BLASTX nr result

ID: Ephedra28_contig00010516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010516
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25443.1| unknown [Picea sitchensis]                              57   2e-06

>gb|ABK25443.1| unknown [Picea sitchensis]
          Length = 464

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
 Frame = -2

Query: 400 HVVMVPSTGMGHYLPFMEVAKQLMTSIEGLSVTFITSS--LTPPQAQDTLTGVQHSGLPL 227
           HV + PS GMGH +PF E AK L+ S  G S+TFIT+   +TP Q   T   +  SGL +
Sbjct: 7   HVAIFPSVGMGHLIPFFEFAK-LLASGHGFSITFITAKFMVTPSQTAYT-KSLASSGLSI 64

Query: 226 TLILLPQPCNDDGSLMQPSHGNFPKFLFDFMERSVPAFESILKSIMKNKSVAKDDGQRTF 47
             I LP+   D     +    +    +F  +E++  + E+ L++++ + S          
Sbjct: 65  RFIELPEVELDS----EEKKAHPLVLIFKVLEKTTGSVENALRTLLSDSS---------- 110

Query: 46  DKDDVIVVTDLFCSA 2
                  +TD+FC+A
Sbjct: 111 -NPISAFITDIFCTA 124


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