BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00011003
         (833 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...    62   3e-07
emb|CBI29694.3| unnamed protein product [Vitis vinifera]               62   3e-07
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]    61   4e-07
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...    59   2e-06
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa...    59   2e-06

>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 22/281 (7%)
 Frame = +3

Query: 57  GMGRITDTSMSSNISIAQRKPSLSLKGVXXXXXXXXXXXNHPLTSPARGSPGGSMFKN-- 230
           G   + + S  S    A +K  L LKG            N  +TSP +   G +  K   
Sbjct: 42  GAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQN--VTSPVKNILGANAPKQNQ 99

Query: 231 QXXXXXXXXXXXLVNKDIQQSPQSLSLQAEHQNQTPYVHRDIRK---------------- 362
           +           L+NKD +QS QS   Q E Q+Q   + ++ R                 
Sbjct: 100 RREGSGRIIRSILLNKDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 158

Query: 363 SFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGA 542
             D+   ND+H+   ++EK D+  +N+ RPDR +WT  RR++G                 
Sbjct: 159 QDDKVVGNDVHS--FVSEKQDKRTRNKDRPDRGVWTPLRRSDG----------------- 199

Query: 543 AHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRI 722
           +HA      SDE+    ++  TS  F               + GEM+S+ +  R G+ + 
Sbjct: 200 SHA------SDESLSSSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVKA 241

Query: 723 QGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAK 833
            GS R   ++ DNG H+   RR      K+ DGS   SE K
Sbjct: 242 LGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 282


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 22/281 (7%)
 Frame = +3

Query: 57  GMGRITDTSMSSNISIAQRKPSLSLKGVXXXXXXXXXXXNHPLTSPARGSPGGSMFKN-- 230
           G   + + S  S    A +K  L LKG            N  +TSP +   G +  K   
Sbjct: 253 GAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQN--VTSPVKNILGANAPKQNQ 310

Query: 231 QXXXXXXXXXXXLVNKDIQQSPQSLSLQAEHQNQTPYVHRDIRK---------------- 362
           +           L+NKD +QS QS   Q E Q+Q   + ++ R                 
Sbjct: 311 RREGSGRIIRSILLNKDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGA 369

Query: 363 SFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGA 542
             D+   ND+H+   ++EK D+  +N+ RPDR +WT  RR++G                 
Sbjct: 370 QDDKVVGNDVHS--FVSEKQDKRTRNKDRPDRGVWTPLRRSDG----------------- 410

Query: 543 AHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRI 722
           +HA      SDE+    ++  TS  F               + GEM+S+ +  R G+ + 
Sbjct: 411 SHA------SDESLSSSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVKA 452

Query: 723 QGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAK 833
            GS R   ++ DNG H+   RR      K+ DGS   SE K
Sbjct: 453 LGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 493


>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
          Length = 304

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 22/265 (8%)
 Frame = +3

Query: 105 AQRKPSLSLKGVXXXXXXXXXXXNHPLTSPARGSPGGSMFKN--QXXXXXXXXXXXLVNK 278
           A +K  L LKG            N  +TSP +   G +  K   +           L+NK
Sbjct: 14  AGKKKVLLLKGKEREISHHLLQQN--VTSPVKNILGANAPKQNQRREGSGRIIRSILLNK 71

Query: 279 DIQQSPQSLSLQAEHQNQTPYVHRDIRK----------------SFDEAATNDLHAVPII 410
           D +QS QS   Q E Q+Q   + ++ R                   D+   ND+H+   +
Sbjct: 72  DARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHS--FV 128

Query: 411 AEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASVI 590
           +EK D+  +N+ RPDR +WT  RR++G                 +HA      SDE+   
Sbjct: 129 SEKQDKRTRNKDRPDRGVWTPLRRSDG-----------------SHA------SDESLSS 165

Query: 591 DSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSAR--ITSGDNGIH 764
            ++  TS  F               + GEM+S+ +  R G+ +  GS R   ++ DNG H
Sbjct: 166 SASQPTSSDFPE------------GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSH 213

Query: 765 RQILRR--PVGQKEVDGSVNGSEAK 833
           +   RR      K+ DGS   SE K
Sbjct: 214 KHSGRRGPTHSVKDADGSSIVSEGK 238


>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
 Frame = +3

Query: 96  ISIAQRKPSLSLKGVXXXXXXXXXXXNHP--LTSPARGSPGGSMFKNQXXXXXXXXXXXL 269
           I+ A +K  L LKG             H   +TSP +   G +  K             L
Sbjct: 266 ITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRREGRMIRGIL 325

Query: 270 VNKDIQQSPQSLSLQAEHQNQTPYVHRDIRK----------------SFDEAATNDLHAV 401
           +NKD +Q+ QS  +Q+E Q +T  + +D R                 S D+   NDLH  
Sbjct: 326 LNKDARQN-QSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG- 383

Query: 402 PIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEA 581
              +EKP+R  +N+ RPDR +WT RR    + ++E   S  S +Q A      +  +   
Sbjct: 384 ---SEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSS--SASQSALIPLDPLEGTYGD 438

Query: 582 SVIDSTGVTSPGFTSSGRINRNFLD 656
           + +D + V S    + G    + LD
Sbjct: 439 TKVDLSNVRSVQVKTVGSGRNSSLD 463


>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
           cacao]
          Length = 440

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
 Frame = +3

Query: 96  ISIAQRKPSLSLKGVXXXXXXXXXXXNHP--LTSPARGSPGGSMFKNQXXXXXXXXXXXL 269
           I+ A +K  L LKG             H   +TSP +   G +  K             L
Sbjct: 273 ITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRREGRMIRGIL 332

Query: 270 VNKDIQQSPQSLSLQAEHQNQTPYVHRDIRK----------------SFDEAATNDLHAV 401
           +NKD +Q+ QS  +Q+E Q +T  + +D R                 S D+   NDLH  
Sbjct: 333 LNKDARQN-QSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG- 390

Query: 402 PIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIIS 527
              +EKP+R  +N+ RPDR +WT RR    + ++E   S  S
Sbjct: 391 ---SEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSAS 429