BLASTX nr result
ID: Ephedra28_contig00010178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00010178
(536 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006855227.1| hypothetical protein AMTR_s00051p00211030 [A... 79 5e-13
gb|ABK25922.1| unknown [Picea sitchensis] 79 8e-13
gb|ABR17821.1| unknown [Picea sitchensis] 78 1e-12
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 75 1e-11
ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citr... 75 1e-11
ref|XP_006657270.1| PREDICTED: protein couch potato-like [Oryza ... 74 2e-11
ref|XP_003611682.1| RNA-binding protein with multiple splicing [... 74 2e-11
ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Popu... 73 4e-11
gb|ACF83035.1| unknown [Zea mays] gi|413934630|gb|AFW69181.1| hy... 73 5e-11
ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotei... 72 6e-11
ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [S... 72 6e-11
ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotei... 72 8e-11
ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotei... 72 8e-11
ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotei... 72 8e-11
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 71 1e-10
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 71 1e-10
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 71 1e-10
gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus... 70 2e-10
ref|XP_006573645.1| PREDICTED: U2 small nuclear ribonucleoprotei... 70 4e-10
ref|XP_006573644.1| PREDICTED: U2 small nuclear ribonucleoprotei... 70 4e-10
>ref|XP_006855227.1| hypothetical protein AMTR_s00051p00211030 [Amborella trichopoda]
gi|548858980|gb|ERN16694.1| hypothetical protein
AMTR_s00051p00211030 [Amborella trichopoda]
Length = 327
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRKE 355
FLKLK+ ++ G P+AFVDF+D S++ALN LQ ++LYSS H GM LEYAK RMGLP++E
Sbjct: 266 FLKLKMQMKHGAPVAFVDFQDSTCSTQALNLLQGSILYSSGHKGMRLEYAKTRMGLPKRE 325
Query: 354 K 352
+
Sbjct: 326 R 326
>gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRK 358
FLKLK+ I G P+AFVDF+++ SS++ALN+LQN +L SS GGM L+YAKARMG PR+
Sbjct: 283 FLKLKMQIIGELPVAFVDFQEITSSTQALNHLQNAMLLSSDRGGMRLQYAKARMGRPRR 341
>gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRKE 355
F LK+ +GG P+AFVDF+DV SS++AL LQ+TLL SS GG+HLEYAK+RM PR++
Sbjct: 224 FKMLKLQTKGGMPVAFVDFEDVTSSAEALKQLQDTLLPSSDRGGLHLEYAKSRMKYPRED 283
Query: 354 K 352
K
Sbjct: 284 K 284
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSS-VHGGMHLEYAKARMGLPRK 358
FLKLKI G P+AFVDF+D SS+ ALNNLQ T+LYSS G+ LE+AK+RMG+PRK
Sbjct: 265 FLKLKIQSTYGPPVAFVDFQDTVSSTAALNNLQGTILYSSPTSDGIRLEFAKSRMGMPRK 324
Query: 357 EK 352
K
Sbjct: 325 AK 326
>ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527947|gb|ESR39197.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 322
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSS-VHGGMHLEYAKARMGLPRK 358
FLKLKI G P+AFVDF+D SS+ ALNNLQ T+LYSS G+ LE+AK+RMG+PRK
Sbjct: 261 FLKLKIQSTYGPPVAFVDFQDTVSSTAALNNLQGTILYSSPTSDGIRLEFAKSRMGMPRK 320
Query: 357 EK 352
K
Sbjct: 321 AK 322
>ref|XP_006657270.1| PREDICTED: protein couch potato-like [Oryza brachyantha]
Length = 297
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/61 (55%), Positives = 47/61 (77%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRKE 355
F+KLK+ + G P+AFVDFKD SS++A+N LQ +LYSS G+ LEYAK+RMGL +++
Sbjct: 235 FIKLKMQNKFGAPVAFVDFKDANSSTEAINRLQGVILYSSTGEGVRLEYAKSRMGLRKRD 294
Query: 354 K 352
K
Sbjct: 295 K 295
>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 340
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P++FVDFKD+ S++ ALN+LQ T+LYSS G GM LEYAK+RMG+ RK
Sbjct: 279 FLKLKMQSTYGAPVSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKSRMGMRRK 338
Query: 357 EK 352
K
Sbjct: 339 PK 340
>ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| hypothetical protein
POPTR_0007s10740g [Populus trichocarpa]
Length = 323
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+D SS+ ALN+LQ T+LYSSV G G+ LEYAK+RMG+ RK
Sbjct: 262 FLKLKMQSTYGAPVAFVDFQDTASSTGALNHLQGTVLYSSVAGEGLRLEYAKSRMGMRRK 321
Query: 357 EK 352
+
Sbjct: 322 PR 323
>gb|ACF83035.1| unknown [Zea mays] gi|413934630|gb|AFW69181.1| hypothetical protein
ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRKE 355
F+KLK+ + G P+AFVDFKD SS++A+N LQ +LYSS GM LEYAK+RMGL +++
Sbjct: 244 FVKLKMQNKLGAPVAFVDFKDAISSTEAINRLQGVILYSSSGEGMRLEYAKSRMGLRKRD 303
Query: 354 K 352
K
Sbjct: 304 K 304
>ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cicer
arietinum]
Length = 326
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSS-VHGGMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ TLL+SS V GM LEYAK+RMG+ +K
Sbjct: 265 FLKLKMQSTYGAPVAFVDFQDVASSTGALNSLQGTLLHSSPVDEGMRLEYAKSRMGMRKK 324
Query: 357 EK 352
K
Sbjct: 325 PK 326
>ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein
SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHGGMHLEYAKARMGLPRKE 355
F+KLK+ + G P+AFVDFKD SS++A+N LQ +LYSS+ GM LEYAK+RMGL +++
Sbjct: 248 FVKLKMQNKLGAPVAFVDFKDSISSTEAINRLQGVILYSSLGEGMRLEYAKSRMGLWKRD 307
Query: 354 K 352
K
Sbjct: 308 K 308
>ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 338
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ T+L+SS G GM LEYAK+RMG+ RK
Sbjct: 276 FLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRLEYAKSRMGMRRK 335
>ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
[Glycine max]
Length = 339
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ T+L+SS G GM LEYAK+RMG+ RK
Sbjct: 277 FLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRLEYAKSRMGMRRK 336
>ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1
[Glycine max]
Length = 338
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ T+L+SS G GM LEYAK+RMG+ RK
Sbjct: 276 FLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRLEYAKSRMGMRRK 335
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+D S+ A+N+LQ T+LYSS G GM LEYAK+RMG+ RK
Sbjct: 266 FLKLKMQSTYGAPVAFVDFQDTACSTGAMNSLQGTILYSSPAGDGMRLEYAKSRMGMRRK 325
Query: 357 EK 352
K
Sbjct: 326 RK 327
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+D S+ ALN+LQ T+LYSS G GM +EYAK+RMGL RK
Sbjct: 272 FLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 331
Query: 357 EK 352
K
Sbjct: 332 PK 333
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+D S+ ALN+LQ T+LYSS G GM +EYAK+RMGL RK
Sbjct: 275 FLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 334
Query: 357 EK 352
K
Sbjct: 335 PK 336
>gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus vulgaris]
Length = 337
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+D SS++ALN+LQ ++L+SS G GM LEYAK+RMG+ +K
Sbjct: 276 FLKLKMQSTYGAPVAFVDFQDASSSTEALNSLQGSILHSSQTGEGMRLEYAKSRMGMRKK 335
Query: 357 EK 352
K
Sbjct: 336 PK 337
>ref|XP_006573645.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 333
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ T+L+SS G GM +EYAK+RMG+ +K
Sbjct: 271 FLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRMGMRKK 330
>ref|XP_006573644.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
[Glycine max]
Length = 335
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 534 FLKLKISIRGGFPIAFVDFKDVESSSKALNNLQNTLLYSSVHG-GMHLEYAKARMGLPRK 358
FLKLK+ G P+AFVDF+DV SS+ ALN+LQ T+L+SS G GM +EYAK+RMG+ +K
Sbjct: 273 FLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRMGMRKK 332