BLASTX nr result
ID: Ephedra28_contig00011175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00011175
(412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007244668.1| prepilin-type N-terminal cleavage/methylatio... 65 9e-09
gb|EGG06604.1| hypothetical protein MELLADRAFT_86440 [Melampsora... 62 8e-08
ref|XP_001634801.1| predicted protein [Nematostella vectensis] g... 61 2e-07
ref|WP_009215183.1| penicillin-binding protein [Oribacterium sp.... 57 2e-06
ref|XP_004919441.1| PREDICTED: vegetative cell wall protein gp1-... 57 3e-06
>ref|YP_007244668.1| prepilin-type N-terminal cleavage/methylation domain-containing
protein [Thioflavicoccus mobilis 8321]
gi|505094071|ref|WP_015281173.1| prepilin-type
N-terminal cleavage/methylation domain-containing
protein [Thioflavicoccus mobilis]
gi|431829925|gb|AGA91038.1| prepilin-type N-terminal
cleavage/methylation domain-containing protein
[Thioflavicoccus mobilis 8321]
Length = 340
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/96 (39%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 117 DFKKNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSG 296
D + GSE +T SGD D GS D GS DT G G+ D GSG
Sbjct: 177 DTGSEDTGSEDTGSEDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSG 236
Query: 297 DIKKSDAGS-NAGSGDTKKSSEGSVGTKKSNVGSGD 401
D D GS + GSGDT GS T + GSGD
Sbjct: 237 DTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGD 272
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 138 GSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIKKSDA 317
GSE +T S D D GS D GS DT G G+ D GSGD D
Sbjct: 174 GSEDTGSEDTGSEDTGSEDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDT 233
Query: 318 GS-NAGSGDTKKSSEGSVGTKKSNVGSGD 401
GS + GSGDT GS T + GSGD
Sbjct: 234 GSGDTGSGDTGSGDTGSGDTGSGDTGSGD 262
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 147 GYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIKKSDAGS- 323
G +T S D D GS D GS DT G G+ D GSGD D GS
Sbjct: 172 GSGSEDTGSEDTGSEDTGSEDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSG 231
Query: 324 NAGSGDTKKSSEGSVGTKKSNVGSGD 401
+ GSGDT GS T + GSGD
Sbjct: 232 DTGSGDTGSGDTGSGDTGSGDTGSGD 257
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 111 TADFKKNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAG 290
+ D + GS +T SGD D GS D GS DT G G+ D G
Sbjct: 195 SGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGDTG 254
Query: 291 SGDIKKSDAGS-NAGSGDTKKSSEGSVGTKKSNVGS 395
SGD D GS + GSGDT GS T N+ S
Sbjct: 255 SGDTGSGDTGSGDTGSGDTGSGDTGSGDTGSGNLDS 290
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 138 GSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIKKSDA 317
G +G S+ +G D GS D GS DT G G+ D GSGD D
Sbjct: 161 GGDGSGSSD--AGGSGSEDTGSEDTGSEDTGSEDTGSGDTGSGDTGSGDTGSGDTGSGDT 218
Query: 318 GS-NAGSGDTKKSSEGSVGTKKSNVGSGD 401
GS + GSGDT GS T + GSGD
Sbjct: 219 GSGDTGSGDTGSGDTGSGDTGSGDTGSGD 247
>gb|EGG06604.1| hypothetical protein MELLADRAFT_86440 [Melampsora larici-populina
98AG31]
Length = 867
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/105 (40%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +3
Query: 111 TADFKKNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAG 290
+ D K G KS SGD K + S D K GS D+ K G G+ K G
Sbjct: 399 SGDSPKRGDGYGDSPKSGDGSGDSPKGEDSSNDSPKGGDGSGDSPKGGDGSGDSPKGGDG 458
Query: 291 SGDIKKSDAG-----SNAGSGDTKKSSEGSVGTKKSNVGSGDIKK 410
SGD KSD S GSGD+ KS +GS + KS GSGD K
Sbjct: 459 SGDSPKSDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPK 503
Score = 60.1 bits (144), Expect = 3e-07
Identities = 42/91 (46%), Positives = 47/91 (51%)
Frame = +3
Query: 138 GSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIKKSDA 317
GS KS SGD KS GS D KS GS D+ KS G G+ KS GSGD K
Sbjct: 467 GSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPK--- 523
Query: 318 GSNAGSGDTKKSSEGSVGTKKSNVGSGDIKK 410
S GSGD+ KS +GS + K SGD K
Sbjct: 524 -SGDGSGDSPKSGDGSGDSPKGGGDSGDSPK 553
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +3
Query: 111 TADFKKNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAG 290
+ D K+ GS KS SGD KS GS D KS GS D+ KS G G+ KS G
Sbjct: 468 SGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDGSGDSPKSGDG 527
Query: 291 SGDIKKSDAGS------NAGSGDTKKSSEGSVGTKKSNVGSG 398
SGD KS GS SGD+ K++ G K + GSG
Sbjct: 528 SGDSPKSGDGSGDSPKGGGDSGDSPKNNNGDGPDGKGDGGSG 569
>ref|XP_001634801.1| predicted protein [Nematostella vectensis]
gi|156221888|gb|EDO42738.1| predicted protein
[Nematostella vectensis]
Length = 163
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 126 KNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIK 305
K+ G KS++ G ++KS G ++KSQ G KS +G G + KS +G G +
Sbjct: 9 KSQSGEGTVHKSQSGEGTVRKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTVH 68
Query: 306 KSDAG------SNAGSGDTKKSSEGSVGTKKSNVGSGDIKK 410
KS +G S +G G +KS G KS G G + K
Sbjct: 69 KSQSGEGTVHKSQSGEGTVRKSQSGEGTVHKSQSGEGTVHK 109
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Frame = +3
Query: 123 KKNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDI 302
+K+ G KS++ G + KS G ++KSQ G KS +G G + KS +G G +
Sbjct: 28 RKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTV 87
Query: 303 KKSDAG------SNAGSGDTKKSSEGSVGTKKSNVGSGDIKK 410
+KS +G S +G G KS G KS G G + K
Sbjct: 88 RKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHK 129
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/95 (33%), Positives = 45/95 (47%)
Frame = +3
Query: 126 KNNKGSEGYKKSETVSGDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIK 305
K+ G KS++ G ++KS G ++KSQ G KS +G G + KS +G G +
Sbjct: 69 KSQSGEGTVHKSQSGEGTVRKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGEGTVH 128
Query: 306 KSDAGSNAGSGDTKKSSEGSVGTKKSNVGSGDIKK 410
K S +G G KS G KS G G + K
Sbjct: 129 K----SQSGEGTVHKSQSGEGTVHKSQSGEGTVHK 159
Score = 55.1 bits (131), Expect = 1e-05
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 174 GDLKKSDVGSRDLNKSQKGSADTKKSVAGLGNIKKSDAGSGDIKKSDAG------SNAGS 335
G + KS G ++KSQ G +KS +G G + KS +G G + KS +G S +G
Sbjct: 5 GTVHKSQSGEGTVHKSQSGEGTVRKSQSGEGTVHKSQSGEGTVHKSQSGEGTVHKSQSGE 64
Query: 336 GDTKKSSEGSVGTKKSNVGSGDIKK 410
G KS G KS G G ++K
Sbjct: 65 GTVHKSQSGEGTVHKSQSGEGTVRK 89
>ref|WP_009215183.1| penicillin-binding protein [Oribacterium sp. oral taxon 078]
gi|291417840|gb|EFE91559.1| transglycosylase
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 939
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +3
Query: 177 DLKKSDVGSRDLNKSQKGSADTKK--SVAGLGNIKKSDAGSGDIKKSDAGSNAGSGDTKK 350
D KKS G D KS G +D+KK S G+ KKS G D KK S+ SG KK
Sbjct: 843 DSKKSSDGDSDSKKSSDGDSDSKKKSSDGDSGSKKKSADGDSDTKKKS--SDGDSGSKKK 900
Query: 351 SSEGSVGTKKSNVGSGDIKK 410
SS+G G+KK + G D KK
Sbjct: 901 SSDGDSGSKKKSSGGSDTKK 920
>ref|XP_004919441.1| PREDICTED: vegetative cell wall protein gp1-like [Xenopus
(Silurana) tropicalis]
Length = 207
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = -1
Query: 409 FLISPEPTLDFLVPTEPSLDFLVSPDPALE------PASDFLISPEPASDFLIFPKPATD 248
+++ P P +D++VP PS+D++V P P ++ P D+++ P P+ D+++ P P D
Sbjct: 70 YMVPPTPPIDYMVPPTPSIDYMVPPTPPIDYMVPPTPPIDYMVPPTPSIDYMVPPTPPID 129
Query: 247 FLV-SAEPFWLLFKSLEP 197
++V S P + S P
Sbjct: 130 YMVPSTSPIDYMVPSTPP 147
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Frame = -1
Query: 409 FLISPEPTLDFLVPTEPSLDFLVSPDPALE------PASDFLISPEPASDFLIFPKPATD 248
+++ P P +D++VP P LD++V P P ++ P D+++ P P+ D+++ P P D
Sbjct: 40 YMVPPTPPIDYMVPLTPPLDYMVPPTPPIDYMVPPTPPIDYMVPPTPSIDYMVPPTPPID 99
Query: 247 FLVSAEP 227
++V P
Sbjct: 100 YMVPPTP 106