BLASTX nr result

ID: Ephedra28_contig00010872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010872
         (1176 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006659577.1| PREDICTED: uncharacterized protein LOC102710...    58   6e-06
gb|ADE75834.1| unknown [Picea sitchensis]                              58   6e-06
gb|ABK24216.1| unknown [Picea sitchensis] gi|224285532|gb|ACN404...    58   8e-06

>ref|XP_006659577.1| PREDICTED: uncharacterized protein LOC102710806 [Oryza brachyantha]
          Length = 171

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 5/51 (9%)
 Frame = +2

Query: 584 LGC-CKISWRHVFCKLRAELRRKIS----PRPTQKFRYDALSYAQNFDEED 721
           LGC C+ +WRHVF K+RAE+RR +     P   Q FRYD++SYAQNFD  D
Sbjct: 116 LGCHCRGTWRHVFYKVRAEVRRLLGRDGLPLSAQDFRYDSVSYAQNFDNGD 166


>gb|ADE75834.1| unknown [Picea sitchensis]
          Length = 137

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +2

Query: 584 LGCCKISWRHVFCKLRAELRRKI-SPRPTQKFRYDALSYAQNFDE 715
           +GC KI WRH+F KLRA+LR  I + RP Q F+YDA SYA NFD+
Sbjct: 61  MGCGKIGWRHLFWKLRAKLRNMIATTRPPQGFKYDAGSYALNFDD 105


>gb|ABK24216.1| unknown [Picea sitchensis] gi|224285532|gb|ACN40486.1| unknown
           [Picea sitchensis]
          Length = 122

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = +2

Query: 581 LLGCCK-ISWRHVFCKLRAELRRKISPRPT--QKFRYDALSYAQNFDE 715
           +LGCC+ ISW++V  K++A+L R I PRP     FRYDALSYA NFD+
Sbjct: 64  MLGCCRRISWKNVCWKIKADLTRMIKPRPASHMTFRYDALSYALNFDD 111


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