BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010731
         (794 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ05998.1| hypothetical protein PRUPE_ppa000144mg [Prunus pe...   225   2e-56
ref|NP_001266210.1| dicer-like protein 4 [Solanum lycopersicum] ...   220   4e-55
gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]             219   9e-55
ref|XP_006848760.1| hypothetical protein AMTR_s00026p00051870 [A...   217   3e-54
ref|XP_006343692.1| PREDICTED: dicer-like protein 4-like isoform...   215   1e-53
ref|XP_006343691.1| PREDICTED: dicer-like protein 4-like isoform...   215   1e-53
ref|XP_006343690.1| PREDICTED: dicer-like protein 4-like isoform...   215   1e-53
ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-...   213   8e-53
gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japo...   212   1e-52
gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indi...   212   1e-52
dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica G...   212   1e-52
dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]     212   1e-52
sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homo...   212   1e-52
ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group] g...   212   1e-52
emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group] gi...   212   1e-52
ref|XP_002308384.2| hypothetical protein POPTR_0006s20310g [Popu...   211   2e-52
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...   211   3e-52
gb|EOY29630.1| Dicer-like protein isoform 2, partial [Theobroma ...   209   1e-51
gb|EOY29629.1| Dicer-like protein, putative isoform 1 [Theobroma...   209   1e-51
ref|XP_004976180.1| PREDICTED: endoribonuclease Dicer homolog 4-...   206   6e-51

>gb|EMJ05998.1| hypothetical protein PRUPE_ppa000144mg [Prunus persica]
          Length = 1639

 Score =  225 bits (573), Expect = 2e-56
 Identities = 121/254 (47%), Positives = 162/254 (63%), Gaps = 1/254 (0%)
 Frame = -2

Query: 760  LRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMP-SKCCSYEEHYKNRYN 584
            +R ++G   I D++NS++  P+  ++FY I D++ E NA S    S   SY +H   +++
Sbjct: 857  IRLASGYKSISDVKNSLVYAPY-KSTFYFITDVVQERNAYSPYKDSGTLSYVDHLIKKFH 915

Query: 583  IVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPELCILKLKXXX 404
            I LKYPEQ +L AK L CL NLLH    N  QE        E F++LPPELC LK+    
Sbjct: 916  IHLKYPEQQLLHAKPLFCLHNLLH----NRKQEDSGPQQLDEYFIDLPPELCELKVLAFS 971

Query: 403  XXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEKCSEGFSL 224
                        +MHRLE+LL+AIELK  LS +F EG +VT +R+LEA+TTEKC E FSL
Sbjct: 972  KDIGSSISLLPSIMHRLENLLVAIELKHVLSVSFPEGAEVTAERVLEALTTEKCQERFSL 1031

Query: 223  ERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGIQVYIRDE 44
            ERLE+LGDA+LKFA   H F+ +   DEG LTR R+ ++ NSNL+K      +QVYIRD+
Sbjct: 1032 ERLEILGDAFLKFAVGRHFFLLHDSLDEGGLTRKRSNVVNNSNLFKLATRSNLQVYIRDQ 1091

Query: 43   YFDPKHFYAVGRPC 2
             F+P  F+A+GRPC
Sbjct: 1092 SFEPSQFFALGRPC 1105


>ref|NP_001266210.1| dicer-like protein 4 [Solanum lycopersicum]
            gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum
            lycopersicum]
          Length = 1620

 Score =  220 bits (561), Expect = 4e-55
 Identities = 123/265 (46%), Positives = 168/265 (63%), Gaps = 1/265 (0%)
 Frame = -2

Query: 793  CESNSYEN-SNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCC 617
            C SN+       L+ +NGS  + D+ NS++  P   ++F+ I D++ + NA S M     
Sbjct: 838  CTSNNMSKFEEQLQLANGSKSVHDVVNSLVYVPC-KDAFFFISDVVKDKNAYS-MYKDSK 895

Query: 616  SYEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPP 437
            ++ EHY + +++ L YP+Q ++KAK L CL+NLL  +  +   E R   D +E FVELPP
Sbjct: 896  NHVEHYYDTFSVHLLYPDQPLIKAKQLFCLENLLRKKGYS---ELR---DKEEHFVELPP 949

Query: 436  ELCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAI 257
            E+C LK+                +MHRLESLL+AIELK  LSA+F EG ++ +D +LEA+
Sbjct: 950  EICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGRELAIDHVLEAL 1009

Query: 256  TTEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGI 77
            TTE C E FSLERLEVLGDA+LKFA   H+F+ +   DEG LTR R+  + NSNLY   I
Sbjct: 1010 TTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVAI 1069

Query: 76   AKGIQVYIRDEYFDPKHFYAVGRPC 2
             K +Q YIRD+ F+P HFY VGRPC
Sbjct: 1070 KKNLQAYIRDQSFEPDHFYVVGRPC 1094


>gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
          Length = 1622

 Score =  219 bits (558), Expect = 9e-55
 Identities = 123/253 (48%), Positives = 163/253 (64%)
 Frame = -2

Query: 760  LRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEHYKNRYNI 581
            L+ +NGS  + D+ NS++  P    +F+ I D++ E NA S +     ++ EHY + + I
Sbjct: 853  LQLANGSKSVHDVANSLVYVPC-KETFFFISDVVKESNAYS-IYKDSKNHVEHYYDTFGI 910

Query: 580  VLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPELCILKLKXXXX 401
             L YPEQ ++KAK L CL NLL  +  +   E R   D +E FVELP E+C LK+     
Sbjct: 911  RLSYPEQPLIKAKQLFCLDNLLRKKGYS---ELR---DKEEHFVELPAEICQLKIIGFSK 964

Query: 400  XXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEKCSEGFSLE 221
                       +MHRLESLL+AIELK  LSA+F EG +VT+D +LEA+TTEKC+E FSLE
Sbjct: 965  DIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVTIDHVLEALTTEKCNEPFSLE 1024

Query: 220  RLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGIQVYIRDEY 41
            RLEVLGDA+LKFA   HVF+  +  DEG LTR R+ ++ NS LY   +   +Q +IRD+ 
Sbjct: 1025 RLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQAFIRDQS 1084

Query: 40   FDPKHFYAVGRPC 2
            FDP HFYAVGRPC
Sbjct: 1085 FDPYHFYAVGRPC 1097


>ref|XP_006848760.1| hypothetical protein AMTR_s00026p00051870 [Amborella trichopoda]
            gi|548852193|gb|ERN10341.1| hypothetical protein
            AMTR_s00026p00051870 [Amborella trichopoda]
          Length = 1371

 Score =  217 bits (553), Expect = 3e-54
 Identities = 122/254 (48%), Positives = 165/254 (64%), Gaps = 1/254 (0%)
 Frame = -2

Query: 760  LRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPS-KCCSYEEHYKNRYN 584
            L   +G  +++ I  S++ TP     F+ + +IL  V+A S M S K  +Y E+YK ++ 
Sbjct: 578  LELIDGPINVNYITKSLVFTPR-TKLFFFVTEILHGVSATSRMESYKDITYAEYYKGKFG 636

Query: 583  IVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPELCILKLKXXX 404
            I L+Y EQ +LKAK L   +NLLH   N + + +  RG  KE FVELPPELC LK+    
Sbjct: 637  ISLQY-EQPLLKAKQLFICRNLLH---NRLLENSEARG-LKEHFVELPPELCSLKIINFS 691

Query: 403  XXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEKCSEGFSL 224
                        LMHRLE LL+A+ELK++LSA+F EG Q+T  R+LEAIT+EKC E FSL
Sbjct: 692  KDIGSSLSLLPSLMHRLEGLLVAVELKEKLSASFSEGSQITAHRVLEAITSEKCMERFSL 751

Query: 223  ERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGIQVYIRDE 44
            ERLE+LGDAYLK+A S H+F+     DEG LT+ R++++ N++LY   I   +Q YIRDE
Sbjct: 752  ERLEILGDAYLKYAVSRHLFLSCRGFDEGQLTKKRSSIVNNAHLYNLAIRSNLQAYIRDE 811

Query: 43   YFDPKHFYAVGRPC 2
             F+P +F AVGRPC
Sbjct: 812  CFEPSNFLAVGRPC 825


>ref|XP_006343692.1| PREDICTED: dicer-like protein 4-like isoform X3 [Solanum tuberosum]
          Length = 1342

 Score =  215 bits (548), Expect = 1e-53
 Identities = 122/266 (45%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
 Frame = -2

Query: 793  CESNSYENS--NWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKC 620
            C SN+  +     L+ +NGS  + D+ NS++  P   ++F+ I D++ + NA S +    
Sbjct: 839  CTSNNKMSKFEEQLQLANGSKSVHDVANSLVYVPC-KDAFFFISDVVKDKNAYS-IYKDS 896

Query: 619  CSYEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELP 440
             ++ EHY +  ++ L YP+Q ++KAK L CL+NLL  +  +   E R   D +E FVELP
Sbjct: 897  KNHVEHYYDISSVHLLYPDQPLIKAKQLFCLENLLRKKGYS---ELR---DKEEHFVELP 950

Query: 439  PELCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEA 260
            PE+C LK+                +MHRLESLL+AIELK  LSA+F EG +V +D +LEA
Sbjct: 951  PEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVAIDHVLEA 1010

Query: 259  ITTEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKG 80
            +TTE C E FSLERLEVLGDA+LKFA   H+F+ +   DEG LTR R+  + NSNLY   
Sbjct: 1011 LTTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVA 1070

Query: 79   IAKGIQVYIRDEYFDPKHFYAVGRPC 2
            I   +Q YIRD+ F+P HFY VGRPC
Sbjct: 1071 IRNNLQAYIRDQSFEPNHFYVVGRPC 1096


>ref|XP_006343691.1| PREDICTED: dicer-like protein 4-like isoform X2 [Solanum tuberosum]
          Length = 1621

 Score =  215 bits (548), Expect = 1e-53
 Identities = 122/266 (45%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
 Frame = -2

Query: 793  CESNSYENS--NWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKC 620
            C SN+  +     L+ +NGS  + D+ NS++  P   ++F+ I D++ + NA S +    
Sbjct: 838  CTSNNKMSKFEEQLQLANGSKSVHDVANSLVYVPC-KDAFFFISDVVKDKNAYS-IYKDS 895

Query: 619  CSYEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELP 440
             ++ EHY +  ++ L YP+Q ++KAK L CL+NLL  +  +   E R   D +E FVELP
Sbjct: 896  KNHVEHYYDISSVHLLYPDQPLIKAKQLFCLENLLRKKGYS---ELR---DKEEHFVELP 949

Query: 439  PELCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEA 260
            PE+C LK+                +MHRLESLL+AIELK  LSA+F EG +V +D +LEA
Sbjct: 950  PEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVAIDHVLEA 1009

Query: 259  ITTEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKG 80
            +TTE C E FSLERLEVLGDA+LKFA   H+F+ +   DEG LTR R+  + NSNLY   
Sbjct: 1010 LTTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVA 1069

Query: 79   IAKGIQVYIRDEYFDPKHFYAVGRPC 2
            I   +Q YIRD+ F+P HFY VGRPC
Sbjct: 1070 IRNNLQAYIRDQSFEPNHFYVVGRPC 1095


>ref|XP_006343690.1| PREDICTED: dicer-like protein 4-like isoform X1 [Solanum tuberosum]
          Length = 1622

 Score =  215 bits (548), Expect = 1e-53
 Identities = 122/266 (45%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
 Frame = -2

Query: 793  CESNSYENS--NWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKC 620
            C SN+  +     L+ +NGS  + D+ NS++  P   ++F+ I D++ + NA S +    
Sbjct: 839  CTSNNKMSKFEEQLQLANGSKSVHDVANSLVYVPC-KDAFFFISDVVKDKNAYS-IYKDS 896

Query: 619  CSYEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELP 440
             ++ EHY +  ++ L YP+Q ++KAK L CL+NLL  +  +   E R   D +E FVELP
Sbjct: 897  KNHVEHYYDISSVHLLYPDQPLIKAKQLFCLENLLRKKGYS---ELR---DKEEHFVELP 950

Query: 439  PELCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEA 260
            PE+C LK+                +MHRLESLL+AIELK  LSA+F EG +V +D +LEA
Sbjct: 951  PEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVAIDHVLEA 1010

Query: 259  ITTEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKG 80
            +TTE C E FSLERLEVLGDA+LKFA   H+F+ +   DEG LTR R+  + NSNLY   
Sbjct: 1011 LTTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVA 1070

Query: 79   IAKGIQVYIRDEYFDPKHFYAVGRPC 2
            I   +Q YIRD+ F+P HFY VGRPC
Sbjct: 1071 IRNNLQAYIRDQSFEPNHFYVVGRPC 1096


>ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Oryza brachyantha]
          Length = 1633

 Score =  213 bits (541), Expect = 8e-53
 Identities = 121/262 (46%), Positives = 162/262 (61%), Gaps = 1/262 (0%)
 Frame = -2

Query: 784  NSYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEE 605
            +SY  +  LR  +G     D+  SV+ +PH NN F+ +  IL E+NA+SE   K  +Y E
Sbjct: 832  DSYSPNKSLRLLDGICSKTDVVGSVVFSPH-NNIFFFVDAILDEINARSEY--KDATYAE 888

Query: 604  HYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELC 428
            H+K R+ I L  PEQ +LKAK L  L+NLLH   N + +   + G +  E FVELPPELC
Sbjct: 889  HFKERFGIELSQPEQPLLKAKQLFNLRNLLH---NRLQETTESEGRELTEHFVELPPELC 945

Query: 427  ILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTE 248
             LK+                LM+RLE+LL+AIELK  +S++F E  +++   +LEAITTE
Sbjct: 946  SLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMSSSFPEASKISASGILEAITTE 1005

Query: 247  KCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKG 68
            KC E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NSNLY   I + 
Sbjct: 1006 KCLERISLERFEVLGDAFLKYVVGRHNFITYEGLDEGQLTRRRSDVVNNSNLYDLSIRRN 1065

Query: 67   IQVYIRDEYFDPKHFYAVGRPC 2
            +QVYIRD+ F+P  F+A GRPC
Sbjct: 1066 LQVYIRDQQFEPIQFFAPGRPC 1087


>gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
          Length = 1632

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 830  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 886

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 887  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 943

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 944  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 1003

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 1004 CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 1063

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 1064 QVYIRDQQFEPTQFFAPGRPC 1084


>gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
          Length = 1576

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 781  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 837

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 838  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 894

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 895  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 954

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 955  CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 1014

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 1015 QVYIRDQQFEPTQFFAPGRPC 1035


>dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1058

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 263  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 319

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 320  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 376

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 377  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 436

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 437  CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 496

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 497  QVYIRDQQFEPTQFFAPGRPC 517


>dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
          Length = 1631

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 836  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 892

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 893  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 949

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 950  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 1009

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 1010 CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 1069

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 1070 QVYIRDQQFEPTQFFAPGRPC 1090


>sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
            Full=Dicer-like protein 4; Short=OsDCL4; AltName:
            Full=Protein SHOOT ORGANIZATION 1
            gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza
            sativa Japonica Group]
          Length = 1657

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 862  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 918

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 919  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 975

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 976  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 1035

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 1036 CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 1095

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 1096 QVYIRDQQFEPTQFFAPGRPC 1116


>ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
            gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza
            sativa Japonica Group]
          Length = 1090

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 295  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 351

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 352  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 408

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 409  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 468

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 469  CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 528

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 529  QVYIRDQQFEPTQFFAPGRPC 549


>emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
            gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2
            [Oryza sativa Indica Group]
          Length = 1604

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/261 (45%), Positives = 162/261 (62%), Gaps = 1/261 (0%)
 Frame = -2

Query: 781  SYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEEH 602
            SY ++  LR  +G F   D+  SV+ +PH NN F+ +  IL E+NA SE      +Y EH
Sbjct: 809  SYSSNESLRLLDGIFSKTDVVGSVVFSPH-NNIFFFVDGILDEINAWSEHSG--ATYAEH 865

Query: 601  YKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRG-DYKEQFVELPPELCI 425
            +K R+ I L +PEQ +LKAK +  L+NLLH   N + +   + G +  E FVELPPELC 
Sbjct: 866  FKERFRIELSHPEQPLLKAKQIFNLRNLLH---NRLPETTESEGRELLEHFVELPPELCS 922

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM+RLE+LL+AIELK  + ++F E  Q++   +LEA+TTEK
Sbjct: 923  LKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEK 982

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DEG LTR R+ ++ NS+LY+  I K +
Sbjct: 983  CLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKL 1042

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  F+A GRPC
Sbjct: 1043 QVYIRDQQFEPTQFFAPGRPC 1063


>ref|XP_002308384.2| hypothetical protein POPTR_0006s20310g [Populus trichocarpa]
            gi|550336710|gb|EEE91907.2| hypothetical protein
            POPTR_0006s20310g [Populus trichocarpa]
          Length = 1638

 Score =  211 bits (537), Expect = 2e-52
 Identities = 119/258 (46%), Positives = 159/258 (61%), Gaps = 1/258 (0%)
 Frame = -2

Query: 772  NSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMP-SKCCSYEEHYK 596
            +++ L+ +NG   I D+ NS++ TPH    FY I +I+PE N  S    S   S+++H  
Sbjct: 863  SNDCLQLANGCSSIRDVENSLVYTPHQKK-FYFITNIVPEKNGDSPCKGSNTRSHKDHLT 921

Query: 595  NRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPELCILKL 416
              + I L+YPEQ +L+AK L CL+NLL     N  +E     +  E FV+L PELC LK+
Sbjct: 922  TTFGIHLRYPEQPLLRAKQLFCLRNLLC----NRKKEDSELQELDEHFVDLAPELCELKI 977

Query: 415  KXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEKCSE 236
                            +MHRLE+LL+AIELK  LSA+F EG +VT  R+LEA+TTEKC E
Sbjct: 978  IGFSKDIGSSISLLPSVMHRLENLLVAIELKCILSASFSEGDKVTAHRVLEALTTEKCQE 1037

Query: 235  GFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGIQVY 56
              SLERLE LGDA+LKFA   H F+ +   DEG LTR R+  + NSNL+K      +QV+
Sbjct: 1038 RLSLERLETLGDAFLKFAVGRHFFLLHDTLDEGELTRKRSNAVNNSNLFKLASRNNLQVF 1097

Query: 55   IRDEYFDPKHFYAVGRPC 2
            IRD+ FDP  F+A+G PC
Sbjct: 1098 IRDQPFDPYQFFALGHPC 1115


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score =  211 bits (536), Expect = 3e-52
 Identities = 122/266 (45%), Positives = 160/266 (60%), Gaps = 3/266 (1%)
 Frame = -2

Query: 790  ESNSYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCS- 614
            E     + + L+ +NG   I DI NS++  PH  + FY I +I    NA+S  P KC S 
Sbjct: 849  EKECLPSDDCLQLANGCRSIRDIENSLVYIPHKKH-FYFITNIDRGKNARS--PHKCSST 905

Query: 613  --YEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELP 440
              Y E    R+ I LKYPEQ +L+AK L  L NLLH    N  +E     +  E  ++ P
Sbjct: 906  SSYMEFLIQRFGIQLKYPEQPLLQAKPLFSLHNLLH----NRRKEDSVTQELDEYLIDFP 961

Query: 439  PELCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEA 260
            PELC LK+                +MHRLE+LL+AIELK  LSA+F EG +VT  R+LEA
Sbjct: 962  PELCELKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKSLLSASFSEGAEVTAYRILEA 1021

Query: 259  ITTEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKG 80
            +TTE+C E  SLERLE+LGDA+LKFA   H+F+ +   DEG LTR R+  + NSNL K  
Sbjct: 1022 LTTERCQERLSLERLEILGDAFLKFAVGRHLFLLHDTLDEGELTRKRSNAVNNSNLLKLA 1081

Query: 79   IAKGIQVYIRDEYFDPKHFYAVGRPC 2
              + +QVYIRD+ FDP+ F+A+G PC
Sbjct: 1082 SRRNLQVYIRDQPFDPRQFFALGHPC 1107


>gb|EOY29630.1| Dicer-like protein isoform 2, partial [Theobroma cacao]
          Length = 1614

 Score =  209 bits (531), Expect = 1e-51
 Identities = 120/264 (45%), Positives = 161/264 (60%), Gaps = 1/264 (0%)
 Frame = -2

Query: 790  ESNSYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEM-PSKCCS 614
            E+ ++ +   L  +NG   + D++NS +  PH   +FY I +I+ E N  S    S   S
Sbjct: 859  ENGNFPSGVCLELANGCRDVRDVKNSFVYAPH-KVAFYFITNIVGEKNGYSPYRDSGTLS 917

Query: 613  YEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPE 434
            + EH K   +I LK+PEQ +L+AK L  L+NLLH    N   E     +  E F++LPPE
Sbjct: 918  HVEHLKMS-DIHLKHPEQPLLRAKPLFKLRNLLH----NRKPEDSESNELDEYFIDLPPE 972

Query: 433  LCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAIT 254
            LC LK+                +MHRLE+LL+AIELK   SA+F EG +VT +++LEA+T
Sbjct: 973  LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHVFSASFPEGAEVTANKVLEALT 1032

Query: 253  TEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIA 74
            TEKC E FSLERLE LGDA+LKFA   H+F+ +   DEG LTR R+  + NSNL+K    
Sbjct: 1033 TEKCQERFSLERLESLGDAFLKFAVGRHLFLLHDALDEGGLTRRRSNAVNNSNLFKLATR 1092

Query: 73   KGIQVYIRDEYFDPKHFYAVGRPC 2
              +QVYIRD+ FDP  FYA+G PC
Sbjct: 1093 SNLQVYIRDQPFDPCQFYALGHPC 1116


>gb|EOY29629.1| Dicer-like protein, putative isoform 1 [Theobroma cacao]
          Length = 1690

 Score =  209 bits (531), Expect = 1e-51
 Identities = 120/264 (45%), Positives = 161/264 (60%), Gaps = 1/264 (0%)
 Frame = -2

Query: 790  ESNSYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEM-PSKCCS 614
            E+ ++ +   L  +NG   + D++NS +  PH   +FY I +I+ E N  S    S   S
Sbjct: 895  ENGNFPSGVCLELANGCRDVRDVKNSFVYAPH-KVAFYFITNIVGEKNGYSPYRDSGTLS 953

Query: 613  YEEHYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPE 434
            + EH K   +I LK+PEQ +L+AK L  L+NLLH    N   E     +  E F++LPPE
Sbjct: 954  HVEHLKMS-DIHLKHPEQPLLRAKPLFKLRNLLH----NRKPEDSESNELDEYFIDLPPE 1008

Query: 433  LCILKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAIT 254
            LC LK+                +MHRLE+LL+AIELK   SA+F EG +VT +++LEA+T
Sbjct: 1009 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHVFSASFPEGAEVTANKVLEALT 1068

Query: 253  TEKCSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIA 74
            TEKC E FSLERLE LGDA+LKFA   H+F+ +   DEG LTR R+  + NSNL+K    
Sbjct: 1069 TEKCQERFSLERLESLGDAFLKFAVGRHLFLLHDALDEGGLTRRRSNAVNNSNLFKLATR 1128

Query: 73   KGIQVYIRDEYFDPKHFYAVGRPC 2
              +QVYIRD+ FDP  FYA+G PC
Sbjct: 1129 SNLQVYIRDQPFDPCQFYALGHPC 1152


>ref|XP_004976180.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X2 [Setaria
            italica]
          Length = 1327

 Score =  206 bits (525), Expect = 6e-51
 Identities = 115/261 (44%), Positives = 160/261 (61%)
 Frame = -2

Query: 784  NSYENSNWLRFSNGSFHIDDIRNSVIITPHHNNSFYCILDILPEVNAKSEMPSKCCSYEE 605
            +SY  +  L+  +G++   D+  S++ TPH NN F+ + DIL E+N KSE      +Y  
Sbjct: 527  DSYLPNESLKLLDGTYSKADVIGSLVFTPH-NNLFFFVDDILDEINGKSEFNG--ATYAA 583

Query: 604  HYKNRYNIVLKYPEQAMLKAKGLLCLQNLLHPRANNMSQEARNRGDYKEQFVELPPELCI 425
            H++ R++I L +PEQ  L+AK L  L+NLLH R    S E+  R +  E FVELPPELC 
Sbjct: 584  HFEERFDIELSHPEQPFLRAKQLFNLRNLLHNRQQE-STESEGR-ELMEHFVELPPELCS 641

Query: 424  LKLKXXXXXXXXXXXXXXXLMHRLESLLLAIELKQRLSAAFHEGCQVTVDRLLEAITTEK 245
            LK+                LM  LE+LL+A+ELK  + + F E  Q++   +LEA+TTE+
Sbjct: 642  LKITGFSKDMGSSLSLLPSLMCHLENLLVALELKDVMLSYFPEASQISASGILEALTTER 701

Query: 244  CSEGFSLERLEVLGDAYLKFAASMHVFVKNSEDDEGCLTRLRTALIRNSNLYKKGIAKGI 65
            C E  SLER EVLGDA+LK+    H F+     DE  LTR R+ ++ NSNLY+  I + +
Sbjct: 702  CLERISLERFEVLGDAFLKYVVGRHNFISYEGLDEDQLTRRRSDIVNNSNLYELSIRRNL 761

Query: 64   QVYIRDEYFDPKHFYAVGRPC 2
            QVYIRD+ F+P  FYA+GRPC
Sbjct: 762  QVYIRDQQFEPTQFYALGRPC 782