BLASTX nr result

ID: Ephedra28_contig00010998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010998
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856306.1| hypothetical protein AMTR_s00047p00132160 [A...    60   3e-07

>ref|XP_006856306.1| hypothetical protein AMTR_s00047p00132160 [Amborella trichopoda]
           gi|548860166|gb|ERN17773.1| hypothetical protein
           AMTR_s00047p00132160 [Amborella trichopoda]
          Length = 1140

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 16/162 (9%)
 Frame = -3

Query: 451 NVRRLDGRSASISVAPQSTVSHLKTMLLSNGFLNSSLHRCHLYLRGSMLSDTCKIRTLEL 272
           NVR LDG + ++S++  STV  LKT+L        + H  HL+ RG+ L+   +I   ++
Sbjct: 9   NVRSLDGHTVNVSISHSSTVEDLKTLLKECFSPAKNSHDFHLFCRGTKLNPRSQITDHDI 68

Query: 271 QGDEFMVIVPFA-RNNCYQ------IHDGLIGCQSVEDKIVTEKDSKNTKYRTGLSTEKL 113
           + D F+V+VPF  +  C        IH   +         V    S      +  S+  +
Sbjct: 69  ESDNFLVLVPFVKKKRCVDEVSPRIIHGDYVKVPKSHRNQVHNASSSGPNISSNSSSNAI 128

Query: 112 SGNLIEAAAKNSVSPQD---------VTDAMWQDIFSDFSEL 14
             +L+  +    +   D           +A W DI  D S L
Sbjct: 129 DLDLLGVSPSQQIPHVDKSIKATFTSFAEAAWSDIMQDLSSL 170


Top