BLASTX nr result

ID: Ephedra28_contig00009668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009668
         (984 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006401891.1| hypothetical protein EUTSA_v10015993mg [Eutr...    61   6e-07
ref|XP_004513734.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    60   2e-06
ref|XP_006286758.1| hypothetical protein CARUB_v10003199mg [Caps...    59   3e-06

>ref|XP_006401891.1| hypothetical protein EUTSA_v10015993mg [Eutrema salsugineum]
           gi|557102981|gb|ESQ43344.1| hypothetical protein
           EUTSA_v10015993mg [Eutrema salsugineum]
          Length = 423

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 76/271 (28%), Positives = 117/271 (43%), Gaps = 13/271 (4%)
 Frame = +3

Query: 120 SYKCAVICSVLSKRWTNLYKMLPCLYLDDYEFFVVHDGGSNFEEKKPWVYEIAAAAIFRH 299
           S K  V  S+LS RW NL++ +P L L+ Y +F  HD   +F         + A   F  
Sbjct: 20  STKDVVKTSLLSSRWRNLWRFVPGLSLE-YSYFRKHDAFVSF---------VDAFLGFNS 69

Query: 300 QAQVHSLHLRTCWNF---QNWKWCIEHFTDHNIQHLYLSLGDYDCASQHIPSCIFTCTSL 470
            + +    L+  W++    + K  I+      IQHL+++  D++     IP  I+TC SL
Sbjct: 70  DSCMQKFKLKCNWDYVFKADVKRWIDTVAKRRIQHLHVADIDWEDDEMQIPPTIYTCESL 129

Query: 471 VTLNLTIYQMPEDINLKTLHGFPNLRHCRLFLDMFDEYQHVYEWLDLLSCKCPLLQYLKV 650
           V+LN+    +P    LK +   P L+   L    F         L+ L   CP+L+ L +
Sbjct: 130 VSLNIYGITLP---TLKFV-SLPCLKAIVLDTVKFSGDSA----LETLILGCPVLERLYI 181

Query: 651 EIDFPGLESRTAPFVFKSSSLLNLKI--YLINAMSSTLLKVILQTPELLNLNLRCHSK-- 818
           E     L   T     +S SLL+  I  Y  N     L+ V +  P L  L L  H    
Sbjct: 182 E---RNLCDYTEVLRVRSQSLLSFTIIAYSHNTYVEDLV-VAIDAPRLKYLRLCDHRTAS 237

Query: 819 ---NPPG---KVEVQAMAPKLLKISVPKSDV 893
              N  G   K ++ ++   LLK+    +D+
Sbjct: 238 FLLNNMGSLVKADIDSLFNLLLKMKFDPNDI 268


>ref|XP_004513734.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78760-like
           [Cicer arietinum]
          Length = 354

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
 Frame = +3

Query: 120 SYKCAVICSVLSKRWTNLYKMLPCLYLDDYEFFVVHDGGSNFEEKKPWVYEIAAAAIFRH 299
           S K +V   VLS RW NL+K LP L L  Y  F    G + F  +          ++  H
Sbjct: 33  SAKESVQTCVLSTRWKNLWKYLPTLTLKSYSHFKTLKGFTKFVSR--------ILSLRDH 84

Query: 300 QAQVHSLHLRTCWNFQN--WKWCIEHFTDHNIQHLYLSLGDYDCASQHIPSCIFTCTSLV 473
              +H+LH       Q    +  I++   HN+Q + + +    C  QH P C F+C +L 
Sbjct: 85  STALHTLHFHHHGIVQPNLLRRLIKYAVSHNVQQMRIHV---YCDIQHFPPCFFSCQTLT 141

Query: 474 TLNLTIYQMPEDINLKTLHGF 536
           +LNL + Q P     +TL  +
Sbjct: 142 SLNLYVDQ-PRSFPHRTLFSY 161


>ref|XP_006286758.1| hypothetical protein CARUB_v10003199mg [Capsella rubella]
           gi|482555464|gb|EOA19656.1| hypothetical protein
           CARUB_v10003199mg [Capsella rubella]
          Length = 463

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
 Frame = +3

Query: 126 KCAVICSVLSKRWTNLYKMLPCLYLDDYEFFVVHDGGSNFEEKKPWVYEIAAAAIFRHQA 305
           K AV   VLSKRW +L+  +P L L   EF     G S F        +I+       + 
Sbjct: 37  KVAVRTCVLSKRWKSLWLSVPLLDLGVEEF---RAGYSEFARVLHSFLDIS------RET 87

Query: 306 QVHSLHLRTCWNFQNWKWCIEHFTDHN-----IQHLYLSLGDYDCASQHI-----PSCIF 455
           ++H L L    N ++  +  +    HN     +QHL +++    C++ ++     P C++
Sbjct: 88  RIHKLILYLTRNQRDQSYLTQWI--HNAVMLKVQHLDINI----CSASYVGTKLMPLCLY 141

Query: 456 TCTSLVTLNLTIYQMPEDINLKTLHGFPNLRHCRLFLDMFDEYQHVYEWLDLLSCKCPLL 635
           TC +L++L L    +P+  N+      P L+     + + D        L+ L   CP+L
Sbjct: 142 TCETLLSLKLYHVALPDFENV----SLPRLK----IMHLNDNIYTSDALLENLISSCPVL 193

Query: 636 QYLKVEIDFPGLESRTAPFVFKSSSLLNLKIYL----INAMSSTLLKVILQTPELLNLNL 803
           + LKV   + G+E+       +  SL +L+I+L      A      KV++  P L  LNL
Sbjct: 194 EDLKV-FRYVGIENVVKVLRVRCQSLKSLQIFLHSVWYQASEDDDCKVVIDAPGLSCLNL 252

Query: 804 RCH 812
             H
Sbjct: 253 EDH 255


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