LA++KLVVVEYAA
Sbjct: 61  TQKPIGSRFIS-RAALRSEQLTGNGIDIKDERVLKVHTVHEFDEALRLAENKLVVVEYAA 119

Query: 7   SH 2
           SH
Sbjct: 120 SH 121


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