BLASTX nr result

ID: Ephedra28_contig00010681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010681
         (537 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304322.1| PREDICTED: probable polyadenylate-binding pr...    57   2e-06

>ref|XP_004304322.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Fragaria vesca subsp. vesca]
          Length = 638

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
 Frame = -3

Query: 532 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT-VYY-APNHF-SPHPQNQGMLFPQMA 362
           R+A LQ QYA  M   + P+      +V+PG Y  +YY AP+    P P   G+++  M 
Sbjct: 379 RQAQLQLQYAQRMAGFAGPS-----AAVIPGGYPHIYYQAPSGVVPPGPPRPGIMYQPMG 433

Query: 361 VXXXXXXXXXXXXXXPAIQR--MPMAMGNPR-IRTPRSRMTSPAAPQQGQLMTVLPTPQG 191
           +              PA Q   +P+    PR  R  R R+     PQ G     +P  Q 
Sbjct: 434 LRPGWRPNGFGPTSGPAFQPPPVPVMSNTPRQYRQNRGRLNGHMLPQGGPF---IPHLQQ 490

Query: 190 VSQLSYKDAAPHQQRPWQSGKYVPNGRVRE 101
            +QL++   + +QQRP Q  KYVPNGR R+
Sbjct: 491 STQLTHSKDSNNQQRPGQP-KYVPNGRQRD 519


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