BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011205
         (1135 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   233   8e-59
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   232   2e-58
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   231   4e-58
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   229   2e-57
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     228   3e-57
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   227   6e-57
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   224   4e-56
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   221   3e-55
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       221   6e-55
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-55
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   218   4e-54
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   217   8e-54
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   216   1e-53
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-53
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-53
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   213   9e-53
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   213   2e-52
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   211   3e-52
ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-50
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-50

>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  233 bits (595), Expect = 8e-59
 Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 8/337 (2%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXX 831
            V+  + ++EW  E ++KL G+  V  D+FV   LK L  YP  AL FF+W          
Sbjct: 62   VVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHN 121

Query: 830  XSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFT 651
               YNA++R LG++     FW V +EMK  G+ MD DT++ +  ++ K ++ ED+VRL+ 
Sbjct: 122  TVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYE 181

Query: 650  WMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLT 471
            +M + P +KP    CY +L +++     ++D    V+D +K+ G  + K VYDG HR  T
Sbjct: 182  FMMDGP-FKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFT 240

Query: 470  AAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIK 291
            +AG+FDEAEK+++ M   G+ PDNITYSQL++GLC++KR +EA +VL EM+  GC PDIK
Sbjct: 241  SAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIK 300

Query: 290  TWTILIEGHTNTGETDRALALLSEMVASGCAAD----EYTIRGLLFHLCDKNREMD-AYN 126
            TWTILI+GH    + D+ L  L +M       D    +  ++G L       R+MD AY 
Sbjct: 301  TWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFL-----SQRKMDGAYT 355

Query: 125  LLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
             L+  + +  + P   T++ +I +L +     EA  +
Sbjct: 356  FLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDL 392


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
            gi|548855973|gb|ERN13836.1| hypothetical protein
            AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  232 bits (592), Expect = 2e-58
 Identities = 127/334 (38%), Positives = 186/334 (55%), Gaps = 3/334 (0%)
 Frame = -3

Query: 1007 NHVLSFLKDKEWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXX 837
            N  +  L D EW  E K KL  +   +S+   +  L+ +   P  AL+F+ W        
Sbjct: 145  NEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFR 204

Query: 836  XXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
                 YN+++R LG+    + FW + +EMK  GF MD D++V +  R+ K  M +++V L
Sbjct: 205  HSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVEL 264

Query: 656  FTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRC 477
            + +M+E P ++P    C  +L  L+       D    V+  F+  G  + K +YDG HR 
Sbjct: 265  YEFMSEGP-YQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRS 323

Query: 476  LTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPD 297
            LT+ GRFDEA+ ++E M K GF PDNITYSQLI+GLC+A R DEA + L EM+  GC PD
Sbjct: 324  LTSMGRFDEAQNILEAMEKAGFIPDNITYSQLIFGLCKAHRFDEACKFLDEMEALGCTPD 383

Query: 296  IKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLL 117
            +KTWTILI+GH   GE   AL+   +M+  G  AD   +  L+   C++NR  DAY LL 
Sbjct: 384  LKTWTILIQGHCLAGEVKEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAYTLLS 443

Query: 116  SSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
              + + ++KP   T++ +I  L    M  EA K+
Sbjct: 444  VMMTKTHLKPWQATYKILIEGLLGRRMLEEALKL 477



 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 81/366 (22%), Positives = 150/366 (40%), Gaps = 35/366 (9%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXX 831
            V   +  K WC E + +L+ ++  ++++  +  LK L   P N+L FF+W          
Sbjct: 10   VTKLVSQKGWCEEIENQLNKLNLKLTDEGVLFVLKELEKSPRNSLGFFKWVCDKMALKPS 69

Query: 830  XSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSV---R 660
               YN MLR LG +   ++FW V  +M+  G  +D++T+  ++ R+ K +M  ++     
Sbjct: 70   SVAYNLMLRILGVKDSMKDFWWVMNKMREVGHEIDKETYPTLLGRFVKEKMVIEASSLRE 129

Query: 659  LFTWMAENPQWKPVAGICYRIL----------CALSH-------------QQCLNVDAAK 549
            LF+          +     ++L          C LS               + + VD  K
Sbjct: 130  LFSLRQRETHTNSLLNEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLK 189

Query: 548  TVIDVFKSRGGD----MEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQL 381
              +D ++  GG        + Y+   R L       E   +++EM + GF  D  +Y +L
Sbjct: 190  -ALDFYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKL 248

Query: 380  IYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGE--TDRALALLSEMVAS 207
                 +     EA E+   M +    P ++   +L+     +G    D    ++ +   +
Sbjct: 249  SRRFQKWNMLKEAVELYEFMSEGPYQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGA 308

Query: 206  GCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTE 27
            G +  +    G+   L    R  +A N +L ++E+    P   T+ ++I  L KA  + E
Sbjct: 309  GNSLTKSIYDGIHRSLTSMGRFDEAQN-ILEAMEKAGFIPDNITYSQLIFGLCKAHRFDE 367

Query: 26   ANKISD 9
            A K  D
Sbjct: 368  ACKFLD 373


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  231 bits (589), Expect = 4e-58
 Identities = 123/330 (37%), Positives = 190/330 (57%), Gaps = 3/330 (0%)
 Frame = -3

Query: 1004 HVLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXX 834
            +V+S +   EW NE +++L+G+  +  D+FV   LK L  YP  AL FF W         
Sbjct: 202  NVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYEC 261

Query: 833  XXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLF 654
                YNA+ R LG++     FW V EEMK  G  MD DT++ +  ++ K ++  D+V+L+
Sbjct: 262  NTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLY 321

Query: 653  TWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCL 474
             +M + P +KP    C  +L ++S     +++    V++ +++ G  + K VYDG HR L
Sbjct: 322  EFMMDGP-FKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSL 380

Query: 473  TAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDI 294
            T+ G FDEA K+M+ M   G+ PDNITYSQL++GLC+A+R +EA EVL EM+  GC PDI
Sbjct: 381  TSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDI 440

Query: 293  KTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLS 114
            KTWTILI+GH    E  +AL  L++M+   C  D   +  L+     + R   AY L + 
Sbjct: 441  KTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMD 500

Query: 113  SIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
             +++  ++P   T++ +I +L +     EA
Sbjct: 501  MVDKARLRPWQATYKLLIEKLLEVRKLEEA 530



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 72/365 (19%), Positives = 143/365 (39%), Gaps = 34/365 (9%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDV-SEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXX 831
            ++  L   +W  E + +L+  S + + +  +  LK L   P  A +FF W          
Sbjct: 66   LVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCDRNGFKPS 125

Query: 830  XSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFT 651
              +Y+ MLR L K+   +NFW    +MK  GF  DE+T++ ++  + K +M  D+V    
Sbjct: 126  SPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMDSDAVAFKH 185

Query: 650  WMAENPQWKPVAGICYRILCALSHQQCLN-----------VDAAKTVIDVFK-------- 528
            +     +   +  +   ++  +S  +  N           +     VI V K        
Sbjct: 186  FFDRMVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLK 245

Query: 527  -----SRGGDMEK-----VVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLI 378
                 +  G  E+     + Y+   R L       E   V+EEM   G   D  TY ++ 
Sbjct: 246  ALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKIS 305

Query: 377  YGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE--GHTNTGETDRALALLSEMVASG 204
                + K   +A ++   M      P ++  ++L+     +N  + +    ++++  A+G
Sbjct: 306  RQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATG 365

Query: 203  CAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
             +  +    G+   L       D    ++  ++    +P   T+ +++  L KA    EA
Sbjct: 366  NSLSKAVYDGIHRSLTSIG-NFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEA 424

Query: 23   NKISD 9
             ++ D
Sbjct: 425  CEVLD 429


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  229 bits (584), Expect = 2e-57
 Identities = 127/321 (39%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W ++  +KL+ +     D+FV + LK L  YP  AL FF W             YN +L
Sbjct: 214  DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L + +   +FW V EEMK  G+ MD DT++ +  ++ K ++ ED+V+LF +M + P +
Sbjct: 274  RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDGP-Y 332

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP    C  +L ++S     ++     V + ++S G  + K VYDG HR LT  GRFDEA
Sbjct: 333  KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   GF PDNITYSQ+I+GLC+A R ++A  VL EM++ GC PDIKTWTILI+G
Sbjct: 393  EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E DRAL   ++M+     AD   +  L+     + R   AY LL+  IE+ +++P
Sbjct: 453  HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVHLRP 512

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               TF+ +I +L  A    EA
Sbjct: 513  WQATFKTLIEKLLGARRLEEA 533


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  228 bits (581), Expect = 3e-57
 Identities = 121/321 (37%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGIS-DVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W +E +++L  I  D+S++  +  LK L  YP  A +FF W             YNA  
Sbjct: 212  QWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEHNSVTYNAAA 271

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L ++     FW + EEMKG G+ +D D ++ +  ++ K +M EDSV+L+ +M + P +
Sbjct: 272  RVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYEFMMDGP-F 330

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP A  C  +L ++S     +   A  V   ++S G  + K  YDG HR LT+AGRFDEA
Sbjct: 331  KPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEA 390

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   G+ PDNITYSQL++GLC+A+R +EAR VL EM+  GC PDIKTWTILI+G
Sbjct: 391  EKMMKVMRNAGYEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCTPDIKTWTILIQG 450

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H + GE D+ L    +M+   C  D   +  L+     + +   AY+LL+  +++  + P
Sbjct: 451  HCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIELVDKARVIP 510

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               T++ +I ++ +     EA
Sbjct: 511  WQATYKNLIEKMLEVRKLEEA 531



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 80/410 (19%), Positives = 151/410 (36%), Gaps = 36/410 (8%)
 Frame = -3

Query: 1130 HIIIRNSCPQIRQIRTLPQVFPPRNYCS--VXXXXXXXEVQETNHVLSFLKDKEWCNETK 957
            H   R  C Q+ +   L  + P ++  S  +            N V+  +   EW  E +
Sbjct: 23   HSSTRPPCSQVIRFSQLSSIVPNQSRGSHLINTHQKLFFSSTPNSVVELVLANEWSTELE 82

Query: 956  EKLDGIS-DVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEK 786
             +LD  +   + +  +  LK L   P  A  FF W            +Y+ MLR L  + 
Sbjct: 83   NELDDSNLGWTHERVIYVLKKLDKNPQKASVFFNWVSQKDGFRPSSLLYSLMLRILVLKD 142

Query: 785  ITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTW---MAENPQWKPVA 615
            + + FW    +MK   F +DE+TF  ++++  K +M  D V L  +   M E+     V 
Sbjct: 143  M-KRFWATLAKMKEQSFYIDEETFDSILAQLVKEKMTNDVVALRHFNDRMIEDNAMDSVV 201

Query: 614  GICYRILCALSHQQCLNVDAAKTVID--------------------------VFKSRGGD 513
                 ++  L     +     K ++D                          V +  G +
Sbjct: 202  KKVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYE 261

Query: 512  MEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREV 333
               V Y+   R L+      E   ++EEM   G+  D   Y ++     ++K  +++ ++
Sbjct: 262  HNSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKL 321

Query: 332  LHEMKKRGCNPDIKTWTILIEGHTNTGETDRALA--LLSEMVASGCAADEYTIRGLLFHL 159
               M      P  +   +L+   +     D +LA  +  +  ++G    +    G+   L
Sbjct: 322  YEFMMDGPFKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSL 381

Query: 158  CDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKISD 9
                R  D    ++  +     +P   T+ +++  L KA    EA ++ D
Sbjct: 382  TSAGR-FDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRLEEARRVLD 430


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  227 bits (579), Expect = 6e-57
 Identities = 126/321 (39%), Positives = 183/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W ++  +KL+ +     D+FV + LK L  YP  AL FF W             YN +L
Sbjct: 214  DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L + +   +FW V EEMK  G+ MD DT++ +  ++ K +M ED+V+LF +M + P +
Sbjct: 274  RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP-Y 332

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP    C  +L ++S     ++     V + ++S G  + K VYDG HR LT  GRFDEA
Sbjct: 333  KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   GF PDNITYSQ+I+GLC+A   ++A  VL EM++ GC PDIK+WTILI+G
Sbjct: 393  EKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEENGCIPDIKSWTILIQG 452

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E DRAL   ++M+     AD   +  L+     + R   AY LL+  IE+  ++P
Sbjct: 453  HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               TF+ +I +L  A    EA
Sbjct: 513  WQATFKTLIEKLLGARRLEEA 533


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  224 bits (572), Expect = 4e-56
 Identities = 125/329 (37%), Positives = 178/329 (54%), Gaps = 3/329 (0%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXXXX 831
            V   +   EW    +++L  +     D+FV   LK L   P  AL+FF W          
Sbjct: 222  VADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHWVGQSSGYEHN 281

Query: 830  XSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFT 651
               YNA+ R L +      FW V EEMKG G  +D DT++ +  ++ K +M ED+V+L+ 
Sbjct: 282  TITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYE 341

Query: 650  WMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLT 471
             M + P +KP A  C  +L ++S     ++D    V   F+S G  + K VYDG HR LT
Sbjct: 342  LMMDGP-YKPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLT 400

Query: 470  AAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIK 291
            +AG FDEAEK+ + M   G+ PDNITYSQL++GLC+AKR +EA +VL EM+  GC PDI 
Sbjct: 401  SAGSFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAKRLEEACKVLDEMEANGCVPDIM 460

Query: 290  TWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSS 111
            TWTILI+GH    E D AL   ++M+  GC AD   +  L+     + +   AY LL+  
Sbjct: 461  TWTILIQGHCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLIEM 520

Query: 110  IEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
            +    ++P   T++ +I  L       EA
Sbjct: 521  VNMTRLRPWQATYKNLIENLLGVRKLDEA 549


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
            gi|565465717|ref|XP_006290750.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559456|gb|EOA23647.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559457|gb|EOA23648.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  221 bits (564), Expect = 3e-55
 Identities = 124/322 (38%), Positives = 184/322 (57%), Gaps = 4/322 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSV-YNAM 810
            +W  E +++L  +  V  D+FV   LK L  +P  AL FF W           +V YNA 
Sbjct: 207  DWSCEVEKELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAA 266

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +      FW V +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + P 
Sbjct: 267  LRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGP- 325

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP+   C  +L +LS     ++D    V   F+S G  + K VYDG HR LT+ GRFDE
Sbjct: 326  FKPLVHDCSTLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDE 385

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE++++ M    + PDNITYSQL++GLC+AKR +EAR VL +M+ +GC+PDIKTWTILI+
Sbjct: 386  AEEIIKAMRNASYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCSPDIKTWTILIQ 445

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH    E D+A A  + M+  G   D   +  L+     +NR   AY  L+  +   N++
Sbjct: 446  GHCKNNELDKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEMVRNANVR 505

Query: 89   PSAYTFREMIMRLAKAGMYTEA 24
            P   T++ +I +L +     EA
Sbjct: 506  PWQSTYKILIDKLLEIKKGEEA 527


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  221 bits (562), Expect = 6e-55
 Identities = 119/325 (36%), Positives = 176/325 (54%), Gaps = 5/325 (1%)
 Frame = -3

Query: 974  WCNETKEKLDGISDVSEDDFVSALKTLYPGN-----ALNFFEWXXXXXXXXXXXSVYNAM 810
            W  + + KL  ++    D+ V  +     G      A  FF+W             YN +
Sbjct: 216  WGEKVEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFFKWIESSSDFEHTTVTYNGV 275

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +E+  + FW V  EM   GF +D DT+V V   + K  M+ED V+L+  M ++P 
Sbjct: 276  LRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMMDSP- 334

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP    C  +L ALS     ++     VI+ F + G  + K +YDG HR LT  G+F+E
Sbjct: 335  YKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTRLGKFEE 394

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE ++E+M + GF PDN+TYSQL++GLC+  R DEA  VL  M+K GC PDI TWTILI 
Sbjct: 395  AEGIVEKMRENGFEPDNVTYSQLVFGLCKFDRFDEAAGVLESMEKWGCKPDIMTWTILIR 454

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH   GETD+A+   + M+  G   D   +  ++  L  K+R  DA+ LL+   E+  ++
Sbjct: 455  GHFKGGETDKAMLHFARMMEKGFDPDADLLEAIVDELSKKSRAPDAFRLLVELAEKLKLR 514

Query: 89   PSAYTFREMIMRLAKAGMYTEANKI 15
            P   TF+ +I +L     + EA ++
Sbjct: 515  PWQSTFKNLIQQLLDGRRFEEAVRL 539


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  221 bits (562), Expect = 6e-55
 Identities = 121/320 (37%), Positives = 179/320 (55%), Gaps = 3/320 (0%)
 Frame = -3

Query: 974  WCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAMLR 804
            W +E ++KL  + +   D+FV   L+ L  YP  AL FF+W             YN + R
Sbjct: 214  WSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHSSITYNVIAR 273

Query: 803  ALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWK 624
             LG++     FW + EEMK  G  MD DT++ +  ++ K +M ED+V+L+  M + P +K
Sbjct: 274  VLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDGP-YK 332

Query: 623  PVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAE 444
            P    C  +L ++S     ++     V + +++ G  + K VYDG HR LT+ GRFDEA 
Sbjct: 333  PSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAG 392

Query: 443  KVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGH 264
            K+ME M   G  PDNITYSQL+YGLC+A++ +EA ++L EM+  GC PDIKTWTILI+GH
Sbjct: 393  KIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGH 452

Query: 263  TNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPS 84
                E D+AL   ++M+   C AD   +  L+     + R   AY LL+  +   ++ P 
Sbjct: 453  CAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPW 512

Query: 83   AYTFREMIMRLAKAGMYTEA 24
              T++ MI +L       EA
Sbjct: 513  QATYKLMINKLLGVRKLEEA 532



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 77/404 (19%), Positives = 158/404 (39%), Gaps = 37/404 (9%)
 Frame = -3

Query: 1109 CPQIRQIRTLPQVFPPRNYCSVXXXXXXXEV---QETNHVLSFLKDKEWCNETKEKLDGI 939
            C Q+ Q       F  ++Y S        ++    + N ++  + + +W +E + +L+  
Sbjct: 29   CYQVTQSSRFSPSFSNQSYTSAFPYILYGKLFFSSKPNSIVELVLENDWSDELESELEKS 88

Query: 938  SDV-SEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEKITENFW 768
            S V + +  +  LK L   P    NFF W           ++Y+ +LR+L   +  + FW
Sbjct: 89   SSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRPSSAMYSLILRSLVHGESMKQFW 148

Query: 767  KVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCA 588
                +MK  GF +D++T++ ++  + K +M  + V L  +     Q   +  +  +++  
Sbjct: 149  VTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVALTHFYNRMVQENAMDEVVKKVVEL 208

Query: 587  LSHQ-----------QCLNVDAAKTVIDVFKSRGG------------------DMEKVVY 495
            ++             +  N  +   V+ V +   G                  +   + Y
Sbjct: 209  VTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHSSITY 268

Query: 494  DGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKK 315
            +   R L       E   ++EEM  +G   D  TY ++     + K  ++A ++   M  
Sbjct: 269  NVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMD 328

Query: 314  RGCNPDIKTWTILIEGHTNTGETDRALA--LLSEMVASGCAADEYTIRGLLFHLCDKNRE 141
                P ++  T+L+   + +   D AL   +  +  A G +  +    G+   L    R 
Sbjct: 329  GPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGR- 387

Query: 140  MDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKISD 9
             D    ++ S+     +P   T+ +++  L KA    EA K+ D
Sbjct: 388  FDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLD 431


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  218 bits (555), Expect = 4e-54
 Identities = 122/331 (36%), Positives = 181/331 (54%), Gaps = 5/331 (1%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTL----YPGNALNFFEWXXXXXXXX 837
            V   +   EW  E + +L  +     D+FV   LK L    YP  A +FF+W        
Sbjct: 205  VSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDFQ 264

Query: 836  XXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
                 YN +LR L +E+  E FW V +EM   GF +D DT++ +   + K +M +D+V L
Sbjct: 265  HTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVEL 324

Query: 656  FTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRC 477
            +  M +  Q+KP  G C  +L +++     ++D    V++ F++ G    K++YD  HRC
Sbjct: 325  YELMMDG-QFKPSLGECNILLRSIAQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRC 383

Query: 476  LTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPD 297
            LT  GRF+EAEK+ E M   GF PDNITYSQLIYGLC+ +R +EA +V+  M++ GC PD
Sbjct: 384  LTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIPD 443

Query: 296  IKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLL 117
            IKTWT+LI+GH   GE D+AL   ++M+      D   +  LL     + R   AY LL 
Sbjct: 444  IKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDADLLDVLLNGFLSQRRVFGAYQLLT 503

Query: 116  SSIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
              + +  M+P   T++ +I +L     + EA
Sbjct: 504  ELVNKFQMRPWQATYKLVIQKLLGERKFEEA 534


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297323443|gb|EFH53864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 618

 Score =  217 bits (552), Expect = 8e-54
 Identities = 126/322 (39%), Positives = 182/322 (56%), Gaps = 4/322 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSV-YNAM 810
            +W  E + +L  ++ V  D+FV   LK L  +P  AL FF W           +V YNA 
Sbjct: 207  DWSCEVERELQEMNLVLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAA 266

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +      FW V +EMK  G  MD DT++ V  ++ K +M  ++V+L+ +M + P 
Sbjct: 267  LRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGP- 325

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP    C  +L  LS +   ++D    V   ++S G  + K VYDG HR LT+ GRFDE
Sbjct: 326  FKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 385

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE++ + M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PDIKTWTILI+
Sbjct: 386  AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQ 445

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH    E DRALA  + M+  G   D   +  L+     +NR   A   L+  ++  N+K
Sbjct: 446  GHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFLMEMVKNANVK 505

Query: 89   PSAYTFREMIMRLAKAGMYTEA 24
            P   T++ +I +L +     EA
Sbjct: 506  PWQSTYKRLIDKLLEIKKGKEA 527


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
            gi|557105401|gb|ESQ45735.1| hypothetical protein
            EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  216 bits (551), Expect = 1e-53
 Identities = 124/331 (37%), Positives = 183/331 (55%), Gaps = 4/331 (1%)
 Frame = -3

Query: 1004 HVLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXX 834
            +V + +   +W  E + KL  +     D+FV   LK L  +P  AL FF W         
Sbjct: 198  NVSALVSKVDWSYEVESKLQDMKLALSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYK 257

Query: 833  XXSV-YNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
              ++ YNA LR L +      FW V +EMK  G  +D DT++ V+ ++ K +M  ++V+L
Sbjct: 258  HSTITYNAALRVLARPNSVAEFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKL 317

Query: 656  FTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRC 477
            +  M + P +KP A  C  +L +LS     ++D    V   ++S G  + K VYDG HR 
Sbjct: 318  YELMMDGP-FKPSAQDCSLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRS 376

Query: 476  LTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPD 297
            LT+ GRFDEAE++++ M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PD
Sbjct: 377  LTSVGRFDEAEEIIKAMRDSGYEPDNITYSQLVFGLCKAKRLEEARGVLEQMEAQGCFPD 436

Query: 296  IKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLL 117
            IKTWTILI+GH    E D+A A    M+  G   D   +  L+     +NR   A   L+
Sbjct: 437  IKTWTILIQGHCKNSEVDQAFACFGNMLEKGFDIDSDLLAVLVNGFLSQNRIEGACKFLM 496

Query: 116  SSIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
              +   N+KP   T++ +I +L +     EA
Sbjct: 497  EMVRNANVKPWQNTYKALIDKLLEIKKGEEA 527


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  216 bits (550), Expect = 1e-53
 Identities = 121/331 (36%), Positives = 181/331 (54%), Gaps = 5/331 (1%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTLY----PGNALNFFEWXXXXXXXX 837
            V   +  +EW  E + +L  +     D+FV   LK L     P  A +FF+W        
Sbjct: 205  VSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQ 264

Query: 836  XXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
                 YN +LR L +E+  E FW V +EM   GF +D DT++ +   + K +M +D+V L
Sbjct: 265  HSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVEL 324

Query: 656  FTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRC 477
            +  M +  Q+KP  G C  +L +++     ++D    V++ F++ G    K++YD  HRC
Sbjct: 325  YELMMDG-QFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRC 383

Query: 476  LTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPD 297
            LT  GRF+EAEK+ E M   GF PDNITYSQLIYGLC+ +R +EA +V+  M++ GC PD
Sbjct: 384  LTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIPD 443

Query: 296  IKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLL 117
            IKTWT+LI+GH   GE D+AL   ++M+      D   +  LL     + R   AY LL 
Sbjct: 444  IKTWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLLT 503

Query: 116  SSIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
              + +  M+P   T++ +I +L     + EA
Sbjct: 504  ELVNKFQMRPWQATYKLVIQKLLGERKFEEA 534


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  216 bits (549), Expect = 2e-53
 Identities = 115/329 (34%), Positives = 183/329 (55%), Gaps = 3/329 (0%)
 Frame = -3

Query: 1001 VLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXXXX 831
            V+  +   +W N+   KL+ +     D+FV   LK L   P  AL+FF W          
Sbjct: 198  VVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHN 257

Query: 830  XSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFT 651
               YNA+ R LG++   E FW V EEMK     +D DT++ +  ++ K +M  ++V+L+ 
Sbjct: 258  TVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYE 317

Query: 650  WMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLT 471
             M + P +KP    C  +L  ++     ++     V   F++ G  + K +YDG HR LT
Sbjct: 318  LMMDGP-YKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLT 376

Query: 470  AAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIK 291
            + G+FD+AE +++ M   G+ PDN+TYSQL++GLC+A+R +EAR+VL EM+ +GC PDIK
Sbjct: 377  STGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIK 436

Query: 290  TWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSS 111
            TWTILI+GH N  E D AL   ++M+   C  D   +  L+    ++ +   AY LL+  
Sbjct: 437  TWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIEL 496

Query: 110  IEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
              + +++P   T++++I  L +     EA
Sbjct: 497  TNKAHVRPWQATYKQLIKNLLEVRKLEEA 525


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  213 bits (543), Expect = 9e-53
 Identities = 116/313 (37%), Positives = 178/313 (56%), Gaps = 2/313 (0%)
 Frame = -3

Query: 956  EKLDGISDVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEKI 783
            E +D +  ++E      L+ L   P  AL FF W             YNAM R LG+E+ 
Sbjct: 176  EGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAYNAMARVLGREES 235

Query: 782  TENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICY 603
             + FW++ +EMK  G  +D DT+V +  ++ KR M  ++V L+  M + P +KP      
Sbjct: 236  VQEFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYELMMDGP-YKPSKQDGP 294

Query: 602  RILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMT 423
             +L  ++     +++ A  V+  F++      K V+DG HR LT+ GRFDEA +VME M 
Sbjct: 295  VLLRRIALGPSPDLELAHRVVRKFEAVYEFKTKDVFDGIHRALTSNGRFDEAAEVMESMR 354

Query: 422  KEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGETD 243
             EG  PDNITYSQL++GLC+A + DEAR+VL EM+  GC PD+KTWT+LI+GH   GE D
Sbjct: 355  SEGHQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEVD 414

Query: 242  RALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREM 63
            +AL  L+EM+ +   AD   +  ++  LC++++   AY L +  +++  + P   T++ +
Sbjct: 415  KALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQLNPWQGTYKHI 474

Query: 62   IMRLAKAGMYTEA 24
            I  L +     EA
Sbjct: 475  ISELLRVKKLEEA 487


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g48250, chloroplastic; Flags: Precursor
            gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
            thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  213 bits (541), Expect = 2e-52
 Identities = 124/324 (38%), Positives = 178/324 (54%), Gaps = 6/324 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXS---VYN 816
            +W  E + +L  +  V  D+FV   LK L  +P  AL FF W                YN
Sbjct: 208  DWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYN 267

Query: 815  AMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAEN 636
            A LR L +      FW V +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + 
Sbjct: 268  AALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDG 327

Query: 635  PQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRF 456
            P +KP    C  +L  LS     ++D    V   ++S G  + K VYDG HR LT+ GRF
Sbjct: 328  P-FKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRF 386

Query: 455  DEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTIL 276
            DEAE++ + M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PDIKTWTIL
Sbjct: 387  DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446

Query: 275  IEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQN 96
            I+GH    E D+ALA  + M+  G   D   +  L+      N+   A   L+  ++  N
Sbjct: 447  IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506

Query: 95   MKPSAYTFREMIMRLAKAGMYTEA 24
            +KP   T++ +I +L K     EA
Sbjct: 507  VKPWQSTYKLLIDKLLKIKKSEEA 530


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  211 bits (538), Expect = 3e-52
 Identities = 121/337 (35%), Positives = 184/337 (54%), Gaps = 3/337 (0%)
 Frame = -3

Query: 1016 QETNHVLSFLKDKEWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXX 846
            ++   V+  +   EW ++ +++L  I  ++SE   V  L+ L   P  AL FF W     
Sbjct: 199  EDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCA 258

Query: 845  XXXXXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDS 666
                    YN M   LG+      FW V EEMK  G  +D DT++ +  ++ K +M ED+
Sbjct: 259  GYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDA 318

Query: 665  VRLFTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGY 486
            V+L+  M + P +KP       +L ++S  +  ++D    V+  F+S G  + K VYDG 
Sbjct: 319  VKLYELMMDGP-YKPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGI 377

Query: 485  HRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGC 306
            HR LT  GRFDEAE  +  M   GF PDNITYSQ+++GLC+AK+ DEA ++L +M++ GC
Sbjct: 378  HRSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKKLDEACKLLDDMEENGC 437

Query: 305  NPDIKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYN 126
             PDIKTW ILI+GH    E D+AL   ++M+   C AD   +  L+  L  + +   AY 
Sbjct: 438  VPDIKTWMILIQGHCAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYK 497

Query: 125  LLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
            LL+  +   +++P   TF+ +I  L  A    EA ++
Sbjct: 498  LLIEMLNTAHVRPWQATFKNLIQNLLGARKLEEAMEL 534


>ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Setaria italica]
          Length = 562

 Score =  206 bits (525), Expect = 1e-50
 Identities = 112/307 (36%), Positives = 171/307 (55%), Gaps = 5/307 (1%)
 Frame = -3

Query: 944  GISDVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEKITENF 771
            G+  ++E      L+ L  YP  AL FF W             YNAM RALG+E+    F
Sbjct: 158  GLLPLTETAVAKVLRELRDYPTKALAFFRWAGRQQGYKHGSVAYNAMARALGREESVPEF 217

Query: 770  WKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILC 591
            W + +EMK  G  +D DT+V +   + KR M  ++V L+  M + P +KP       I+ 
Sbjct: 218  WDLIQEMKAAGVHVDIDTYVKLSRNFQKRHMIREAVELYEHMMDGP-FKPAQKDAPLIIR 276

Query: 590  ALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGF 411
             +S     ++D A  V+  ++S      K ++D  HR LT+ G FDEA +V++ M  EG 
Sbjct: 277  RISLSPSPDLDLAIRVVSKYESVWDKKTKELFDAIHRVLTSNGSFDEAAEVVQRMRAEGH 336

Query: 410  APDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGETDRALA 231
             PDN+TYSQL+YGLC+A + D+AR+V  EM+  GC PD+KTWT+L++GH   G+ DRAL 
Sbjct: 337  QPDNVTYSQLVYGLCKAGKLDDARKVFDEMEAEGCIPDLKTWTMLVQGHCAAGDVDRALQ 396

Query: 230  LLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMI--- 60
             L+EM+     AD   +  ++  LC   +   AY L +  +++ +++P   T++ +I   
Sbjct: 397  CLTEMIDKNLDADADLLDVMVKGLCSHEKVDAAYTLFVQMVDKAHLRPWQGTYKHVIDEL 456

Query: 59   MRLAKAG 39
            +RL K G
Sbjct: 457  LRLKKLG 463


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  206 bits (525), Expect = 1e-50
 Identities = 115/331 (34%), Positives = 176/331 (53%), Gaps = 3/331 (0%)
 Frame = -3

Query: 1007 NHVLSFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXX 837
            ++V+  +   EW +E   +L  +     D+FV   LK L   P  A  FF W        
Sbjct: 202  SNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYE 261

Query: 836  XXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
                 YNA+ R L + +  E FW V EEMK  G  +D DT++ +  +  + +M ED+V+L
Sbjct: 262  HDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKL 321

Query: 656  FTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRC 477
            +  M +    KP+   C  +L ++S     N+D    V   ++S G  + K +YDG HR 
Sbjct: 322  YELMMDG-SCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRS 380

Query: 476  LTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPD 297
            LT+AG FDEAE ++  M   G+ PDNITYSQ+++GLC+ +R +EA +VL +M+   C PD
Sbjct: 381  LTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPD 440

Query: 296  IKTWTILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLL 117
            IKTWTILI+GH +  E D+AL   ++M+  GC  D   +  L      + R   AY L+ 
Sbjct: 441  IKTWTILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVA 500

Query: 116  SSIEEQNMKPSAYTFREMIMRLAKAGMYTEA 24
                +  + P   T++++I +L     + EA
Sbjct: 501  EISRKCRISPWQATYKKLIEKLLGVMKFEEA 531



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 78/365 (21%), Positives = 145/365 (39%), Gaps = 34/365 (9%)
 Frame = -3

Query: 1007 NHVLSFLKDKEWCNETKEKLDG-ISDVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXX 837
            N ++  L   +W    + KL+     +  +  +  +K L   P  A  FF W        
Sbjct: 65   NSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNWVCKKVWFR 124

Query: 836  XXXSVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL 657
               SVY+ ++R L  +   + FW     MK +GF +DE+T++ +   + + +M  DSV L
Sbjct: 125  PSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVAL 184

Query: 656  ---FTWMAE----------------NPQW-KPVAGICYRILCALSHQQCLNV--DAAKTV 543
               +  M E                  +W   V G   ++   LS    + V  +  KT 
Sbjct: 185  THFYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTP 244

Query: 542  IDVF-------KSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQ 384
            +  +       K  G + + V Y+   R L  A   +E   V+EEM + G   D  TY +
Sbjct: 245  LKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIK 304

Query: 383  LIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE--GHTNTGETDRALALLSEMVA 210
            +   L R +  ++A ++   M    C P ++   +L++     +    D    +  +  +
Sbjct: 305  ITRQLQRNRMMEDAVKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYES 364

Query: 209  SGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYT 30
            +G    +    G+   L       +A N ++ ++     +P   T+ +M+  L K   + 
Sbjct: 365  TGHTLSKAIYDGIHRSLTSAGNFDEAEN-IVRTMRNAGYEPDNITYSQMVFGLCKMRRFE 423

Query: 29   EANKI 15
            EA K+
Sbjct: 424  EACKV 428