BLASTX nr result

ID: Ephedra28_contig00010409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010409
         (983 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850422.1| hypothetical protein AMTR_s00165p00040130 [A...    58   5e-06

>ref|XP_006850422.1| hypothetical protein AMTR_s00165p00040130 [Amborella trichopoda]
           gi|548854067|gb|ERN12003.1| hypothetical protein
           AMTR_s00165p00040130 [Amborella trichopoda]
          Length = 419

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
 Frame = +1

Query: 664 LHQNAQQHPPQSPSSYIPPGWQAAVNPTQE-----RSVSNYDDKNYPPLIAAQGAGMGAQ 828
           L Q  QQH  +  S +     QA    TQ+     RS S        PL  +  A +  Q
Sbjct: 240 LQQLKQQHAMKQQSDFTVWARQAKAQQTQQLQGRVRSCSFGARSGGKPLGFSSPAWIPPQ 299

Query: 829 KNVSEANV---------SGRECGGTGFFLPRRSAKGNDSRRRKTKPACSTVFLPYRVIQA 981
           + ++ + +         S RE GGTG FLPRR+   N+ R+   KPACSTV LP RV+QA
Sbjct: 300 QQIAGSGMRAVFLNGTGSRRESGGTGVFLPRRAGSPNEMRK---KPACSTVLLPARVVQA 356


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