BLASTX nr result

ID: Ephedra28_contig00011838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011838
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24041.1| unknown [Picea sitchensis]                              59   9e-07
gb|ABK25354.1| unknown [Picea sitchensis]                              57   2e-06

>gb|ABK24041.1| unknown [Picea sitchensis]
          Length = 319

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
 Frame = +1

Query: 124 MASGSCSLTRSAIVTAAPLQK--SVAFHCTSSPSVQRTFLASSA--LRGSWSLRNLTPAK 291
           MASG C L  + +     LQK   V  H   +     T +       R S S R +   +
Sbjct: 1   MASGCCCLLSTGVAVLINLQKLDPVQSHSPFAVHHVTTLMPRKRDRFRSSLSSRVVFQCR 60

Query: 292 NLKP--HRLLTHKVPVSTEPVEQIPID---ERVIKVHNIAEFEETLKLAKDKLVVVEYAA 456
             KP   R ++ +  +S+E +    ID   ERV+KVH + EF+E L+LA++KLVVVEYAA
Sbjct: 61  TQKPIGSRFIS-RAALSSEQLTGNGIDIKDERVLKVHTVHEFDEALRLAENKLVVVEYAA 119

Query: 457 SH 462
           SH
Sbjct: 120 SH 121


>gb|ABK25354.1| unknown [Picea sitchensis]
          Length = 319

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
 Frame = +1

Query: 124 MASGSCSLTRSAIVTAAPLQK----------SVAFHCTSSPSVQRTFLASSALRGSWSLR 273
           MASG C L  + +     LQK          +V    T  P  +  F +S + R  +  R
Sbjct: 1   MASGCCCLLSTGVAVLINLQKLDPVQSHSPFAVHHVTTLMPRKRDRFRSSLSSRVVFQCR 60

Query: 274 NLTPAKNLKPHRLLTHKVPVSTEPVEQIPIDERVIKVHNIAEFEETLKLAKDKLVVVEYA 453
              P  +    R       ++   ++    DERV+KVH + EF+E L+LA++KLVVVEYA
Sbjct: 61  TQKPIGSRFISRAALRSEQLTGNGIDIK--DERVLKVHTVHEFDEALRLAENKLVVVEYA 118

Query: 454 ASH 462
           ASH
Sbjct: 119 ASH 121


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