BLASTX nr result
ID: Ephedra28_contig00011597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00011597
(795 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004351089.1| transcription factor IIH subunit [Dictyostel... 150 5e-34
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 149 1e-33
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 149 1e-33
gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indi... 149 1e-33
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 148 2e-33
gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japo... 148 2e-33
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 147 3e-33
gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus... 146 7e-33
gb|EFA75456.1| transcription factor IIH subunit [Polysphondylium... 146 9e-33
dbj|BAB08508.1| DNA excision repair cross-complementing protein ... 145 1e-32
ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]... 145 1e-32
ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Or... 145 1e-32
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 145 1e-32
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 145 1e-32
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 145 1e-32
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso... 145 1e-32
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso... 145 1e-32
ref|XP_003078322.1| DNA repair and transcription factor XPB1 (IS... 145 1e-32
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 145 2e-32
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 145 2e-32
>ref|XP_004351089.1| transcription factor IIH subunit [Dictyostelium fasciculatum]
gi|328865979|gb|EGG14365.1| transcription factor IIH
subunit [Dictyostelium fasciculatum]
Length = 810
Score = 150 bits (379), Expect = 5e-34
Identities = 82/158 (51%), Positives = 108/158 (68%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL+K K++ I G+TS QERL +LRKF+ + T+ +SKVGDTSID+PEATV+IQI
Sbjct: 581 ALKKYAIEFKRYFIYGETSGQERLSILRKFQFDPSVRTIFISKVGDTSIDIPEATVIIQI 640
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVN 436
SS SRRQEAQRLGR+LRPK +S+ A FYSLVS+DT EM Y++KRQQFL++
Sbjct: 641 SSHYGSRRQEAQRLGRILRPKPKSD-----GNYNAFFYSLVSKDTQEMYYSTKRQQFLID 695
Query: 435 QGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMAD 322
QGY+F +++P L L F+ Q LL E + +
Sbjct: 696 QGYSFKVISELPGLDLETDLHFSSKEAQLGLLNEVLKE 733
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 149 bits (376), Expect = 1e-33
Identities = 83/158 (52%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 532 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQI 591
Query: 615 SSQGASRRQEAQRLGRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFL 442
SS SRRQEAQRLGR+LR KLQ G A FYSLVS DT EM Y++KRQQFL
Sbjct: 592 SSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFL 651
Query: 441 VNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
++QGY+F T +PP E RL + + Q LL + +
Sbjct: 652 IDQGYSFKVITSLPPSDEGSRLNYHHLEDQLSLLGKVL 689
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 149 bits (375), Expect = 1e-33
Identities = 83/160 (51%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K TV LSKVGD SID+PEA V+IQI
Sbjct: 534 ALTEYAMKLRKPMIYGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQI 593
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 594 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 651
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
FL++QGY+F T +PPL L + ++ Q LL + +
Sbjct: 652 FLIDQGYSFKVITSLPPLDSGPDLSYYHLDEQLALLAKVL 691
>gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indica Group]
Length = 766
Score = 149 bits (375), Expect = 1e-33
Identities = 81/166 (48%), Positives = 111/166 (66%), Gaps = 4/166 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL L+K MI G TSH ER +L +F+ + T+ LSKVGD SID+PEA V+IQI
Sbjct: 536 ALTSYAMKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQI 595
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 596 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 653
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMADKSEL 310
FL++QGY+F T +PP E L + +N Q +LL ++++ + ++
Sbjct: 654 FLIDQGYSFKVITSLPPPEELPNLKYYTLNDQLELLAQSLSARDDM 699
>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
Length = 768
Score = 148 bits (374), Expect = 2e-33
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 539 ALTEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQI 598
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 599 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 656
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP L + ++ Q QLL + ++
Sbjct: 657 FLIDQGYSFKVITSLPPSDSGSELSYHRLDEQLQLLGKVLS 697
>gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
Length = 766
Score = 148 bits (373), Expect = 2e-33
Identities = 81/166 (48%), Positives = 110/166 (66%), Gaps = 4/166 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL L+K MI G TSH ER +L +F+ + T+ LSKVGD SID+PEA V+IQI
Sbjct: 536 ALTSYAMKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQI 595
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 596 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 653
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMADKSEL 310
FL++QGY+F T +PP E L + +N Q +LL + ++ + ++
Sbjct: 654 FLIDQGYSFKVITSLPPPEELPNLKYYTLNDQLELLAQLLSARDDM 699
>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 768
Score = 147 bits (372), Expect = 3e-33
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 539 ALVEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQI 598
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 599 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 656
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP L + ++ Q QLL + ++
Sbjct: 657 FLIDQGYSFKVITSLPPSDSGSELSYHRLDDQLQLLGKVLS 697
>gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
Length = 768
Score = 146 bits (369), Expect = 7e-33
Identities = 82/159 (51%), Positives = 103/159 (64%), Gaps = 2/159 (1%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 535 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQI 594
Query: 615 SSQGASRRQEAQRLGRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFL 442
SS SRRQEAQRLGR+LR KLQ G A FYSLVS DT EM Y++KRQQFL
Sbjct: 595 SSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFL 654
Query: 441 VNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
++QGY+F T +PP E L + + Q LL + ++
Sbjct: 655 IDQGYSFKVITSLPPSDEGPSLNYYHLEDQLALLGKVLS 693
>gb|EFA75456.1| transcription factor IIH subunit [Polysphondylium pallidum PN500]
Length = 690
Score = 146 bits (368), Expect = 9e-33
Identities = 82/158 (51%), Positives = 111/158 (70%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL+ T LK+ I G TS QER+ +L KF+ + T+ +SKVGDTSID+PEATV+IQ+
Sbjct: 472 ALKMYATQLKRFYIYGATSGQERMSILSKFQHDPSVRTIFISKVGDTSIDIPEATVIIQV 531
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVN 436
SS SRRQE QRLGR+LRPK +S DGL A FYSLVS+DT EM Y++KRQQFL++
Sbjct: 532 SSHYGSRRQETQRLGRILRPKPKS---DGLY--NAFFYSLVSKDTQEMYYSTKRQQFLID 586
Query: 435 QGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMAD 322
QGY+F ++ P L + ++L F+ Q +LL+E + +
Sbjct: 587 QGYSFKVISEFPGL-DEEQLQFSTKESQLKLLQEVLRE 623
>dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
thaliana]
Length = 754
Score = 145 bits (367), Expect = 1e-32
Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+KT TV LSKVGD SID+PEA V+IQI
Sbjct: 524 ALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQI 583
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 584 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 641
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
FL++QGY+F T +PP L + Q LL + +
Sbjct: 642 FLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVL 681
>ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA
repair helicase XPB2; AltName: Full=ERCC3 homolog 2;
AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName:
Full=XPB homolog 2 gi|11037022|gb|AAG27465.1|AF308595_1
putative DNA repair protein and transcription factor
[Arabidopsis thaliana] gi|47606402|gb|AAT36214.1|
putative DNA repair and transcription factor XBP2
[Arabidopsis thaliana] gi|332007286|gb|AED94669.1| DNA
repair helicase XPB2 [Arabidopsis thaliana]
Length = 766
Score = 145 bits (367), Expect = 1e-32
Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+KT TV LSKVGD SID+PEA V+IQI
Sbjct: 536 ALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQI 595
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 596 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 653
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
FL++QGY+F T +PP L + Q LL + +
Sbjct: 654 FLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVL 693
>ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Oryza brachyantha]
Length = 918
Score = 145 bits (367), Expect = 1e-32
Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 4/166 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL L+K MI G TSH ER +L +F+ + T+ LSKVGD SID+PEA V+IQI
Sbjct: 689 ALTSYAMKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQI 748
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 749 SSHAGSRRQEAQRLGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 806
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMADKSEL 310
FL++QGY+F T +PP E L + + Q +LL +++ + ++
Sbjct: 807 FLIDQGYSFKVITSLPPPEELPNLKYYTLEEQLELLAQSLNARDDM 852
>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 145 bits (367), Expect = 1e-32
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 535 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQI 594
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 595 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQ 652
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP E L + + Q LL + ++
Sbjct: 653 FLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLS 693
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 145 bits (367), Expect = 1e-32
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 535 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQI 594
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 595 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQ 652
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP E L + + Q LL + ++
Sbjct: 653 FLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLS 693
>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
vesca]
Length = 768
Score = 145 bits (367), Expect = 1e-32
Identities = 82/158 (51%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQI
Sbjct: 535 ALTEYAMKLRKPMIYGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQI 594
Query: 615 SSQGASRRQEAQRLGRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFL 442
SS SRRQEAQRLGR+LR KL+ G A FYSLVS DT EM Y++KRQQFL
Sbjct: 595 SSHAGSRRQEAQRLGRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFL 654
Query: 441 VNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
++QGY+F T +PP L + ++ Q QLL + +
Sbjct: 655 IDQGYSFKVITSLPPPDSGADLSYHRLDEQLQLLSKVL 692
>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 145 bits (367), Expect = 1e-32
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 534 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQI 593
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 594 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQ 651
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP E L + + Q LL + ++
Sbjct: 652 FLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLS 692
>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 145 bits (367), Expect = 1e-32
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQI
Sbjct: 534 ALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQI 593
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 594 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQ 651
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
FL++QGY+F T +PP E L + + Q LL + ++
Sbjct: 652 FLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALLGKVLS 692
>ref|XP_003078322.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
gi|116056774|emb|CAL53063.1| DNA repair and transcription
factor XPB1 (ISS) [Ostreococcus tauri]
Length = 812
Score = 145 bits (367), Expect = 1e-32
Identities = 79/159 (49%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + T L++ +I GDTSH ER VL F+ + T+ LSKVGD SID+PEA V+IQI
Sbjct: 565 ALREYATALRRPLIYGDTSHAERTRVLHAFKYSNEINTIFLSKVGDNSIDIPEANVIIQI 624
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ--AIFYSLVSQDTAEMLYASKRQQFL 442
SS SRRQEAQRLGR+LRPK +G + + A FYSLVS DTAEM Y++KRQQFL
Sbjct: 625 SSHAGSRRQEAQRLGRILRPKAAQLSGKKTNADEHNAFFYSLVSTDTAEMYYSTKRQQFL 684
Query: 441 VNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAMA 325
+ QGY F TD+ ++ +L ++ Q LL + ++
Sbjct: 685 IQQGYAFKVVTDLIGPQDKQQLMYSTQEKQLDLLAKVLS 723
>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein
and transcription factor [Arabidopsis thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
[Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 145 bits (366), Expect = 2e-32
Identities = 84/160 (52%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQI
Sbjct: 536 ALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQI 595
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 596 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 653
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
FL++QGY+F T +PP L + Q LL + M
Sbjct: 654 FLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVM 693
>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 145 bits (366), Expect = 2e-32
Identities = 84/160 (52%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Frame = -1
Query: 795 ALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQI 616
AL + L+K MI G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQI
Sbjct: 536 ALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQI 595
Query: 615 SSQGASRRQEAQRLGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQ 448
SS SRRQEAQRLGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQ
Sbjct: 596 SSHAGSRRQEAQRLGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQ 653
Query: 447 FLVNQGYTFHTSTDIPPLCERDRLCFADVNVQAQLLKEAM 328
FL++QGY+F T +PP L + Q LL + M
Sbjct: 654 FLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVM 693