BLASTX nr result

ID: Ephedra28_contig00011090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011090
         (1370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001760673.1| predicted protein [Physcomitrella patens] gi...   101   6e-19

>ref|XP_001760673.1| predicted protein [Physcomitrella patens] gi|162688033|gb|EDQ74412.1|
            predicted protein [Physcomitrella patens]
          Length = 728

 Score =  101 bits (252), Expect = 6e-19
 Identities = 76/248 (30%), Positives = 106/248 (42%), Gaps = 5/248 (2%)
 Frame = +3

Query: 3    GFSGLVGVSWITRWYVAKKYNVGELLRWPVVFPFPGLGAIGCVTSYKGCLPNRDXXXXXX 182
            G   ++   W+ R  VA  Y V  ++R P   P P  GA G    YKGCLP+R       
Sbjct: 485  GLFAVIAGGWLARKAVATLYKVSHMVRLPFSLPVPHQGAFGTAVYYKGCLPDRTSLLDLS 544

Query: 183  XXXXXXXXXXXXXXXXIGYQMGIEHV-FASRDS---VNFYGFFLVPXXXXXXXXXXXXXX 350
                             G  MG  +  +AS +S   V F G  LVP              
Sbjct: 545  LSSAFASLAIS------GALMGASYTSWASSNSSGVVGFDGLLLVPEHLFSYSQLFSWLI 598

Query: 351  XXXXXATFLDE-SRGLEYVVSPVELCGLIGLCFSCFNLVPLKRFDGGRILSAVLGREKAS 527
                 AT   E    L  V++P+ L G++GL  +   L+P+  FDGGRI++ + GR+   
Sbjct: 599  HNLSVATISGEFGEDLNLVLNPLALAGVLGLHSTALGLLPVGIFDGGRIVTGIFGRDAQH 658

Query: 528  GLSVVLQCLVTGGIIVKSPXXXXXXXXXXXXXQRYDDLFQREEVSEPSVLGKFAGLTMVI 707
             ++ V   LV   + VK P                DD FQ +E ++PS+L K  GL MV+
Sbjct: 659  IVTTVTFILVAVALAVKEPWLAFAWIVSTTPV-LIDDWFQIDEATQPSLLRKVVGLGMVL 717

Query: 708  AALATFVP 731
             A+  FVP
Sbjct: 718  GAVGAFVP 725


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