BLASTX nr result

ID: Ephedra28_contig00009674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009674
         (423 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                              97   2e-18
gb|ABR16492.1| unknown [Picea sitchensis]                              83   4e-14
gb|ABR17776.1| unknown [Picea sitchensis]                              82   7e-14

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 7/142 (4%)
 Frame = -3

Query: 409 WDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKAEDL--CKDFTSLSR 236
           WDFSAY NKLL  L+ L  R+E   ++ T K++IRFGKQL +G    D     D  SL R
Sbjct: 180 WDFSAYGNKLLSCLQFLRSRDE--ETTRTVKLMIRFGKQLLNGPNLYDQLGSGDLISLQR 237

Query: 235 MMDLYGQNHILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKISVHC-----IQSFRR 71
           + ++Y Q  +   FS+ACS+ A+ A++ +LE  L +VKVSS+ KIS+H      +   +R
Sbjct: 238 LQEVYRQKRMNYIFSTACSETALRAVRLQLE-QLEYVKVSSRKKISIHVADLEDLGRAQR 296

Query: 70  FNVSLRFEGEDEKDSNNEVRRI 5
           FNVS+R +  +    N+E++RI
Sbjct: 297 FNVSVRCDSNEGLLQNSEIKRI 318


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
 Frame = -3

Query: 409 WDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKAEDLCKD-----FTS 245
           WDFSAYK KLLP L+ L  +++   ++   K++IRFGKQLF G    +LC       F S
Sbjct: 189 WDFSAYKAKLLPCLQFLRSQDQ--ETTRAIKLMIRFGKQLFDG---PNLCDQFHNGGFVS 243

Query: 244 LSRMMDLYGQNHILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKISVHCIQ------ 83
           L+ + +L+    +   FS+ACS   +T L+ +LE +  +VKVSS+ KIS+          
Sbjct: 244 LAHLQELFRGRRLNYFFSTACSKMVVTDLRLQLEHT-EYVKVSSRKKISLQVADLEDLEE 302

Query: 82  -SFRRFNVSLRFEGEDEKDSNNEVRRI 5
              +RFNVS+R + +     N+E++RI
Sbjct: 303 GHPQRFNVSIRCDDKQGSLHNSELKRI 329


>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
 Frame = -3

Query: 409 WDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKAEDLCK-----DFTS 245
           WDFSAYK KLLP L+ L  +E+   ++   K++IRFGKQLF G    +LC       F S
Sbjct: 40  WDFSAYKAKLLPCLQFLRSQEQ--ETTRAIKLMIRFGKQLFDG---PNLCDQFHNGSFVS 94

Query: 244 LSRMMDLYGQNHILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKISVHCIQ------ 83
           L+ + +L+    +   FS+ACS   +T L+ + E +  +VKVSS+ KIS+          
Sbjct: 95  LAHLQELFRGRRLNYFFSTACSKMVVTDLRLQFEHT-EYVKVSSRKKISLQVADLEDLEE 153

Query: 82  -SFRRFNVSLRFEGEDEKDSNNEVRRI 5
              +RFNVS+R +       N+E++RI
Sbjct: 154 GHPQRFNVSIRCDDNQGSLHNSELKRI 180


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