BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009693
         (2559 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   488   e-135
ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   483   e-133
gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe...   481   e-133
ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chlorop...   479   e-132
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   478   e-132
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   476   e-131
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   475   e-131
ref|XP_002332503.1| predicted protein [Populus trichocarpa]           474   e-131
gb|ESW32299.1| hypothetical protein PHAVU_002G310400g [Phaseolus...   474   e-130
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              474   e-130
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   474   e-130
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   473   e-130
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   473   e-130
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   473   e-130
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   473   e-130
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   471   e-130
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   471   e-130
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             469   e-129
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   467   e-128
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   467   e-128

>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  488 bits (1256), Expect = e-135
 Identities = 272/602 (45%), Positives = 352/602 (58%), Gaps = 7/602 (1%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRE-NYLPFGPTTMERPWTGKAPLPPS 1980
            V I   G+ Y + GAPFEF+YSYTETPK KPLKLRE  +LPFGP TM RPWTG+ PLPPS
Sbjct: 73   VKISDDGLSYVIEGAPFEFKYSYTETPKAKPLKLREPGFLPFGPVTMPRPWTGRPPLPPS 132

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF  PPP+KKGVK VQ PGP+ PG  PKYVRSREE+LGEPLT +E+K L+ S
Sbjct: 133  KKKLKEFDSFVLPPPHKKGVKPVQSPGPYLPGTSPKYVRSREEVLGEPLTKEEIKVLVQS 192

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C +S RQL++GRDG THNML+NIH HWKRRRVCKI+CLGV TVDMDN+C +LEEKTGGK+
Sbjct: 193  CLKSSRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCLGVCTVDMDNVCHQLEEKTGGKV 252

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+LYLFRGRNYNYKTR +FPLMLW+P+ PVYPKLIQ+ P GLT  EATE+R+KGR
Sbjct: 253  IYRRGGVLYLFRGRNYNYKTRPLFPLMLWKPVPPVYPKLIQRVPEGLTLEEATEMRQKGR 312

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC +G+NGVY NLV ++R+AFE CELVRI+C  L  SD+++I  KL+D VPC LLS
Sbjct: 313  TLTPICKIGKNGVYFNLVKNVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLS 372

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            + ++HIL+WRG+NW       DL  +       D +++N  A+                 
Sbjct: 373  YENEHILMWRGRNWKP--SLPDLRDDRKEANKVDPDNKNYKAL----------------- 413

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNF---DSSVQDEKTDCSFGSS 909
                  S  L V+  N+    N  AE +S +S  H    +F   D +V   +  C   +S
Sbjct: 414  -----PSEALDVSAPNL---HNNPAELVSNLS--HDTSISFCLDDVTVDKVEVPCPTKNS 463

Query: 908  EEENEVIKMAAINKHEESLVGCPSSSTPACSDEEFSQQNVQHFSNARGLEKQHAQDGVVV 729
            +    VI  A I       V   S   P          N+ H             DG  +
Sbjct: 464  KRSMSVIADAEITN-----VATDSYGEPEPCRSTSPGTNISH-------------DGGHI 505

Query: 728  AETDHYQSGLARLLSIGL--EANIPDHSSSGIVDNDS-TSLSDAGYEGPKNRISADHMVD 558
                +  S    +L I +  + +  D  S+ I  +D+    SD+   G       D   D
Sbjct: 506  TCPSNAMSDNHEMLDINIMDDKSFSDRLSTSISGSDAMLGSSDSNIYG-----MVDPRAD 560

Query: 557  RKNENESVVSIEAKNEQEKTVNSELEALWDQAIDSGRXXXXXXXXXXXDTILEKVAAFAK 378
               ++     +   +        E+  L +QA++ G            D I +   +FAK
Sbjct: 561  ELLDDSGATDVSPLSRSAVPCMKEISLLLEQAVEQGSALVLDKDSLDADNIYQTTVSFAK 620

Query: 377  NA 372
            +A
Sbjct: 621  SA 622


>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
            gi|548857270|gb|ERN15076.1| hypothetical protein
            AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  483 bits (1243), Expect = e-133
 Identities = 224/339 (66%), Positives = 275/339 (81%), Gaps = 1/339 (0%)
 Frame = -2

Query: 2159 GVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPP 1983
            G  +G HGV YK+  APFEFQYSYTETPKVKPL LRE  ++PFGP+TM RPWTG+APLPP
Sbjct: 300  GFSVGEHGVSYKLVNAPFEFQYSYTETPKVKPLALREPPFMPFGPSTMPRPWTGRAPLPP 359

Query: 1982 SKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLD 1803
            SKKK  EFDSFK PPP+KKGVK VQ PGP+ PG  P+YV+SREEILGEPLT++EV  L+ 
Sbjct: 360  SKKKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGTGPRYVKSREEILGEPLTTEEVNSLIR 419

Query: 1802 SCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGK 1623
            +C +S RQL++GRDGLTHNML+NIH HWKR R CKI+C GV TVDMDN+CE+LEEKTGGK
Sbjct: 420  TCLKSKRQLNMGRDGLTHNMLDNIHAHWKRLRACKIKCKGVCTVDMDNVCEQLEEKTGGK 479

Query: 1622 IIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKG 1443
            II+R GG+LYLFRGRNYNY+ R  FPLMLWRP+TPVYP+LI   P GLT  EA E+R+KG
Sbjct: 480  IIYRRGGVLYLFRGRNYNYRLRPRFPLMLWRPITPVYPRLIPLVPEGLTLEEAKEMRKKG 539

Query: 1442 RLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLL 1263
            R VPPIC L +NGVY +LV ++++AFE CELVRI+C  L  SD+K+I  KLKD VPCVL+
Sbjct: 540  RKVPPICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVLI 599

Query: 1262 SFSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESE 1146
            SF ++HIL+WRG++W S   +++  +E  T ++++  SE
Sbjct: 600  SFENEHILMWRGRDWTSSPSKLENDSE--TLEIAEVSSE 636


>gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  481 bits (1237), Expect = e-133
 Identities = 218/316 (68%), Positives = 264/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + +G  G+ Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGPTTM RPWTG+APLPPS
Sbjct: 149  ISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPLPPS 208

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+ PPP+KKGVK VQ PGP+ PG  PKYV+SR+EILG+PLT +EVKEL+  
Sbjct: 209  KKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVKG 268

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDG THNML+NIH HWKRRRVCKI+C GV TVDMDN+CE++EEKTGGKI
Sbjct: 269  CIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKI 328

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG++YLFRGRNYNYKTR  FPLMLWRP+TPVYP+L+Q+ P GLT  EATE+R+KGR
Sbjct: 329  IYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKGR 388

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY  L  + R+AFE CELVRI+CT +  SD+++I  KLKD VPCVL+S
Sbjct: 389  NLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLIS 448

Query: 1259 FSDQHILLWRGKNWVS 1212
            F  +HIL+WRG+ W S
Sbjct: 449  FELEHILMWRGREWKS 464


>ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine max]
          Length = 723

 Score =  479 bits (1232), Expect = e-132
 Identities = 267/611 (43%), Positives = 370/611 (60%), Gaps = 16/611 (2%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V I   G+ Y + GAPFEF+YSYTETPKVKP+K+RE  ++PFGP TM RPWTG+APLP S
Sbjct: 93   VKISDDGLSYVIDGAPFEFKYSYTETPKVKPIKMREAPFVPFGPDTMPRPWTGRAPLPAS 152

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF  PPP+KKGVK VQ PGP+  G  P+YV+SREEILGEPLT +E+++L+ S
Sbjct: 153  KKKLKEFDSFVLPPPHKKGVKPVQSPGPYLAGTGPRYVKSREEILGEPLTQEEIRDLVKS 212

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL+IGRDGLTHNML+NIH HWKRRR CKIRC GV TVDMDN+C +LEE+TGGKI
Sbjct: 213  CMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMDNVCHQLEERTGGKI 272

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            IHR GG+LYLFRGRNYNYKTR  FPLMLW+P+ PVYP+L+Q+ P GLT  EAT++R+KG 
Sbjct: 273  IHRKGGVLYLFRGRNYNYKTRPHFPLMLWKPVPPVYPRLVQRVPEGLTLEEATKMRQKGS 332

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +LV  +R+AFE CELVRI+C  L  SD+++I  KL+D VPC LLS
Sbjct: 333  TLIPICKLGKNGVYCDLVKTVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLS 392

Query: 1259 FSDQHILLWRGKNWVS--------LHERIDLSTEEITYQVSDNESENMTAISNSXXXXXX 1104
            F  +HIL+WRG NW S          E   +  +   Y+   +E+   +A S        
Sbjct: 393  FEYEHILMWRGPNWKSSIPDRGDDRKESKQIEVDHKNYKPLPSEALEFSAPSLQMNPLEH 452

Query: 1103 XXIL--DKNIKESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKT 930
               L  D +I  S+ +  TL   E + +P EN + +++S +++  +  + +D    ++ T
Sbjct: 453  ESNLLHDTSI-SSISSDVTLDKVEVS-YPNEN-SHQSMSGVTEVPSLTKIYDVETTNDST 509

Query: 929  DCSFGSSEEENEVIKMAAINKHEESLVGCPSSSTPACSDEEFSQQNVQHFSNARGLEKQH 750
            D S+   E    +I    I  ++              S  EFS         ++ + + H
Sbjct: 510  D-SYAEPEPRTSLIPSMTIPHYD--------------SHAEFS---------SKAMSESH 545

Query: 749  AQDGVVVAETDHYQSGLARLLSIGLEANI--PDHSSSGIVDNDSTSLSDAGYEGPKNRIS 576
              + ++  ++     GL+  +S G  A +   D+S++G+VD+ S  L DA          
Sbjct: 546  GTEHIM--DSKSCSDGLSASIS-GSHATLGGSDNSTNGMVDSHSNKLLDA---------- 592

Query: 575  ADHMVDRKNENESVVSIEAKNEQEKTVNSELEALW---DQAIDSGRXXXXXXXXXXXDTI 405
                          +  E  ++  ++    ++A+W   +QA++ G            D I
Sbjct: 593  --------------LGEEDVSQAPRSAAPSMKAIWLLLEQAVEKGSALVLDKDSLDADNI 638

Query: 404  LEKVAAFAKNA 372
             +   AFAK+A
Sbjct: 639  YQNTVAFAKSA 649


>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  478 bits (1230), Expect = e-132
 Identities = 219/343 (63%), Positives = 276/343 (80%), Gaps = 1/343 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V IG  G+ + + GAPFEF+YSYTETPKVKP+KLRE  Y PFGP+TM RPWTG+APLPPS
Sbjct: 142  VSIGDDGISFVIDGAPFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPS 201

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF  PPPNKKGVK +Q PGP+ PG  P+YV+SREEILGEPL ++EVKEL++ 
Sbjct: 202  KKKMKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNG 261

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+CE+LEE+TGGK+
Sbjct: 262  CLKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKV 321

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+L+LFRGRNYNYKTR  FPLMLW+P+TP+YP+LIQK P GLT  E +E+R+KGR
Sbjct: 322  IYRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGR 381

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC L +NGVY +LV ++R+AFE CELVR++C  +K SD+++I  KLK+ VPCVL+S
Sbjct: 382  KLMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLIS 441

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAI 1131
            F ++ IL+WRG+NW S               V + ++EN T+I
Sbjct: 442  FENESILMWRGRNWKS-----SFLKPAFNSGVEERDAENATSI 479


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  476 bits (1226), Expect = e-131
 Identities = 237/419 (56%), Positives = 301/419 (71%), Gaps = 1/419 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYL-PFGPTTMERPWTGKAPLPPS 1980
            + +  +GV Y+ P APF +QYSYTETPK+KP KLRE  + PFGP +M+RPWTG+ PLPPS
Sbjct: 144  IKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQRPWTGRKPLPPS 203

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKKR EFDSF+ PPP+KKGVK VQ PGPF  G  PKYV+SREE+LGEPLT +E+ EL++S
Sbjct: 204  KKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELINS 263

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            CK++ RQ++IGRDGLTHNMLENIH HWKR+RVCKI+C GV TVDMDN+CEKLEEKTGGKI
Sbjct: 264  CKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKI 323

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+  GG++YLFRGRNYNYKTR  FPLMLWRP+TPVYP+L+Q+ P GLT  EAT +R+KGR
Sbjct: 324  IYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTLEEATLMRKKGR 383

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC L +NGVY +LV ++R+AFE CELV I+C  L PSD+++I  KLKD VPCVL+S
Sbjct: 384  NLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAKLKDLVPCVLIS 443

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            F  +HIL+WRG++WVS      L  +       DN+S+     + S         L+  +
Sbjct: 444  FEQEHILMWRGRDWVS-----SLPEDR------DNDSDKAANTNRS---------LEVQV 483

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKTDCSFGSSEE 903
              S   S  L +TE N   T N++A T     ++   +R  D + +D   D    SS +
Sbjct: 484  VASTSGSPRLPITEMN---TCNLSANTFPLGEEESEYVRR-DGTKEDRSEDHYLESSNK 538


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  475 bits (1222), Expect = e-131
 Identities = 242/438 (55%), Positives = 307/438 (70%), Gaps = 2/438 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYL-PFGPTTMERPWTGKAPLPPS 1980
            + +  +GV Y+ P APF +QYSYTETPKVKP KLRE  + PFGP +M+RPWTG+ PLPPS
Sbjct: 144  IKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESMQRPWTGRKPLPPS 203

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK  EFDSF+ PPP+KKGVK VQ PGPF  G  PKYV+SREE+LGEPLT +E+ EL++S
Sbjct: 204  KKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELINS 263

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            CK++ RQ++IGRDGLTHNMLENIH HWKR+RVCKI+C GV TVDMDN+CEKLEEKTGGKI
Sbjct: 264  CKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKI 323

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+  GG++YLFRGRNYNY TR  FPLMLWRP+TPVYP+L+++ P GLT  EATE+R+KGR
Sbjct: 324  IYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGLTLEEATEMRKKGR 383

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC L +NGVY +LV ++R+AFE CELV I+C  L PSD+++I  KLKD VPCVL+S
Sbjct: 384  NLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIGAKLKDLVPCVLIS 443

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            F  +HIL+WRG++WVS       S  E      D ++  +   S S          +  +
Sbjct: 444  FEQEHILIWRGRDWVS-------SLPE------DGDNPEIREGSESVNAANTNRSFEVQV 490

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKTDCSFGSSEEE 900
              S   S++L VTE N   T N++A T   +  + A     D + +D   D      E  
Sbjct: 491  VASTAGSSSLPVTEVN---TYNLSANTF-PLGDEDAEYVRKDGTKEDRSED---HYPESS 543

Query: 899  NEV-IKMAAINKHEESLV 849
            N+V +    I+K E  LV
Sbjct: 544  NKVSVTTTGISKSEIPLV 561


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score =  474 bits (1221), Expect = e-131
 Identities = 255/556 (45%), Positives = 340/556 (61%), Gaps = 9/556 (1%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + +   GV Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGP TM RPWTG+APLPPS
Sbjct: 140  IKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPS 199

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK REFDSF  PPP+KKGVK VQ PGPF PG  P+Y ++REEILG+PLT +E++EL+D 
Sbjct: 200  KKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDG 259

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+C++LEE+TGGKI
Sbjct: 260  CLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKI 319

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA+ +R KGR
Sbjct: 320  IYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGR 379

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +LV ++R+AFE CELVRI+C  +  SDF++I  KL+D VPCVL+S
Sbjct: 380  KLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLIS 439

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            F  +HIL+WRG++W S            T  V+D +    ++I  +              
Sbjct: 440  FECEHILMWRGRDWKS----------SFTKPVNDGDEAKNSSIDGA-------------- 475

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKTDCSFGSSEEE 900
                 TSAT  +        E +  ET S        L+      +D+  D S      +
Sbjct: 476  -----TSATPLL--------EGLQNETFSVKDASTLNLKTSRMDAEDQGEDLS------Q 516

Query: 899  NEVIKMAAINKHEESLVGCPSSSTPACSDEEFSQQNVQHFSNARGLEKQHAQDGVVVAE- 723
             ++ +  A      +      S T   +D+  +    +    A G E Q+  +G  V+E 
Sbjct: 517  KDIDETFAAKIFISTSTEIYESKTTPDNDDSSAVTKSEAMRIASGSELQNVSEGSHVSEL 576

Query: 722  ---TDHYQSGLARLL----SIGLEANIPDHSSSGIVDNDSTSLSDAGYEGPKNRISADHM 564
                + Y  G+  LL     IG    +  +  +  V   + + + +   GP  R    + 
Sbjct: 577  AKLNESYTQGVLELLKQAVEIGSAVVLDANLDADAVYQKAVAFAQSAPPGPVFRRQPRNT 636

Query: 563  VDRKNENESVVSIEAK 516
            V +K+E +    +E K
Sbjct: 637  VVQKSEMQENGELEVK 652


>gb|ESW32299.1| hypothetical protein PHAVU_002G310400g [Phaseolus vulgaris]
          Length = 726

 Score =  474 bits (1219), Expect = e-130
 Identities = 258/598 (43%), Positives = 353/598 (59%), Gaps = 3/598 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V I   G+ Y + GAPFEF+YSYTETPK KP+K+RE  +LPFGP TM RPWTG+APLPPS
Sbjct: 97   VKISDDGLSYVIDGAPFEFKYSYTETPKAKPIKIREAPFLPFGPATMPRPWTGRAPLPPS 156

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+ PPP+KKGVK VQ PGP+  G  P+YV+SREEILGEPLT +E++EL++S
Sbjct: 157  KKKLKEFDSFELPPPHKKGVKPVQSPGPYLRGTGPRYVKSREEILGEPLTKEEIRELVNS 216

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDG THNML+NIH HWKRRRVCKIRCLGV TVDMDN+C++LEEKTGGK+
Sbjct: 217  CMKTQRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIRCLGVCTVDMDNVCQQLEEKTGGKV 276

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I R GG +YLFRGRNYN+KTR  FPLMLW+P++PVYP LI + P GLT  E T++R KGR
Sbjct: 277  IFRRGGKVYLFRGRNYNHKTRPRFPLMLWKPVSPVYPSLIPRVPKGLTLEEVTKMREKGR 336

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY+ LV+ +R+AFE C+LVRI+C  L  SD+++I  KL+D VPC L+S
Sbjct: 337  TLIPICQLGKNGVYYYLVNTVREAFEECDLVRINCQGLNKSDYRKIGAKLRDLVPCTLIS 396

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            F  +HIL+WRG NW S    +    +E    V D   E  ++                  
Sbjct: 397  FQYEHILMWRGPNWKSSIPDLGDDLKEANKIVDDKHFETRSS------------------ 438

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKTDCSFGSSEEE 900
             E++  SA   + +N +    N + +   +     A L   +    +E +  S     E 
Sbjct: 439  -EALEISAP-GLQKNPVEHASNFSHDASISSCSSAATLDKVEVPYPNENSRQSVSEVTEL 496

Query: 899  NEVIKMAAINKHEESLVGCPSSSTPACSDEEFSQQNVQHFSNARGLEKQHAQDGVVVAET 720
              + K+  +     +   C             +  N     ++R +   H  + ++ ++T
Sbjct: 497  TSLTKVYEVETANVATDSCAQPDPCTSPSPSMTFYNNSSEDSSRAMSDNHGAEDIMDSQT 556

Query: 719  DHYQSGLARLLSIGLEANIP--DHSSSGIVDNDSTSLSDAGYEGPKNRISADHMVDRKNE 546
                 GL+  +S G +AN+   D+  +G+VD  S  L DA  E   +++        K  
Sbjct: 557  --CCGGLSASIS-GSDANVGGGDNYINGMVDPHSDELLDALGEADVSQLPRSAAPCMK-- 611

Query: 545  NESVVSIEAKNEQEKTVNSELEALWDQAIDSGRXXXXXXXXXXXDTILEKVAAFAKNA 372
                               E+  L++QA++ G            D I +K  AFAK+A
Sbjct: 612  -------------------EILLLFEQAVEKGSALVLDKDSLDADNIYQKTVAFAKSA 650


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  474 bits (1219), Expect = e-130
 Identities = 221/340 (65%), Positives = 271/340 (79%), Gaps = 1/340 (0%)
 Frame = -2

Query: 2162 RGVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLP 1986
            RG+ IG  GV Y VPG PFE +YSYTETPKVKP+ LRE  +LPFGP TM RPWTG+APLP
Sbjct: 134  RGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLP 193

Query: 1985 PSKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELL 1806
            PSKKK +EFDSF+ PPP KK VK VQ PGPF PG  P+YVRSREEILGEPLT +E+KEL+
Sbjct: 194  PSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELV 253

Query: 1805 DSCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGG 1626
              C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ ++LEEKTGG
Sbjct: 254  QGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGG 313

Query: 1625 KIIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRK 1446
            K+I+  GG+L+LFRGRNYNY+ R  FPLMLW+P+TPVYP+L+Q+ P GLT  EA  +R+K
Sbjct: 314  KVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKK 373

Query: 1445 GRLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVL 1266
            GR + PIC L +NGVY +LV+++R+AFE CELVRI+C  L  SD+++I  KLKD VPCVL
Sbjct: 374  GRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVL 433

Query: 1265 LSFSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESE 1146
            +SF  +HIL+WRG +W  LH + +   +E   + SDN SE
Sbjct: 434  ISFEHEHILMWRGSDWKFLHPKPEDGCKEA--KESDNNSE 471


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  474 bits (1219), Expect = e-130
 Identities = 221/340 (65%), Positives = 271/340 (79%), Gaps = 1/340 (0%)
 Frame = -2

Query: 2162 RGVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLP 1986
            RG+ IG  GV Y VPG PFE +YSYTETPKVKP+ LRE  +LPFGP TM RPWTG+APLP
Sbjct: 134  RGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLP 193

Query: 1985 PSKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELL 1806
            PSKKK +EFDSF+ PPP KK VK VQ PGPF PG  P+YVRSREEILGEPLT +E+KEL+
Sbjct: 194  PSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELV 253

Query: 1805 DSCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGG 1626
              C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ ++LEEKTGG
Sbjct: 254  QGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGG 313

Query: 1625 KIIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRK 1446
            K+I+  GG+L+LFRGRNYNY+ R  FPLMLW+P+TPVYP+L+Q+ P GLT  EA  +R+K
Sbjct: 314  KVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKK 373

Query: 1445 GRLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVL 1266
            GR + PIC L +NGVY +LV+++R+AFE CELVRI+C  L  SD+++I  KLKD VPCVL
Sbjct: 374  GRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVL 433

Query: 1265 LSFSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESE 1146
            +SF  +HIL+WRG +W  LH + +   +E   + SDN SE
Sbjct: 434  ISFEHEHILMWRGSDWKFLHPKPEDGCKEA--KESDNNSE 471


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  473 bits (1217), Expect = e-130
 Identities = 237/434 (54%), Positives = 315/434 (72%), Gaps = 8/434 (1%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V +   G+ + V GAPFEF+YSYTETPK KP+KLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 144  VKLSEDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPS 203

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK REFDSFK PPP+KKGVK VQ PGPF PG  P+YV SREEILGEPLT++EVK L++ 
Sbjct: 204  KKKLREFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEG 263

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C+GV TVDMDN+C++LEE+TGGK+
Sbjct: 264  CLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKV 323

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG++YLFRGRNYNY+TR  FPLMLW+P+TPVYP+LI++ P GLT  EA+E+RRKGR
Sbjct: 324  IYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGR 383

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC L +NGVY NLV ++R+AFE CELVRIDC  +  SD++++  KLK+ VPC+L+S
Sbjct: 384  KLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLIS 443

Query: 1259 FSDQHILLWRGKNW-VSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKN 1083
            F  +HIL+WRG++W  S+ + ++ S E I   V+     + T+I++         +L+  
Sbjct: 444  FEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVN-----SATSIAS---------VLEDQ 489

Query: 1082 IKESVRTSATLTVTENNIFPTENV--TAETISTMSKQHAALRNFDSSVQ----DEKTDCS 921
            I E V     L+  + +  P  ++   AE  S +     A+    ++V+    +  T+  
Sbjct: 490  IMEIVSHEDGLSKPDMSTIPVGSMDEQAEHPSILDGTSVAIGASSTTVEMSEINPMTESG 549

Query: 920  FGSSEEENEVIKMA 879
              S+  E+EVI  A
Sbjct: 550  SSSAVSESEVINNA 563


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  473 bits (1217), Expect = e-130
 Identities = 227/435 (52%), Positives = 304/435 (69%), Gaps = 1/435 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V I   GV Y + GAPFEF+YSYTETPK KP+++RE  ++PFGP TM RPWTG+ PLPPS
Sbjct: 64   VKISEDGVSYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPS 123

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF  PPP+KKGVK VQ PGPF PG  P+YV SREE+LGEPLT +E+ EL+ S
Sbjct: 124  KKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRS 183

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
              +S RQL++GRDG  HNML+NIH HWKRRRVCKI+C+GV TVDMDN+C++LEEKTGGK+
Sbjct: 184  TLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKV 243

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG++YLFRGRNYN+KTR  FPLMLW+P+ PVYP+LIQ+ P GLT  EATE+R+KGR
Sbjct: 244  IYRRGGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGR 303

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY+NLV+++R+AFE CELVR++C  L  SD+++I  KL+D VPC LLS
Sbjct: 304  TLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLS 363

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            + ++HIL+WRG+NW S    +    +E T   +DN++                   DK +
Sbjct: 364  YENEHILMWRGRNWKSSFPDLVEDFKEATKADADNKN-------------------DKTL 404

Query: 1079 KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEKTDCSFGSSEEE 900
            +      +T ++  N +    N++ +T         ++      V  +K  C   +S++ 
Sbjct: 405  QSEALDVSTPSLNHNPVEHVSNLSHDT---------SISFCPDDVTVDKVPCPTKNSKQS 455

Query: 899  NEVIKMAAINKHEES 855
              V+  A++ K  E+
Sbjct: 456  MSVVADASLTKVYEA 470


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  473 bits (1216), Expect = e-130
 Identities = 216/316 (68%), Positives = 264/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + I   G+ Y + GAPFEF+YSYTE PK KPLKLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 150  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 209

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+ PPPNKKGVK VQ PGP+ PG  P+YV +REEILGEPLT++EV+EL++S
Sbjct: 210  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 269

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
             KRS RQL++GRDGLTHNML+NIH HWKRRR CKI+C GV TVDMDN+CE+LEE+TGGKI
Sbjct: 270  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 329

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EATE+R+KGR
Sbjct: 330  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 389

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +L  ++R+AFEVCELVRI+C  +  SD+++I  KL+D VPCVL+S
Sbjct: 390  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 449

Query: 1259 FSDQHILLWRGKNWVS 1212
            F  +HIL+WRG+ W S
Sbjct: 450  FEREHILMWRGQEWKS 465


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  473 bits (1216), Expect = e-130
 Identities = 216/316 (68%), Positives = 264/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + I   G+ Y + GAPFEF+YSYTE PK KPLKLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 156  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 215

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+ PPPNKKGVK VQ PGP+ PG  P+YV +REEILGEPLT++EV+EL++S
Sbjct: 216  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 275

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
             KRS RQL++GRDGLTHNML+NIH HWKRRR CKI+C GV TVDMDN+CE+LEE+TGGKI
Sbjct: 276  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 335

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EATE+R+KGR
Sbjct: 336  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 395

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +L  ++R+AFEVCELVRI+C  +  SD+++I  KL+D VPCVL+S
Sbjct: 396  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 455

Query: 1259 FSDQHILLWRGKNWVS 1212
            F  +HIL+WRG+ W S
Sbjct: 456  FEREHILMWRGQEWKS 471


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  471 bits (1213), Expect = e-130
 Identities = 253/563 (44%), Positives = 347/563 (61%), Gaps = 16/563 (2%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + +   GV Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGP TM RPWTG+APLPPS
Sbjct: 140  IKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPS 199

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK REFDSF  PPP+KKGVK VQ PGPF PG  P+Y ++REEILG+PLT +E++EL+D 
Sbjct: 200  KKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDG 259

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+C++LEE+TGGKI
Sbjct: 260  CLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKI 319

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA+ +R KGR
Sbjct: 320  IYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGR 379

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +LV ++R+AFE CELVRI+C  +  SDF++I  KL+D VPCVL+S
Sbjct: 380  KLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLIS 439

Query: 1259 FSDQHILLWRGKNWVSLHERIDLSTEEITYQVSDNESENMTAISNSXXXXXXXXILDKNI 1080
            F  +HIL+WRG++W S            T  V+D +    ++I  +         L +N 
Sbjct: 440  FECEHILMWRGRDWKS----------SFTKPVNDGDEAKNSSIDGATSATPLLEGL-QNE 488

Query: 1079 KESVRTSATLTVTENNIFP-------TENVTAETISTMSKQHAALRNFDSSVQDEKTDCS 921
              SV+ ++TL +  + +         ++    ET +       +   ++S    +  D S
Sbjct: 489  TFSVKDASTLNLKTSRMDAEDQGEDLSQKDIDETFAAKIFISTSTEIYESKTTPDNDDSS 548

Query: 920  FGSSEEENEVIKMAAINKHEESLVGCPSSSTPACSDEEFSQQNVQHFSNARGLEKQHAQD 741
              +  E   +   + +   +   +     +T   SD       ++   N   L  Q+  +
Sbjct: 549  AVTKSEAMRIASGSEVILDDRGYIDEMLITTSVESD-----TTLERIGNMEKL--QNVSE 601

Query: 740  GVVVAE----TDHYQSGLARLL----SIGLEANIPDHSSSGIVDNDSTSLSDAGYEGPKN 585
            G  V+E     + Y  G+  LL     IG    +  +  +  V   + + + +   GP  
Sbjct: 602  GSHVSELAKLNESYTQGVLELLKQAVEIGSAVVLDANLDADAVYQKAVAFAQSAPPGPVF 661

Query: 584  RISADHMVDRKNENESVVSIEAK 516
            R    + V +K+E +    +E K
Sbjct: 662  RRQPRNTVVQKSEMQENGELEVK 684


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  471 bits (1212), Expect = e-130
 Identities = 270/581 (46%), Positives = 355/581 (61%), Gaps = 29/581 (4%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYLPFGPTTMERPWTGKAPLPPSK 1977
            V +   GV Y + GAPFEF+YSYTETPKVKP+KLRE Y PFGPTTM RPWTG+APLPPSK
Sbjct: 145  VSLSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLREPYAPFGPTTMSRPWTGRAPLPPSK 204

Query: 1976 KKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDSC 1797
            KK  EFDSF+ PP NKKGVK VQ PGPF  G  PKYV SREEILGEPLT +E+K L+  C
Sbjct: 205  KKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKALIRGC 264

Query: 1796 KRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKII 1617
              S+RQL+IGRDGLTHNMLENIH  WKRRRVCKI+C GV TVDMDN+ ++LEE+TGGKII
Sbjct: 265  INSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKII 324

Query: 1616 HRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGRL 1437
            +  GG LYL+RGRNYNYKTR  FPLMLW+P  PVYP+L++  P GLT  E TE+R+KGR 
Sbjct: 325  YSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVTEMRKKGRK 384

Query: 1436 VPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLSF 1257
            + PIC LG+NGVY  LV  +R+AFE CELVRI+C  L  SDF++I  KLKD VPCVL+SF
Sbjct: 385  LIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCVLISF 444

Query: 1256 SDQHILLWRGKNWVSLHERIDLS--------TEEITYQVSDNESE-----NMTAISNSXX 1116
              +HILLWRG++W S    I+ +        T+E T      E +      +T++ +   
Sbjct: 445  ESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAPSIEQDVSVKNTLTSLDSEDL 504

Query: 1115 XXXXXXILDKNIKESVRT----SATLTVTENNIFPTENVTAETISTMSKQHAALRNFD-- 954
                    D  I E   +    S T T+ E+N F + +  A  +    K H A  + D  
Sbjct: 505  STGGNEDPDSMIAEKSISADVDSLTTTMHESN-FVSYDEEATGLDD-QKLHTATTSEDLD 562

Query: 953  --SSVQDEKTDCSFGSSEEENEVIKMAAINKHE-ESLVGCPSSSTPACSDEEFSQQNVQH 783
              S++   +++   G    +++  +   + + E +S+    +S T      E SQ   + 
Sbjct: 563  SWSTISGGESEIESGYEFSDSDFDEAEPMEQLEFDSIAATGNSETNGLYTSEGSQALTKP 622

Query: 782  FSNARGLEKQHAQDGVVVAETDHYQSGLARLL-SIGLEANIPDHSSSGIVDNDSTSLSDA 606
             SN        A DGV+       ++G A +L S  L+A++    S  +  + S   S  
Sbjct: 623  TSN--------ATDGVLQLLKQAVENGSAVVLDSSSLDADVIYQQS--VAFSQSAPPSPV 672

Query: 605  GYEGPKNRISADHMVDRKN------ENESVVSIEAKNEQEK 501
                 + +++AD   +  +      E E+ VS+E  N+++K
Sbjct: 673  FKHERRKKVAADKSEEETSRELEVKEEETAVSMEVGNDKKK 713


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  469 bits (1206), Expect = e-129
 Identities = 212/316 (67%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V +G  GV Y + GAPFEF+YSYTETPK +P+KLRE  Y PFGPTTM RPWTG+APLPPS
Sbjct: 156  VRVGEDGVSYVIDGAPFEFKYSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPS 215

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+  PP+KKGVK VQ PGPF PG  PKYV SREEILGEPLT +E+K+L++ 
Sbjct: 216  KKKLKEFDSFRLSPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEG 275

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C+++ RQ+++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ E+LEE+TGGKI
Sbjct: 276  CRKTKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKI 335

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+  GG+++LFRGRNYNY+TR  FPLMLW+P+TPVYP+L+++ P GLT  EA E+R+KG 
Sbjct: 336  IYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGH 395

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVYHNLV  +R+AFE CELVRI+C  +  SD+++I  KLKD VPCVLLS
Sbjct: 396  KLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLS 455

Query: 1259 FSDQHILLWRGKNWVS 1212
            F+ +HIL+WRG +W S
Sbjct: 456  FAFEHILIWRGCDWKS 471


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  467 bits (1202), Expect = e-128
 Identities = 213/316 (67%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            + IG  G+ Y + GAPFEF+YSYTETPK KP+KLRE  Y PFGPTTM RPWTG+APLP S
Sbjct: 149  ISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPAS 208

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            KKK +EFDSF+ PPP+KKGV+ VQ PGP+ PG  PKYV+SREEILG+PLT  EVK+L++ 
Sbjct: 209  KKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVNG 268

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDM+N+C++LEE+TGGKI
Sbjct: 269  CIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGKI 328

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+++LFRGRNYNYKTR  FPLMLWRP+TPVYP+LIQ+ P GLT  EATE+R+KGR
Sbjct: 329  IYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKGR 388

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PI  LG+NGVY +LV ++R+AFE CELVRIDC  +  SD+++I  KLKD VPCVL+S
Sbjct: 389  DLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLIS 448

Query: 1259 FSDQHILLWRGKNWVS 1212
            F  + IL+WRG+ W S
Sbjct: 449  FERESILMWRGREWKS 464


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  467 bits (1202), Expect = e-128
 Identities = 238/441 (53%), Positives = 306/441 (69%), Gaps = 16/441 (3%)
 Frame = -2

Query: 2156 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1980
            V +   G+ Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGPTTM RPWTG+APLP S
Sbjct: 135  VKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 1979 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 1800
            +K  REFDSF+ PP  KKG+K VQ PGPFRPG  P+YV S+EEILGEPLT +EV+EL+ S
Sbjct: 195  QKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTS 254

Query: 1799 CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 1620
            C ++ RQL++GRDGLTHNML NIH  WKRRRVCKI+C GV TVDMDN+CE+LEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKV 314

Query: 1619 IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEATELRRKGR 1440
            I+R GG+L+LFRGRNYN++TR  FPLMLW+P+ PVYP+LIQ+ P GLT  EAT +RRKGR
Sbjct: 315  IYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGR 374

Query: 1439 LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 1260
             + PIC LG+NGVY +LV ++++AFEVCELVRIDC  +K SDF++I  KLKD VPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVS 434

Query: 1259 FSDQHILLWRGKNWVS----------LHERIDLST---EEITYQVSDNESENMTAISNSX 1119
            F ++ IL+WRG+ W S          + E I++ T   E+    VS N+S+ MT      
Sbjct: 435  FENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQTMTQNPPLD 494

Query: 1118 XXXXXXXILDKNIKESVRTSATLTVTENNI--FPTENVTAETISTMSKQHAALRNFDSSV 945
                       ++  S   S+ +  T N++  + T++VT  T+ +       LR+ +   
Sbjct: 495  SMELQNDPDGHDLSPSTVDSSEMEGTINSLQSWSTKDVTEPTVDSF------LRDLEEPE 548

Query: 944  QDEKTDCSFGSSEEENEVIKM 882
             + +T         E  +I M
Sbjct: 549  DEPETSEEISKQSIERVLILM 569