BLASTX nr result

ID: Ephedra28_contig00010526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010526
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              60   6e-07

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
 Frame = +3

Query: 6   TVLR-MANTVGNAHWILLGLSVVSFTLQTWQTAKANVKECVEVLQEMVDLAKNIRAVWPV 182
           T++R +   +G AH    GL VV+  L+ ++    N  EC  VL+EM+ LAK ++ +   
Sbjct: 152 TIVRGLLQGMGTAHLATTGLLVVANILERFEDVSDNQDECFHVLKEMIFLAKVVKQI--- 208

Query: 183 LSSDTERGKECEGMLDR---AIRLIVEAALVVVQYSGKKNVRKFCLANSMKEDLQNIHSN 353
                ER +  + M D    A  LIVE ++             F   +  KE+L  +   
Sbjct: 209 ----KERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQFSNFFSTSVNKEELGEVAQQ 264

Query: 354 MQSLNTSLVVLITSTTANHVMSSIPL----RRNKRWLETSYDFQPIGIKERVNKVKEMVH 521
           +      +          ++   I +    +  K  L   Y    +G++E   +V +++ 
Sbjct: 265 LDVKYKHI----------YIQMGIEIYDVGQCKKANLSRRYPEHAVGLEESSREVIDLLE 314

Query: 522 AKGDEMARAVVIHGSGGFGKTFVAKSVIQEIE 617
               + A AV++HG GG GKT +A +V   ++
Sbjct: 315 WGSQQNAVAVILHGFGGMGKTTLADAVFSMVD 346


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