BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011243
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16602.1| unknown [Picea sitchensis]                              99   1e-18
ref|XP_002961333.1| hypothetical protein SELMODRAFT_437721 [Sela...    80   4e-13
ref|XP_002983230.1| hypothetical protein SELMODRAFT_445476 [Sela...    80   4e-13
ref|XP_006858564.1| hypothetical protein AMTR_s00071p00175860 [A...    74   5e-11
ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-lik...    74   5e-11
ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-lik...    74   5e-11
ref|XP_001773126.1| predicted protein [Physcomitrella patens] gi...    74   5e-11
ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-lik...    72   2e-10
gb|EOY03911.1| Hydroxyproline-rich glycoprotein family protein i...    71   3e-10
gb|EOY03910.1| Hydroxyproline-rich glycoprotein family protein i...    71   3e-10
gb|EOY03909.1| Hydroxyproline-rich glycoprotein family protein i...    71   3e-10
ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-lik...    71   3e-10
ref|XP_001769091.1| predicted protein [Physcomitrella patens] gi...    71   3e-10
ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...    69   1e-09
gb|ESW18932.1| hypothetical protein PHAVU_006G083300g [Phaseolus...    65   2e-08
gb|ESW18931.1| hypothetical protein PHAVU_006G083300g [Phaseolus...    65   2e-08
ref|XP_003553154.1| PREDICTED: protein TIC 40, chloroplastic-lik...    65   2e-08
ref|XP_003538352.1| PREDICTED: protein TIC 40, chloroplastic-lik...    65   2e-08
emb|CAB50925.1| translocon Tic40 [Pisum sativum]                       65   2e-08
sp|Q8GT66.1|TIC40_PEA RecName: Full=Protein TIC 40, chloroplasti...    65   2e-08

>gb|ABR16602.1| unknown [Picea sitchensis]
          Length = 450

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 68/173 (39%), Positives = 86/173 (49%), Gaps = 23/173 (13%)
 Frame = +2

Query: 224 SNNLLIHRHGAPFSQSRVLQTRFRQ---------QTRKQNHK---------RIIFCKSQP 349
           +++LL+H+   P  + RV   RF           Q+RK   K         R + CK++ 
Sbjct: 6   NSSLLLHQPSLP-QRHRVASGRFTGCIDTEIGFLQSRKTWRKCDGASFKARRNLHCKAKA 64

Query: 350 QDSVSVRR-----KNSEIDQSATKLVGXXXXXXXXXXXXXXXXXXXXXXXYFGSPLLWVG 514
           QD    +R     K + ++QS  +L                         Y GSPLLW+G
Sbjct: 65  QDGGVSQRTGRNPKKTGLNQSEVQLDAASNTGTQTAAVGATPFPAQPSPTYIGSPLLWIG 124

Query: 515 VGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQPGSMPIPQQPGFQF 673
           VGVGISALFSW A  VKRYAMQQVFKTMMGQ    G +QPG MP+P   GF F
Sbjct: 125 VGVGISALFSWVANSVKRYAMQQVFKTMMGQ-AAPGTSQPGGMPMPPGSGFPF 176


>ref|XP_002961333.1| hypothetical protein SELMODRAFT_437721 [Selaginella moellendorffii]
           gi|300172272|gb|EFJ38872.1| hypothetical protein
           SELMODRAFT_437721 [Selaginella moellendorffii]
          Length = 413

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 40/59 (67%), Positives = 44/59 (74%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQPGSMPIPQQP 661
           Y GSPLLWVGVGVG+S LFSWAA YVK+ AMQQ  K+MM    G G NQ G+MPIP  P
Sbjct: 84  YIGSPLLWVGVGVGLSVLFSWAANYVKKQAMQQALKSMM---SGPGQNQFGNMPIPPFP 139


>ref|XP_002983230.1| hypothetical protein SELMODRAFT_445476 [Selaginella moellendorffii]
           gi|300148915|gb|EFJ15572.1| hypothetical protein
           SELMODRAFT_445476 [Selaginella moellendorffii]
          Length = 392

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 40/59 (67%), Positives = 44/59 (74%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQPGSMPIPQQP 661
           Y GSPLLWVGVGVG+S LFSWAA YVK+ AMQQ  K+MM    G G NQ G+MPIP  P
Sbjct: 63  YIGSPLLWVGVGVGLSVLFSWAANYVKKQAMQQALKSMM---SGPGQNQFGNMPIPPFP 118


>ref|XP_006858564.1| hypothetical protein AMTR_s00071p00175860 [Amborella trichopoda]
           gi|548862673|gb|ERN20031.1| hypothetical protein
           AMTR_s00071p00175860 [Amborella trichopoda]
          Length = 416

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 37/64 (57%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGG-----VGINQPGSMPI 649
           Y GSPL W+GVGVGISALFSW A  +K+YAMQQ FKTMMGQ         G   P   P 
Sbjct: 100 YVGSPLFWIGVGVGISALFSWVATNLKKYAMQQAFKTMMGQMSSNNSQFSGAGFPPGPPF 159

Query: 650 PQQP 661
           P  P
Sbjct: 160 PFPP 163


>ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-like, partial [Cucumis
           sativus]
          Length = 304

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQPGSMP 646
           Y GSPL WVGVGVG+SALF+W A Y+K+YAMQQ FKTMM Q      N P S P
Sbjct: 98  YVGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQ--NSPMSNP 149


>ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-like [Cucumis sativus]
          Length = 419

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQPGSMP 646
           Y GSPL WVGVGVG+SALF+W A Y+K+YAMQQ FKTMM Q      N P S P
Sbjct: 98  YVGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQ--NSPMSNP 149


>ref|XP_001773126.1| predicted protein [Physcomitrella patens]
           gi|162675485|gb|EDQ61979.1| predicted protein
           [Physcomitrella patens]
          Length = 615

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVG---INQPGSMPIPQ 655
           Y GSPLLW+GVGVG+SALFS+ A  VKRYAMQQ+ K+M G  GG G      PG+ P   
Sbjct: 242 YIGSPLLWIGVGVGLSALFSFGANAVKRYAMQQMLKSMTGSAGGPGASPFGSPGANPFGA 301

Query: 656 QPGFQF 673
             G  F
Sbjct: 302 PGGNPF 307


>ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum tuberosum]
          Length = 443

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 11/68 (16%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGG-----------VGINQPG 637
           GSPL W+GVGVG+SALF+W A Y+K+YAMQQ  KTMMGQ  G            G   P 
Sbjct: 105 GSPLFWIGVGVGLSALFAWVASYLKKYAMQQALKTMMGQMNGQNSQFSNNAFSPGPGSPF 164

Query: 638 SMPIPQQP 661
             P P  P
Sbjct: 165 PFPFPPPP 172


>gb|EOY03911.1| Hydroxyproline-rich glycoprotein family protein isoform 4, partial
           [Theobroma cacao]
          Length = 412

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ---------TGGVGINQPGSM 643
           GSPL W+GVGVG+SALF+W A  +K+YAMQQ FKTMMGQ              +  P   
Sbjct: 110 GSPLFWIGVGVGLSALFTWVASSLKKYAMQQAFKTMMGQMNTQNNQFSNAAFPLGSPFPF 169

Query: 644 PIPQQPG 664
           P P  PG
Sbjct: 170 PAPPSPG 176


>gb|EOY03910.1| Hydroxyproline-rich glycoprotein family protein isoform 3
           [Theobroma cacao]
          Length = 368

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ---------TGGVGINQPGSM 643
           GSPL W+GVGVG+SALF+W A  +K+YAMQQ FKTMMGQ              +  P   
Sbjct: 110 GSPLFWIGVGVGLSALFTWVASSLKKYAMQQAFKTMMGQMNTQNNQFSNAAFPLGSPFPF 169

Query: 644 PIPQQPG 664
           P P  PG
Sbjct: 170 PAPPSPG 176


>gb|EOY03909.1| Hydroxyproline-rich glycoprotein family protein isoform 2
           [Theobroma cacao]
          Length = 433

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ---------TGGVGINQPGSM 643
           GSPL W+GVGVG+SALF+W A  +K+YAMQQ FKTMMGQ              +  P   
Sbjct: 110 GSPLFWIGVGVGLSALFTWVASSLKKYAMQQAFKTMMGQMNTQNNQFSNAAFPLGSPFPF 169

Query: 644 PIPQQPG 664
           P P  PG
Sbjct: 170 PAPPSPG 176


>ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum
           lycopersicum]
          Length = 443

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 11/68 (16%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGG-----------VGINQPG 637
           GSPL W+GVGVG SALF+W A Y+K+YAMQQ  KTMMGQ  G            G   P 
Sbjct: 105 GSPLFWIGVGVGFSALFAWVASYLKKYAMQQALKTMMGQMNGQNSQFSNTAFSPGPGSPF 164

Query: 638 SMPIPQQP 661
             P P  P
Sbjct: 165 PFPFPPPP 172


>ref|XP_001769091.1| predicted protein [Physcomitrella patens]
           gi|162679620|gb|EDQ66065.1| predicted protein
           [Physcomitrella patens]
          Length = 556

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +2

Query: 485 YFGSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVG---INQPGSMPIPQ 655
           Y GSPLLW+GVGVG+SALFS+ A  V+RYAMQQ+ K+M G  GG G      PG  P   
Sbjct: 209 YIGSPLLWIGVGVGLSALFSFGANSVQRYAMQQMLKSMSGGAGGPGASPFGAPGGNPFAG 268

Query: 656 QP 661
            P
Sbjct: 269 MP 270


>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTGGVGINQ-------PGS-MP 646
           GSPL W+GVGVG+SALFSW A  +K+YAMQQ FKT+MGQ      NQ       PGS  P
Sbjct: 98  GSPLFWIGVGVGLSALFSWVASNLKKYAMQQAFKTLMGQMDSQN-NQFNTTTFSPGSPFP 156

Query: 647 IPQQP 661
            P  P
Sbjct: 157 FPMPP 161


>gb|ESW18932.1| hypothetical protein PHAVU_006G083300g [Phaseolus vulgaris]
          Length = 367

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ 607
           GSPL W+GVGVG+SALFS  A  +K+YAMQQ FKTMMGQ
Sbjct: 103 GSPLFWIGVGVGLSALFSMVASRLKKYAMQQAFKTMMGQ 141


>gb|ESW18931.1| hypothetical protein PHAVU_006G083300g [Phaseolus vulgaris]
          Length = 430

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ 607
           GSPL W+GVGVG+SALFS  A  +K+YAMQQ FKTMMGQ
Sbjct: 103 GSPLFWIGVGVGLSALFSMVASRLKKYAMQQAFKTMMGQ 141


>ref|XP_003553154.1| PREDICTED: protein TIC 40, chloroplastic-like [Glycine max]
          Length = 432

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTG------GVGINQPGS---M 643
           GSPL W+GVGVG+SALFS  A  +K+YAMQQ FKTMMGQ        G     PGS    
Sbjct: 101 GSPLFWIGVGVGLSALFSVVASRLKKYAMQQAFKTMMGQMNSQNNQFGNAAFSPGSPFPF 160

Query: 644 PIPQQPG 664
           P+P   G
Sbjct: 161 PMPTAAG 167


>ref|XP_003538352.1| PREDICTED: protein TIC 40, chloroplastic-like [Glycine max]
          Length = 429

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQTG------GVGINQPGS---M 643
           GSPL W+GVGVG+SALFS  A  +K+YAMQQ FKTMMGQ        G     PGS    
Sbjct: 98  GSPLFWIGVGVGLSALFSVVASRLKKYAMQQAFKTMMGQMNSQNNQFGNAAFSPGSPFPF 157

Query: 644 PIPQQPG 664
           P+P   G
Sbjct: 158 PMPTAAG 164


>emb|CAB50925.1| translocon Tic40 [Pisum sativum]
          Length = 436

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ---------TGGVGINQPGSM 643
           GSPL W+G+GVG SALFS  A  VK+YAMQQ FK+MMGQ         +G      P   
Sbjct: 100 GSPLFWIGIGVGFSALFSVVASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPF 159

Query: 644 PIPQQPG 664
           P+P   G
Sbjct: 160 PMPSASG 166


>sp|Q8GT66.1|TIC40_PEA RecName: Full=Protein TIC 40, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 40; Short=PsTIC40; Flags: Precursor
           gi|26000725|gb|AAN75219.1| chloroplast protein
           translocon component Tic40 precursor [Pisum sativum]
          Length = 436

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
 Frame = +2

Query: 491 GSPLLWVGVGVGISALFSWAAKYVKRYAMQQVFKTMMGQ---------TGGVGINQPGSM 643
           GSPL W+G+GVG SALFS  A  VK+YAMQQ FK+MMGQ         +G      P   
Sbjct: 100 GSPLFWIGIGVGFSALFSVVASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPF 159

Query: 644 PIPQQPG 664
           P+P   G
Sbjct: 160 PMPSASG 166