BLASTX nr result

ID: Ephedra28_contig00010276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00010276
         (1032 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289661.1| PREDICTED: F-box protein At2g16365-like [Fra...    63   2e-07
ref|XP_003569584.1| PREDICTED: uncharacterized protein LOC100844...    60   1e-06

>ref|XP_004289661.1| PREDICTED: F-box protein At2g16365-like [Fragaria vesca subsp.
           vesca]
          Length = 447

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
 Frame = -3

Query: 421 LSLPWIQRWCRSQSHK-FIPNER-----LLKSKTKKWKYHRFSLQSLPSAAAMAIVGITV 260
           LS PWI+RW    SHK F PN+      + + ++ K ++ +F  +  PS AAMA++G  +
Sbjct: 370 LSHPWIRRW----SHKVFAPNKNSEAAVVSQPQSPKARFDQFQKKKFPSIAAMALMGKAM 425

Query: 259 QNLRPCKQQKRGSFSVWNTAGY 194
               PC+  K+GSF VWNT G+
Sbjct: 426 NGFNPCEFAKKGSFVVWNTKGF 447


>ref|XP_003569584.1| PREDICTED: uncharacterized protein LOC100844984 [Brachypodium
           distachyon]
          Length = 751

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
 Frame = -3

Query: 523 IEYKQDRGQLHSGAESFGTRAKVS-SQKKSDMASILSLP---WIQRWCRSQSHKFIPNER 356
           ++YK+DR  +    +      + S  Q+  D++SI +     WI RWC+  +  F     
Sbjct: 638 LDYKRDRTSMIKHVKEDQLMHETSMEQENQDLSSISAKSLNDWIGRWCQGGTPSFHGTSS 697

Query: 355 LLKSKTKKWKYHRFSLQSLPSAAAMAIVGITVQNLRPCKQQKRGSFSVWNTAG 197
           L K   K            PS AAMA++G  +  LRPC+ QKRG   VWNT G
Sbjct: 698 LGKQSRKSTSPPDCLEGQFPSIAAMAMMGRVMNKLRPCELQKRGPSVVWNTEG 750


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