BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010314
         (753 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t...    58   4e-06
gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Am...    57   9e-06

>gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda]
          Length = 354

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = -3

Query: 403 KRKVQRIQLPTHYLEVNYRTMKAVVFDNPDFEFLPIQVKKALNNL 269
           KR+++RI+LPTHYLEVNYRT+KAVVF  PD   +P  ++    NL
Sbjct: 289 KRRIKRIELPTHYLEVNYRTLKAVVFYGPDIGHIPHDIRLKDPNL 333


>gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Amborella
           trichopoda]
          Length = 324

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -3

Query: 403 KRKVQRIQLPTHYLEVNYRTMKAVVFDNPDFEFLP 299
           KR+++RI+LPTHYLEVNYRT+KAVVF  PD   +P
Sbjct: 289 KRRIKRIELPTHYLEVNYRTLKAVVFYGPDIGHIP 323