BLASTX nr result
ID: Ephedra28_contig00010666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00010666
(1337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76324.1| unknown [Picea sitchensis] gi|294463669|gb|ADE773... 528 e-147
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li... 517 e-144
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus... 516 e-144
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li... 516 e-144
gb|AFK40126.1| unknown [Medicago truncatula] 515 e-143
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li... 514 e-143
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 513 e-143
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li... 513 e-143
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 512 e-142
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao... 512 e-142
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A... 511 e-142
ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li... 511 e-142
ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-li... 511 e-142
ref|XP_002446951.1| hypothetical protein SORBIDRAFT_06g025740 [S... 511 e-142
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe... 510 e-142
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li... 510 e-142
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 509 e-141
ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-li... 509 e-141
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part... 509 e-141
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa... 508 e-141
>gb|ADE76324.1| unknown [Picea sitchensis] gi|294463669|gb|ADE77361.1| unknown [Picea
sitchensis]
Length = 335
Score = 528 bits (1359), Expect = e-147
Identities = 265/332 (79%), Positives = 297/332 (89%)
Frame = +3
Query: 63 ASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGK 242
+S SS +A+ DLPWVEK+RP+KV DI+GN +A+SRLQ+IARDGNMPNLIL+GPPGTGK
Sbjct: 4 SSAPPSSSAANYDLPWVEKYRPSKVSDIVGNQDALSRLQVIARDGNMPNLILAGPPGTGK 63
Query: 243 TTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDE 422
TTS+LALAHELLGS++K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDE
Sbjct: 64 TTSILALAHELLGSNYKEGVIELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDE 123
Query: 423 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRL 602
ADSMT GAQQALRRTMEI+SN+TRFALACNTS+KIIEPIQSRCAIVRFS+LSD+EILGRL
Sbjct: 124 ADSMTGGAQQALRRTMEIFSNSTRFALACNTSAKIIEPIQSRCAIVRFSKLSDQEILGRL 183
Query: 603 LHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLH 782
+ VV+AE+V YVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQENVFKVCDQPHPLH
Sbjct: 184 MRVVEAEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQENVFKVCDQPHPLH 243
Query: 783 VKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 962
VK M+++VLEGNFDEA +RLK LY+LGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF
Sbjct: 244 VKSMVQNVLEGNFDEACSRLKNLYDLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 303
Query: 963 AHMRIXXXXXXXXXXXXXXXXXXIVRENAKAA 1058
AHMRI IVR+ +KAA
Sbjct: 304 AHMRISDGVGSLLQLSGLLAKLSIVRDTSKAA 335
>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
Length = 332
Score = 517 bits (1332), Expect = e-144
Identities = 260/327 (79%), Positives = 291/327 (88%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS SA D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPN+ILSGP GTGKTTS+L
Sbjct: 6 SSNSAIYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSIL 65
Query: 258 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 437
ALAHELLG +++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMT
Sbjct: 66 ALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMT 125
Query: 438 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 617
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VVQ
Sbjct: 126 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQ 185
Query: 618 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 797
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M+
Sbjct: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMV 245
Query: 798 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 977
++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 246 RNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
Query: 978 XXXXXXXXXXXXXXXXXXIVRENAKAA 1058
+VRE AKAA
Sbjct: 306 CDGVGSYLQMCGLLAKLSLVRETAKAA 332
>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
Length = 330
Score = 516 bits (1330), Expect = e-144
Identities = 260/329 (79%), Positives = 288/329 (87%)
Frame = +3
Query: 69 VGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTT 248
+ SS S D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTT
Sbjct: 1 MSSSSASNTYDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 60
Query: 249 SVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEAD 428
S+LALAHELLG + K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEAD
Sbjct: 61 SILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEAD 120
Query: 429 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLH 608
SMTTGAQQALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCAIVRFSRL D+EILGRL+
Sbjct: 121 SMTTGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMI 180
Query: 609 VVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVK 788
VVQAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK
Sbjct: 181 VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVK 240
Query: 789 GMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAH 968
M+++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAH
Sbjct: 241 NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 300
Query: 969 MRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
MRI +VRENAKA
Sbjct: 301 MRICDGVGSYLQLCGLLAKLSLVRENAKA 329
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication
factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 516 bits (1330), Expect = e-144
Identities = 258/331 (77%), Positives = 291/331 (87%)
Frame = +3
Query: 63 ASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGK 242
AS GSS ++ D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGK
Sbjct: 2 ASSSGSS--SNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 59
Query: 243 TTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDE 422
TTS+LALAHELLG ++K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDE
Sbjct: 60 TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 119
Query: 423 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRL 602
ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRL+D+EILGRL
Sbjct: 120 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 179
Query: 603 LHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLH 782
+ V+QAE+VPYVPEGLEAI+FTADGDMRQALNNLQATHSGF+FVNQ+NVFKVCDQPHPLH
Sbjct: 180 MVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLH 239
Query: 783 VKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 962
VK ++++VLEG FD+A L+ LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGF
Sbjct: 240 VKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 299
Query: 963 AHMRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
AHMRI +VRE AKA
Sbjct: 300 AHMRICDGVGSYLQLCGLLAKLSMVRETAKA 330
>gb|AFK40126.1| unknown [Medicago truncatula]
Length = 333
Score = 515 bits (1326), Expect = e-143
Identities = 258/332 (77%), Positives = 291/332 (87%)
Frame = +3
Query: 63 ASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGK 242
AS SS +A D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGK
Sbjct: 2 ASSSSSSNTASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 61
Query: 243 TTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDE 422
TTS+LALAHELLG +++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDE
Sbjct: 62 TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 121
Query: 423 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRL 602
ADSMT+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL
Sbjct: 122 ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRL 181
Query: 603 LHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLH 782
+ VVQAE+VPYVPEGLEAI+FTADGDMRQ LNNLQAT SGFQFVNQ NVFKVCDQPHPLH
Sbjct: 182 MVVVQAEKVPYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLH 241
Query: 783 VKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 962
VK M+++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IK+YDM EYLKLEF++ETGF
Sbjct: 242 VKNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGF 301
Query: 963 AHMRIXXXXXXXXXXXXXXXXXXIVRENAKAA 1058
AHMRI +VR+ A AA
Sbjct: 302 AHMRICDGVGSYLQMCGLLAKFALVRDTANAA 333
>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 331
Score = 514 bits (1323), Expect = e-143
Identities = 257/327 (78%), Positives = 287/327 (87%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS S+ ++PWVEKFRPTKV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 5 SSTSSGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSIL 64
Query: 258 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 437
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDEADSMT
Sbjct: 65 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMT 124
Query: 438 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 617
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRF+RLSD+EILGRL+ VV
Sbjct: 125 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVA 184
Query: 618 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 797
AE+V YVPEGLEAI+FTADGDMRQ LNNLQATHSGF FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMV 244
Query: 798 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 977
++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAHMRI
Sbjct: 245 RNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRI 304
Query: 978 XXXXXXXXXXXXXXXXXXIVRENAKAA 1058
+VRE AKAA
Sbjct: 305 CDGVGSYLQMCGLLAKLSLVRETAKAA 331
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 513 bits (1322), Expect = e-143
Identities = 254/332 (76%), Positives = 293/332 (88%)
Frame = +3
Query: 63 ASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGK 242
A+ SS + + D+PWVEK+RP+K+ DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGK
Sbjct: 2 ATSSSSSATQNYDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 61
Query: 243 TTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDE 422
TTS+LALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDE
Sbjct: 62 TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 121
Query: 423 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRL 602
ADSMT+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRLSD+EILGRL
Sbjct: 122 ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL 181
Query: 603 LHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLH 782
+ VVQAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLH
Sbjct: 182 IIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLH 241
Query: 783 VKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 962
VK M++ V+EG +D+A + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGF
Sbjct: 242 VKNMVRHVMEGKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 301
Query: 963 AHMRIXXXXXXXXXXXXXXXXXXIVRENAKAA 1058
AHMRI +VR+ A+AA
Sbjct: 302 AHMRICDGVGSYLQLCGLLAKLALVRDTARAA 333
>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 331
Score = 513 bits (1320), Expect = e-143
Identities = 261/330 (79%), Positives = 289/330 (87%), Gaps = 1/330 (0%)
Frame = +3
Query: 69 VGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTT 248
+ SS S D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTT
Sbjct: 1 MSSSSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 60
Query: 249 SVLALAHELLGS-HFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEA 425
S+LALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKI+ILDEA
Sbjct: 61 SILALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEA 120
Query: 426 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLL 605
DSMTTGAQQALRRTMEIYSNTTRFALACNTS+KIIEPIQSRCAIVRFSRLSD+EILGRL+
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLM 180
Query: 606 HVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHV 785
VVQAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHV
Sbjct: 181 VVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHV 240
Query: 786 KGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFA 965
K M+++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFA
Sbjct: 241 KNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
Query: 966 HMRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
HMRI +VRE AKA
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSLVRETAKA 330
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 512 bits (1319), Expect = e-142
Identities = 255/330 (77%), Positives = 289/330 (87%)
Frame = +3
Query: 69 VGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTT 248
+ SS S++ D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTT
Sbjct: 1 MASSSNSSNYDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTT 60
Query: 249 SVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEAD 428
S+LALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPG+HKI+ILDEAD
Sbjct: 61 SILALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEAD 120
Query: 429 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLH 608
SMT+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+
Sbjct: 121 SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMV 180
Query: 609 VVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVK 788
VV AE+VPYVPEGLEAI+FTADGDMRQALNNLQATHSGF FVNQENVFKVCDQPHPLHVK
Sbjct: 181 VVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVK 240
Query: 789 GMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAH 968
M++ VLEG FD+A + LK LY++GYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAH
Sbjct: 241 NMVRQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAH 300
Query: 969 MRIXXXXXXXXXXXXXXXXXXIVRENAKAA 1058
MRI +VR+ A+AA
Sbjct: 301 MRICDGVGSYLQLCGLLAKLALVRDTARAA 330
>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 512 bits (1318), Expect = e-142
Identities = 258/327 (78%), Positives = 286/327 (87%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS S D+PWVEK+RP KV DI+GN +AVSRLQ+IA DGNMPNLILSGPPGTGKTTS+L
Sbjct: 6 SSSSGGYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSIL 65
Query: 258 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 437
ALAHELLG+++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMT
Sbjct: 66 ALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMT 125
Query: 438 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 617
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRLSD+EILGRL+ VV
Sbjct: 126 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVD 185
Query: 618 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 797
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMV 245
Query: 798 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 977
+ VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 246 RYVLEGRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
Query: 978 XXXXXXXXXXXXXXXXXXIVRENAKAA 1058
+VRE AKAA
Sbjct: 306 CDGVGSYLQLCGLLAKFSLVRETAKAA 332
>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
gi|548861950|gb|ERN19315.1| hypothetical protein
AMTR_s00069p00063160 [Amborella trichopoda]
Length = 331
Score = 511 bits (1317), Expect = e-142
Identities = 255/326 (78%), Positives = 288/326 (88%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS S +LPWVEK+RP KV +++GN +AVSRLQ+IARDGNMPNLILSGPPGTGKT+S+L
Sbjct: 5 SSSSGGYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTSSIL 64
Query: 258 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 437
ALAHELLG++FK AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKII+LDEADSMT
Sbjct: 65 ALAHELLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEADSMT 124
Query: 438 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 617
TGAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 125 TGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVD 184
Query: 618 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 797
AE+VPYVPEGLEA++FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVPYVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMV 244
Query: 798 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 977
++V++G F+EA + LK LY+LGYS TDIITTLFR+IKNYDMPEYLKLEF++ETGFAHMRI
Sbjct: 245 RNVIDGKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRI 304
Query: 978 XXXXXXXXXXXXXXXXXXIVRENAKA 1055
VRE AKA
Sbjct: 305 CDGVGSLLQLCGLLAKLSRVRETAKA 330
>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum lycopersicum]
Length = 331
Score = 511 bits (1317), Expect = e-142
Identities = 255/327 (77%), Positives = 287/327 (87%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS S+ ++PWVEKFRPTKV DI+GN +AV+RLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 5 SSTSSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSIL 64
Query: 258 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 437
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDEADSMT
Sbjct: 65 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMT 124
Query: 438 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 617
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRF+RLSD+EILGRL+ VV
Sbjct: 125 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVA 184
Query: 618 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 797
AE+V YVPEGLEAI+FTADGDMRQ LNNLQATHSGF FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMV 244
Query: 798 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 977
++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAHMRI
Sbjct: 245 RNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRI 304
Query: 978 XXXXXXXXXXXXXXXXXXIVRENAKAA 1058
+VRE AKA+
Sbjct: 305 CDGVGSYLQMCGLLAKLSLVRETAKAS 331
>ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-like [Brachypodium
distachyon]
Length = 333
Score = 511 bits (1315), Expect = e-142
Identities = 256/333 (76%), Positives = 289/333 (86%)
Frame = +3
Query: 57 MEASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGT 236
M AS ++ + D+PWVEK+RP++V D++GNS+AVSRL++IARDGNMPNLILSGPPGT
Sbjct: 1 MAASSSAAAPTDTYDIPWVEKYRPSRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGT 60
Query: 237 GKTTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIIL 416
GKTTS+LALAHE+LG ++ V+ELNASDDRG+DVVRNKIK FAQ+KVTLPPGRHKI+IL
Sbjct: 61 GKTTSILALAHEMLGPSYREGVLELNASDDRGLDVVRNKIKMFAQKKVTLPPGRHKIVIL 120
Query: 417 DEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILG 596
DEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILG
Sbjct: 121 DEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILG 180
Query: 597 RLLHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHP 776
RL+ VV AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHP
Sbjct: 181 RLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHP 240
Query: 777 LHVKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRET 956
LHVK M+K+VL+G FDEA + LK LY+LGYS TDIITTLFRV+KNYDM EYLKLE ++ET
Sbjct: 241 LHVKNMVKNVLDGKFDEACSGLKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLELLKET 300
Query: 957 GFAHMRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
GFAHMRI IVRE AKA
Sbjct: 301 GFAHMRICDGVGSFLQLSGLLAKFAIVRETAKA 333
>ref|XP_002446951.1| hypothetical protein SORBIDRAFT_06g025740 [Sorghum bicolor]
gi|241938134|gb|EES11279.1| hypothetical protein
SORBIDRAFT_06g025740 [Sorghum bicolor]
Length = 333
Score = 511 bits (1315), Expect = e-142
Identities = 257/332 (77%), Positives = 288/332 (86%), Gaps = 3/332 (0%)
Frame = +3
Query: 69 VGGSSWSAHGD---LPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTG 239
+ SS +AH D +PWVEK+RP +V D++GNS+AV+RL++IARDGNMPNLILSGPPGTG
Sbjct: 1 MAASSAAAHADTYDIPWVEKYRPNRVADVVGNSDAVARLEVIARDGNMPNLILSGPPGTG 60
Query: 240 KTTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILD 419
KTTS+LALAHELLG ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHKI+ILD
Sbjct: 61 KTTSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILD 120
Query: 420 EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGR 599
EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGR
Sbjct: 121 EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGR 180
Query: 600 LLHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPL 779
L+ VV AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPL
Sbjct: 181 LMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPL 240
Query: 780 HVKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETG 959
HVK M+K+VL+G FDEA LK LY+LGYS TDIITTLFRV+KNYDMPEYLKLE ++ETG
Sbjct: 241 HVKNMVKNVLDGKFDEACAALKQLYDLGYSPTDIITTLFRVVKNYDMPEYLKLEMLKETG 300
Query: 960 FAHMRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
FAHMRI +VRE AKA
Sbjct: 301 FAHMRICDGVGSFLQLSGLLAKFALVREIAKA 332
>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 510 bits (1314), Expect = e-142
Identities = 256/331 (77%), Positives = 290/331 (87%)
Frame = +3
Query: 63 ASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGK 242
AS SS SA+ D+PWVEK+RP+ V DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGK
Sbjct: 2 ASSSSSSSSAY-DIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK 60
Query: 243 TTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDE 422
TTS+LALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDE
Sbjct: 61 TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
Query: 423 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRL 602
ADSMT+GAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCA+VRFSRLSD+EILGRL
Sbjct: 121 ADSMTSGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRL 180
Query: 603 LHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLH 782
+ VVQAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLH
Sbjct: 181 MIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLH 240
Query: 783 VKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF 962
VK M+ +VLEG FD+A + LK LY+LGYS TDIITT FR+IKNYDM EYLKLEF++ETGF
Sbjct: 241 VKNMVCNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGF 300
Query: 963 AHMRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
AHMRI ++RE AKA
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSLIRETAKA 331
>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 332
Score = 510 bits (1314), Expect = e-142
Identities = 261/327 (79%), Positives = 287/327 (87%), Gaps = 1/327 (0%)
Frame = +3
Query: 78 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 257
SS S D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 5 SSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 64
Query: 258 ALAHELLGS-HFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSM 434
ALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKI+ILDEADSM
Sbjct: 65 ALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSM 124
Query: 435 TTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVV 614
TTGAQQALRRTMEIYSNTTRFALACNTS+KIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 125 TTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVV 184
Query: 615 QAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGM 794
QAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M
Sbjct: 185 QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNM 244
Query: 795 IKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMR 974
+ +V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMR
Sbjct: 245 VCNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 304
Query: 975 IXXXXXXXXXXXXXXXXXXIVRENAKA 1055
I +VRE AKA
Sbjct: 305 ICDGVGSYLQLCGLLAKLSLVRETAKA 331
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 509 bits (1311), Expect = e-141
Identities = 255/329 (77%), Positives = 288/329 (87%)
Frame = +3
Query: 69 VGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTT 248
+ SS ++ D+PWVEK+RPTKV DI+GN + VSRLQ+IARDGNMPNLILSGPPGTGKTT
Sbjct: 1 MASSSSMSNYDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTT 60
Query: 249 SVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEAD 428
SVLALAHELLG++++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLP G HKI+ILDEAD
Sbjct: 61 SVLALAHELLGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEAD 120
Query: 429 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLH 608
SMTTGAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCAIVRFSRLSD+EILGRL+
Sbjct: 121 SMTTGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMV 180
Query: 609 VVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVK 788
VV+AE+VP+VPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK
Sbjct: 181 VVEAEKVPFVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVK 240
Query: 789 GMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAH 968
M+++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAH
Sbjct: 241 NMVRNVLEGKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 300
Query: 969 MRIXXXXXXXXXXXXXXXXXXIVRENAKA 1055
MRI +VRE AKA
Sbjct: 301 MRICDGVGSYLQLCGLLAKLAVVRETAKA 329
>ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-like [Oryza brachyantha]
Length = 335
Score = 509 bits (1310), Expect = e-141
Identities = 253/319 (79%), Positives = 283/319 (88%)
Frame = +3
Query: 99 DLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVLALAHELL 278
D+PWVEK+RPT+V D++GNS+AVSRL++IARDGNMPNLILSGPPGTGKTTS+LALAHELL
Sbjct: 17 DIPWVEKYRPTRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGKTTSILALAHELL 76
Query: 279 GSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMTTGAQQAL 458
G ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHK++ILDEADSMT+GAQQAL
Sbjct: 77 GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKVVILDEADSMTSGAQQAL 136
Query: 459 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQAEEVPYV 638
RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV AE+VPYV
Sbjct: 137 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVAAEKVPYV 196
Query: 639 PEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMIKDVLEGN 818
PEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+K+VL+G
Sbjct: 197 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 256
Query: 819 FDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRIXXXXXXX 998
FDEA + LK LY+LGYS TDIITTLFRVIKNYDM EYLKLE ++ETGFAHMRI
Sbjct: 257 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 316
Query: 999 XXXXXXXXXXXIVRENAKA 1055
+VRE AKA
Sbjct: 317 LQLSGLLAKFALVRETAKA 335
>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
gi|482571159|gb|EOA35347.1| hypothetical protein
CARUB_v10020535mg, partial [Capsella rubella]
Length = 360
Score = 509 bits (1310), Expect = e-141
Identities = 253/334 (75%), Positives = 291/334 (87%)
Frame = +3
Query: 57 MEASVGGSSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGT 236
++ SS S+ G+ PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGT
Sbjct: 27 LKKMASSSSASSGGEEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGT 86
Query: 237 GKTTSVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIIL 416
GKTTS+LALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++IL
Sbjct: 87 GKTTSILALAHELLGKNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVIL 146
Query: 417 DEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILG 596
DEADSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSD++ILG
Sbjct: 147 DEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDEQILG 206
Query: 597 RLLHVVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHP 776
RL+ VVQAE VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+ VNQENVFKVCDQPHP
Sbjct: 207 RLMVVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHP 266
Query: 777 LHVKGMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRET 956
LHVK ++++VLE FD+A + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ET
Sbjct: 267 LHVKNIVRNVLESKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKET 326
Query: 957 GFAHMRIXXXXXXXXXXXXXXXXXXIVRENAKAA 1058
GFAHMRI IVRE AKAA
Sbjct: 327 GFAHMRICDGVGSYLQLCGLLAKLAIVRETAKAA 360
>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
sativa Indica Group] gi|218195393|gb|EEC77820.1|
hypothetical protein OsI_17026 [Oryza sativa Indica
Group]
Length = 335
Score = 508 bits (1309), Expect = e-141
Identities = 253/320 (79%), Positives = 284/320 (88%)
Frame = +3
Query: 99 DLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVLALAHELL 278
D+PWVEK+RPT+V D++GNS+AV+RLQ+IARDGNMPNLILSGPPGTGKTTS+L+LAHELL
Sbjct: 16 DIPWVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGKTTSILSLAHELL 75
Query: 279 GSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMTTGAQQAL 458
G ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHKI+ILDEADSMT+GAQQAL
Sbjct: 76 GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQAL 135
Query: 459 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQAEEVPYV 638
RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV AE+VPYV
Sbjct: 136 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYV 195
Query: 639 PEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMIKDVLEGN 818
PEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+K+VL+G
Sbjct: 196 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 255
Query: 819 FDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRIXXXXXXX 998
FDEA + LK LY+LGYS TDIITTLFRVIKNYDM EYLKLE ++ETGFAHMRI
Sbjct: 256 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 315
Query: 999 XXXXXXXXXXXIVRENAKAA 1058
+VRE AKA+
Sbjct: 316 LQLSGLLAKFALVRETAKAS 335