BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009660
         (1596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001773955.1| predicted protein [Physcomitrella patens] gi...   592   e-166
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   585   e-164
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   583   e-164
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   583   e-164
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...   582   e-163
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   581   e-163
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   578   e-162
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   577   e-162
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   577   e-162
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              572   e-160
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   565   e-158
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   563   e-158
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   559   e-156
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...   545   e-152
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...   542   e-151
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...   540   e-151
ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr...   534   e-149
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA...   532   e-148
gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlise...   531   e-148
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   530   e-148

>ref|XP_001773955.1| predicted protein [Physcomitrella patens] gi|162674799|gb|EDQ61303.1|
            predicted protein [Physcomitrella patens]
          Length = 1199

 Score =  592 bits (1526), Expect = e-166
 Identities = 287/540 (53%), Positives = 400/540 (74%), Gaps = 8/540 (1%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            YF+ERGL+ AV  L+ +E++   SG  LR+W+E+P +  P K+      +QRL+P ECR 
Sbjct: 55   YFVERGLEEAVRRLQPIELKHPISGTSLRLWVEKPNVSPPMKDLGSQALDQRLLPSECRL 114

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            AG++Y+G F  D+C QWN+GVV+R    +G++P+M++SS+CHL+ L   QLV  +EE TE
Sbjct: 115  AGLTYRGIFTADICMQWNNGVVVRHNISYGKMPVMVKSSVCHLRGLNQKQLVAAKEEATE 174

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVV-RCTRTDQSSVTA 1066
            +GGYFICNG ER+IRLLI PKRN+ + V+R +Y+NRG  Y+DK V++ RC R DQS+VT 
Sbjct: 175  MGGYFICNGNERIIRLLIMPKRNYVVGVKRTSYKNRGPSYSDKGVMISRCVRPDQSAVTM 234

Query: 1065 RLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVG 886
            R+YY+ +GSAS+GFS+RR+E+LIPVG+ILKALI+  + EI++QL S+  S S+  KG +G
Sbjct: 235  RMYYMNYGSASLGFSVRRQEFLIPVGIILKALIESNEYEIYEQLMSI-QSDSKAMKGALG 293

Query: 885  TEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILV 706
            ++FV+QRA IIL+EV+Q +++T+ + L+F+G      L         +VGE ++ +YILV
Sbjct: 294  SQFVSQRAKIILEEVRQLSLFTRHDCLQFLGGLTCYFLLVK------SVGEQVLNDYILV 347

Query: 705  HLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLF 526
            HLD+  DKFN L+FMLQKLFALVDG AAPDN D LQN E LLPGHLLTI +K+++Q+WL 
Sbjct: 348  HLDNPLDKFNLLVFMLQKLFALVDGMAAPDNADALQNHEILLPGHLLTIVVKDRIQDWLL 407

Query: 525  KVKSVLDKEINDDKQKFDLQD-----MARVKKAMEKIYTDGVGRSVENMINTGNLTXXXX 361
            +V+  L KE+ +   + DLQ      +  V+K  EK+    V + VE ++NTGNL     
Sbjct: 408  RVQGQLLKEMKEKPAENDLQQPIDVTVKHVQKVFEKVPASDVSKKVEYLLNTGNLVSQSG 467

Query: 360  XXXXXXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPD 181
                   G T+VAE+LNF R+LSHFRS+HRG++F  +RTTTVRKLLPESWGF+CPVHTPD
Sbjct: 468  LDLNQVGGFTLVAEKLNFLRYLSHFRSVHRGAFFATLRTTTVRKLLPESWGFMCPVHTPD 527

Query: 180  GTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPEY 1
            G+PCGLLNHLT  C+I++D+DA G+ KDP+ IRK++T V+++LG++P LP++S + PPEY
Sbjct: 528  GSPCGLLNHLTAACQISSDLDARGNKKDPLAIRKSVTKVMVNLGLVPVLPKLSNMAPPEY 587


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score =  585 bits (1508), Expect = e-164
 Identities = 284/533 (53%), Positives = 385/533 (72%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y  + GL++ + +++ +E+    +  KLR+WL+ P ++ P KE       + L+P+ECRQ
Sbjct: 27   YMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+  +DVCFQ+NDG +IRE   FG+ PIML+S LC+L+   P +LV  REE +E
Sbjct: 87   AKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNLRGADPQKLVSYREEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI NG ER+IRLLI PKRNHP+++ RN++ +R   YTDKA+V+RC R DQSS++ R
Sbjct: 147  MGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDKAIVIRCVRADQSSLSVR 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+  L S  N   +  KG VGT
Sbjct: 207  LYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDE++  +++T+ + L++IGE F+ V+  ++  S   V EA++K+ ILVH
Sbjct: 267  QLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKNDSYPIVAEAVLKDCILVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ +KEKL++WL K
Sbjct: 327  LDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             K +L  EI+   +KFD  D+ +VKK M+K     V  +VENM+ TG L           
Sbjct: 387  GKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RF+SHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T   +IT+  D++G+VKD  KI+ ++  VL+++GM PSLP++   GPPE
Sbjct: 507  LNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPE 559


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  583 bits (1502), Expect = e-164
 Identities = 282/533 (52%), Positives = 386/533 (72%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y ++ GLD+ + +++ VE+    +  KLR+WL+ P ++ P KE       + L+P+ECRQ
Sbjct: 27   YMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+  +DVCFQ+NDG +IRE   FG+ PIML+S LC+L+   P +LV  +EE +E
Sbjct: 87   AKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNLRGADPQKLVSYKEEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI NG ER++RLLI PKRN+P+++ RN++ +R   YTDKAVV+RC R DQSS++ R
Sbjct: 147  MGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVR 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+  L S  N   +  KG VGT
Sbjct: 207  LYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDE++  +++T+ + L++IGE F+ V+  ++  S   V +A++K+ ILVH
Sbjct: 267  QLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ +KEKL++WL K
Sbjct: 327  LDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             + +L  EI+   +KFD  D+ +VKK M+K     V  +VENM+ TG L           
Sbjct: 387  GRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RFLSHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T   +IT+  D++G++KD  KI+ ++  VL+++GM PSLP++   GPPE
Sbjct: 507  LNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPE 559


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  583 bits (1502), Expect = e-164
 Identities = 282/533 (52%), Positives = 386/533 (72%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y ++ GLD+ + +++ VE+    +  KLR+WL+ P ++ P KE       + L+P+ECRQ
Sbjct: 27   YMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+  +DVCFQ+NDG +IRE   FG+ PIML+S LC+L+   P +LV  +EE +E
Sbjct: 87   AKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNLRGADPQKLVSYKEEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI NG ER++RLLI PKRN+P+++ RN++ +R   YTDKAVV+RC R DQSS++ R
Sbjct: 147  MGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVR 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+  L S  N   +  KG VGT
Sbjct: 207  LYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDE++  +++T+ + L++IGE F+ V+  ++  S   V +A++K+ ILVH
Sbjct: 267  QLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ +KEKL++WL K
Sbjct: 327  LDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             + +L  EI+   +KFD  D+ +VKK M+K     V  +VENM+ TG L           
Sbjct: 387  GRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RFLSHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T   +IT+  D++G++KD  KI+ ++  VL+++GM PSLP++   GPPE
Sbjct: 507  LNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPE 559


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  582 bits (1500), Expect = e-163
 Identities = 282/533 (52%), Positives = 387/533 (72%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            + ++ GL++ +L+++ +E+    +  KLR+WLE P ++ P KE       + L+P+ECRQ
Sbjct: 27   HMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKERISKTMREALLPFECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+  +DVCFQ+NDG VIRE   FG+ PIML+S LC+L+   P +LV  +EE +E
Sbjct: 87   AKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCNLRGADPKKLVSCKEEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI NG ER+IRLLI PKRN+P+++ R+++ +R   YTDKAVV+RC R DQSS++ R
Sbjct: 147  MGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTDKAVVIRCVRADQSSLSIR 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF LR REYL+PVG++LKALID TD EI+  L S  N      KG VGT
Sbjct: 207  LYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVNLTSCYNEKYAKGKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDE++  +++T+R+ L++IGE F+ ++  + + S   V +A++K+ ILVH
Sbjct: 267  QLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMKDSYAIVADAVLKDCILVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+++ IKEKL++WL K
Sbjct: 327  LDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLISLYIKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             K +L  EI     KFD  D+A+VKK M+K     V  SVEN++ TG L           
Sbjct: 387  GKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVENLLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RF+SHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T  C+IT+  D++G++KD  KI+K++  +L+++GM  SLP++   GPPE
Sbjct: 507  LNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSSLPKIFLPGPPE 559


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score =  581 bits (1497), Expect = e-163
 Identities = 284/534 (53%), Positives = 388/534 (72%), Gaps = 3/534 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGN--KLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y ++ GL++ +LN++ +EI  S +  KLR+W  +P +F P KE A       L P+ECRQ
Sbjct: 41   YMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQ 100

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQ-LVGLREEPT 1246
            A ISY G+F +D+CFQ+ DG VIRE+  FG+ PIML+S LCHL+     + LV  +EEP+
Sbjct: 101  AKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPS 160

Query: 1245 EVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTA 1066
            E+GGYFI  G ER+IRL+I PKRN+P ++ RN++R+R   Y+DKAVV+RC R DQS+V+ 
Sbjct: 161  EMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSL 220

Query: 1065 RLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVG 886
            +LYYL +GSA +GF ++ REYL+PVG+ILKAL+D TD EI+  L    N      KG VG
Sbjct: 221  KLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVG 280

Query: 885  TEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILV 706
            T+ V +RA IILDEV+  +++T+ + L+ IGE F+ V+ GM+  S   V +A++++YI V
Sbjct: 281  TQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFV 340

Query: 705  HLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLF 526
            HLD+  DKFN LIFMLQKLF+L+D T+  DNPD+LQNQE LLPGHL+TI +KEKLQ+WL 
Sbjct: 341  HLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLL 400

Query: 525  KVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXX 346
            K++  L +E + +K+KF+L  +  VKKA+EK     +G ++E+M+ TG L          
Sbjct: 401  KLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQ 460

Query: 345  XXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCG 166
              GMTV AE+LNF RFLSHFR++HRG+ F  +RTT+VRKLLPESWGFLCPVHTPDG PCG
Sbjct: 461  RAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCG 520

Query: 165  LLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LLNH+T +C+IT+  D++G+VKD  K+R ++  VLI +GM PS P++ Q GPPE
Sbjct: 521  LLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPSSPKLVQAGPPE 574


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like,
            partial [Cucumis sativus]
          Length = 948

 Score =  578 bits (1489), Expect = e-162
 Identities = 281/534 (52%), Positives = 387/534 (72%), Gaps = 2/534 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            + ++ GL++ + +++ VEI  S    KLR+WL +P ++ P KE       + L+PYECRQ
Sbjct: 27   HLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+F  DVCFQ+++  VIRE+  FG+ PIML+S LCHL+ L P +LV   EE +E
Sbjct: 87   AKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSKLCHLRGLDPKKLVSYNEEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYF+ NG ER++RLLIAPKRN+P ++ RN++ +R   YTDKAVV+RC R DQSSVT +
Sbjct: 147  MGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVK 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF ++ +EYL+P+GV+LKALID TD EI+  L S  +      KG VGT
Sbjct: 207  LYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDEV+   ++  R+ L  IG+ F+ V+EG+ ++    V +A++K+YI VH
Sbjct: 267  QLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFM QKLF+L+D T+ PDNPD+LQNQ+ LLPG L+T+ +KEKL++WL K
Sbjct: 327  LDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPGQLITLYLKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
            VK +L+ EI++  + F+   +A VKK M+K  +  V  +VENM+ TG L           
Sbjct: 387  VKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RF+SHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPEY 1
            LNHLT  C+IT+  +++G V+D  KIR ++ +VLI +GMIPSLP++ Q+G P++
Sbjct: 507  LNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGLPDF 560


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  577 bits (1488), Expect = e-162
 Identities = 281/534 (52%), Positives = 387/534 (72%), Gaps = 2/534 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            + ++ GL++ + +++ VEI  S    KLR+WL +P ++ P KE       + L+PYECRQ
Sbjct: 27   HLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQ 86

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G+F  DVCFQ+++  VIRE+  FG+ PIML+S LCHL+ L P +LV   EE +E
Sbjct: 87   AKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLCHLRGLDPKKLVSYNEEASE 146

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYF+ NG ER++RLLIAPKRN+P ++ RN++ +R   YTDKAVV+RC R DQSSVT +
Sbjct: 147  MGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVK 206

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF ++ +EYL+P+GV+LKALID TD EI+  L S  +      KG VGT
Sbjct: 207  LYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGT 266

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDEV+   ++  R+ L  IG+ F+ V+EG+ ++    V +A++K+YI VH
Sbjct: 267  QLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVH 326

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFM QKLF+L+D T+ PDNPD+LQNQ+ LLPG L+T+ +KEKL++WL K
Sbjct: 327  LDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPGQLITLYLKEKLEDWLQK 386

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
            VK +L+ EI++  + F+   +A VKK M+K  +  V  +VENM+ TG L           
Sbjct: 387  VKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQR 446

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLNF RF+SHFR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 447  AGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 506

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPEY 1
            LNHLT  C+IT+  +++G V+D  KIR ++ +VLI +GMIPSLP++ Q+G P++
Sbjct: 507  LNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGLPDF 560


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score =  577 bits (1486), Expect = e-162
 Identities = 281/534 (52%), Positives = 387/534 (72%), Gaps = 3/534 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGN--KLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y ++ GL++ +LN++ +EI  S +  KLR+W  +P +F P KE A       L P+ECRQ
Sbjct: 36   YMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKERASKTMHDALYPFECRQ 95

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGP-HQLVGLREEPT 1246
            A +SY G+F +D+CFQ+ DG VIRE+  FG+ PIML+S LCHL+      +L+  +EEP+
Sbjct: 96   AKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPS 155

Query: 1245 EVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTA 1066
            E+GGYFI  G ER+IRL+I PKRN+P ++ RN++R+R   Y+DKAVV+RC R DQS+V+ 
Sbjct: 156  EMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSL 215

Query: 1065 RLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVG 886
            +LYYL +GSA +GF ++ REYL+PVG+ILKAL+D TD EI+  L    N      KG VG
Sbjct: 216  KLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVG 275

Query: 885  TEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILV 706
            T+ V +RA IILDEV+  +++T+ + L+ IGE F+ V+ GM+  S   V +A++++YI V
Sbjct: 276  TQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFV 335

Query: 705  HLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLF 526
            HLD+  DKFN LIFMLQKLF+L+D T+  DNPD+LQNQE LLPGHL+TI +KEKLQ+WL 
Sbjct: 336  HLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLL 395

Query: 525  KVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXX 346
            K++  L +E + +K+KF+L  +  VKKA+EK     +G ++E+M+ TG L          
Sbjct: 396  KLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQ 455

Query: 345  XXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCG 166
              GMTV AE+LNF RFLSHFR++HRG+ F  +RTT+VRKLLPESWGFLCPVHTPDG PCG
Sbjct: 456  RAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCG 515

Query: 165  LLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LLNH+T +C+IT+  D++G+VKD  K+R ++  VLI +GM P  P++ Q GPPE
Sbjct: 516  LLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPPSPKLVQGGPPE 569


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  572 bits (1475), Expect = e-160
 Identities = 275/522 (52%), Positives = 377/522 (72%), Gaps = 4/522 (0%)
 Frame = -1

Query: 1557 LRSVEIRQSG----NKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQAGISYKGRFYL 1390
            ++S+ I  +G     ++ +W  +P ++ P KE +       L P+ECRQA ISY G+   
Sbjct: 1    MKSLFITHNGVFFLTRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLA 60

Query: 1389 DVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYE 1210
            DVCFQ+ +GV IRE+   G+ PIML+S LCHL+   P +LV  +EE +E+GGYFI NG E
Sbjct: 61   DVCFQYGNGVAIREKFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLE 120

Query: 1209 RLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASI 1030
            R++RLLI PKRN+P+++ RN++R+R   YTDKAVV+RC R DQS+VT +LYYL++GSA +
Sbjct: 121  RVVRLLILPKRNYPMSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARL 180

Query: 1029 GFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIIL 850
            GF ++ REYL+PVGV+LKALID TD EI++ L    +   +G KG VGT+ V +R  IIL
Sbjct: 181  GFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIIL 240

Query: 849  DEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFL 670
            DEV+  +++T+ + L+ IGE F+ V++G+E +S   V +A+++EYI VHLD+  DKFN L
Sbjct: 241  DEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLL 300

Query: 669  IFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEIND 490
            IFM+QKLF+L+D T+ PDNPD LQNQE LLPGHL+TI +KEKLQEWL+K + +L  EIN 
Sbjct: 301  IFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEIN- 359

Query: 489  DKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXXXGMTVVAERLN 310
             ++ F+   +A VKK M+K  +  +  +VENM+ TG L            GMTV AERLN
Sbjct: 360  KRKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLN 419

Query: 309  FFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKIT 130
            F RFLSHFR++HRG+ F  +RTT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+   C+IT
Sbjct: 420  FLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRIT 479

Query: 129  TDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            +  D+ G+ +D  KIR ++ +VLI +GM P+LP++ Q GPPE
Sbjct: 480  SYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPE 521


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  565 bits (1455), Expect = e-158
 Identities = 274/533 (51%), Positives = 373/533 (69%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGNK--LRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            Y ++ GLD  +  ++ V+I  S +   LR+WL+ P ++ P K+ +       L P+ECRQ
Sbjct: 34   YMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKDRSSKTSAGALYPFECRQ 93

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G F++DVCFQW+ GVV+RE+  FG  PIML+S  C+L++  P +LV  +EE  E
Sbjct: 94   AKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCYLREADPRKLVACKEESRE 153

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI NG ER++RLLI PKRN+P+++ RN++R+R   YTDKAVV+RC R D SSVT +
Sbjct: 154  MGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDKAVVIRCVRGDLSSVTVK 213

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL +GSA +GF ++ REY++PVG+ILKALID  D EI+ +L    N  +   KG VGT
Sbjct: 214  LYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKLTCCYNEKNGEGKGAVGT 273

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDEV+   ++TQ + L+ IGE F+ ++EGME +S   V + +++ YI VH
Sbjct: 274  QLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESESYSTVADVVLRNYIFVH 333

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD   DKFN LIFM+QKLF+L+D T+APDN D+LQNQE LLPGHL+TI +KEKL++WL K
Sbjct: 334  LDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPGHLITIYLKEKLEDWLRK 393

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             K +++  IN+  + FD   M  VKK MEK     V  ++EN++ TG L           
Sbjct: 394  GKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENLLKTGRLITQTGLDLQQR 453

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AERLN+ RFLS FR +HRG+ F  +RTT+VRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 454  AGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGL 513

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T  C+IT+  ++ G+++D  KIR ++  VL+ +GM  S P+V   GPP+
Sbjct: 514  LNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSWPKVDHAGPPQ 566


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score =  563 bits (1451), Expect = e-158
 Identities = 269/533 (50%), Positives = 381/533 (71%), Gaps = 2/533 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQ 1423
            + ++ GL +  + ++ +E+        L++ ++ P IF P KE    +    L P+ECRQ
Sbjct: 33   HMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKERGFSKSRNILYPFECRQ 92

Query: 1422 AGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
            A ISY G F  ++CFQ+++G ++RE+  FG+ PIML+S LC+L+   P +LV  +EE +E
Sbjct: 93   AKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLCNLRGASPKKLVSYKEEASE 152

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            VGGYFI NG ER++RLLI PKRN+P++  R+++  R   YTDKAVV+RC R DQ+SV+ +
Sbjct: 153  VGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTDKAVVIRCVRADQTSVSIK 212

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYYL++GSA +GF +  REY++PVG++LKALID TD EI+  L S  N   +  KG VGT
Sbjct: 213  LYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVNLTSCYNEKYEKGKGAVGT 272

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +RA IILDEV+  +++T+ + L++IGE F+ +L+G++ +S   V +A++++YILVH
Sbjct: 273  QLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKNESHHIVADAVLRDYILVH 332

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIFMLQKLF+L+D T+ PDNPD+LQNQE LLPGHL+T+ +KEKL+EWL K
Sbjct: 333  LDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLPGHLITLYLKEKLEEWLQK 392

Query: 522  VKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXX 343
             K +L  EI      F+   +A VKK +EK +T G+  ++ENM+ TG L           
Sbjct: 393  GKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIENMLKTGRLVTTTGLDLHQR 452

Query: 342  XGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGL 163
             G TV AER+NF RF+SHFR++HRGS F  +RTTTVRKLLPESWGFLCPVHTPDG PCGL
Sbjct: 453  AGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGL 512

Query: 162  LNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LNH+T  C++T+  D+EG++KD  KI+ ++  +L+++GM  SLP++   GPPE
Sbjct: 513  LNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQSLPKIFLPGPPE 565


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  559 bits (1441), Expect = e-156
 Identities = 267/481 (55%), Positives = 358/481 (74%)
 Frame = -1

Query: 1446 LMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLV 1267
            L P+ECRQA ISY G+   DVCFQ+ +GV IRE+   G+ PIML+S LCHL+   P +LV
Sbjct: 49   LYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHLRGADPQKLV 108

Query: 1266 GLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRT 1087
              +EE +E+GGYFI NG ER++RLLI PKRN+P+++ RN++R+R   YTDKAVV+RC R 
Sbjct: 109  SCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDKAVVIRCVRE 168

Query: 1086 DQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQ 907
            DQS+VT +LYYL++GSA +GF ++ REYL+PVGV+LKALID TD EI++ L    +   +
Sbjct: 169  DQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKYE 228

Query: 906  GQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEAL 727
            G KG VGT+ V +R  IILDEV+  +++T+ + L+ IGE F+ V++G+E +S   V +A+
Sbjct: 229  GGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADAV 288

Query: 726  IKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKE 547
            ++EYI VHLD+  DKFN LIFM+QKLF+L+D T+ PDNPD LQNQE LLPGHL+TI +KE
Sbjct: 289  LREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKE 348

Query: 546  KLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXX 367
            KLQEWL+K + +L  EIN  ++ F+   +A VKK M+K  +  +  +VENM+ TG L   
Sbjct: 349  KLQEWLYKARRLLQDEIN-KRKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQ 407

Query: 366  XXXXXXXXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHT 187
                     GMTV AERLNF RFLSHFR++HRG+ F  +RTT+VRKLLPE+WGFLCPVHT
Sbjct: 408  SGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHT 467

Query: 186  PDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPP 7
            PDG PCGLLNH+   C+IT+  D+ G+ +D  KIR ++ +VLI +GM P+LP++ Q GPP
Sbjct: 468  PDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPP 527

Query: 6    E 4
            E
Sbjct: 528  E 528


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score =  545 bits (1405), Expect = e-152
 Identities = 269/535 (50%), Positives = 379/535 (70%), Gaps = 4/535 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSG--NKLRMWLERPCIFSPDKENAEGR-HEQRLMPYECR 1426
            Y   +GLD     ++ V +      N+L +WLE P +F+P KE+ +    ++ L+P+ECR
Sbjct: 32   YMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQKESFKSTSRKEPLLPFECR 91

Query: 1425 QAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPT 1246
            QA ISY G F  DVCF++NDGVV+R++  FG+ PIML S LC LK     +L+  +E  +
Sbjct: 92   QAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSKLCSLKGADCRKLLKCKESTS 151

Query: 1245 EVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTA 1066
            E+GGYFI NG ER+ R +IAPKRNHP ++ RN++R+R   Y+ KAVV RC R DQSSVT 
Sbjct: 152  EMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTV 211

Query: 1065 RLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQ-KGVV 889
            +LYYL++GSA +GF +  REYL+PVG++LKAL +  D EI++ L + C S   G+  G +
Sbjct: 212  KLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESL-NCCYSEHYGRGDGAI 270

Query: 888  GTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYIL 709
            GT+ V +RA IILDEV+   ++T+ +  K +G+ F+ VL+G++++S   V EA++++Y+ 
Sbjct: 271  GTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLSIVAEAVLRDYLF 330

Query: 708  VHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWL 529
            VHLD+  DKFN LIF++QKL++LVD T+ PDNPD+LQNQE L+PGH++TI +KEKL+EWL
Sbjct: 331  VHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVPGHVITIYLKEKLEEWL 390

Query: 528  FKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXX 349
             K KS+L  E+++   KF  + +A VKK + K     +G S+E ++ TG L         
Sbjct: 391  RKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTSIETLLKTGALKTQSGLDLQ 450

Query: 348  XXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPC 169
               G TV AERLNF RFLS FR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDGTPC
Sbjct: 451  QRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGTPC 510

Query: 168  GLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            GLLNH+T   +IT+  D++G+++D +KIRK++  VL   GM+PSLP++ + GPP+
Sbjct: 511  GLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGMVPSLPKLVRAGPPK 565


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score =  542 bits (1397), Expect = e-151
 Identities = 266/535 (49%), Positives = 370/535 (69%), Gaps = 4/535 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGN--KLRMWLERPCIFSPDKENAEGR-HEQRLMPYECR 1426
            Y  E+GL      ++ V + +     KL +WLE P ++SP KE+      ++ L P+ECR
Sbjct: 33   YMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSPQKESLRSTSRKEALFPFECR 92

Query: 1425 QAGISYKGRFYLDVCFQWN-DGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEP 1249
            QA ISY G    ++CF+++ D  V+R++ +FG  PIML S LCHL+     QL+  +E  
Sbjct: 93   QAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMSKLCHLRGADCRQLLKYKEST 152

Query: 1248 TEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVT 1069
            +E+GGYFI NG ER+ R +IAPKRNHP  + RN++  R   Y+DKAV +RC R DQSSVT
Sbjct: 153  SEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRREGYSDKAVAIRCVRDDQSSVT 212

Query: 1068 ARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVV 889
             +LYYL++GSA +GF +  REYL+PVGV+LKAL +  D EI++ L    N       G +
Sbjct: 213  VKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEEIYENLTCCYNERYGRGDGAI 272

Query: 888  GTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYIL 709
            GT+ + +R+ IILDEV+   ++T+ +  K++GERF+  L+G+E++S   V EA++K YI 
Sbjct: 273  GTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLEKESYPTVAEAVLKNYIF 332

Query: 708  VHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWL 529
            VHLD+  DKFN LIF++QKLF+LVD T+ PDNPD+LQNQE L+PGHL+TI +KEKL+EWL
Sbjct: 333  VHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILVPGHLITIYLKEKLEEWL 392

Query: 528  FKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXX 349
             K KS+++ E N  K KF  + +A VKK + K     +G S+E ++ +G L         
Sbjct: 393  RKCKSLIEDEFNRSK-KFSFETIADVKKIINKNPPRSIGMSIETLLKSGRLNTQSGLDLQ 451

Query: 348  XXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPC 169
               G TV AERLNF RFLS FR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDG PC
Sbjct: 452  QRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPC 511

Query: 168  GLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            GLLNH+T  C+IT+  D+ G+++D +KIRK++  VL+ +GM+PSLP++ + GPP+
Sbjct: 512  GLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGMVPSLPKLVRAGPPK 566


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  540 bits (1391), Expect = e-151
 Identities = 265/542 (48%), Positives = 377/542 (69%), Gaps = 11/542 (2%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGNK---------LRMWLERPCIFSPDKENAEGR-HEQR 1447
            Y  ++GLD     ++ V +     +         + +WLE P +F+P KE+      ++ 
Sbjct: 32   YMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENPVVFAPQKESFRSTSRKEP 91

Query: 1446 LMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLV 1267
            L+P+ECRQA ISY G F  DVCF++NDGVV+R++  FG+ PIML S LC L+     +L+
Sbjct: 92   LLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFDFGQFPIMLMSKLCSLRGADCRKLL 151

Query: 1266 GLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRT 1087
              +E  +E+GGYFI NG ER+ R +IAPKRNHP ++ RN++R+R   YT+KAVV RC R 
Sbjct: 152  KCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYTEKAVVTRCVRD 211

Query: 1086 DQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQ 907
            DQSSVT +LYYL++GSA +GF +  REYL+PVG++LKAL +  D EI++ L + C S   
Sbjct: 212  DQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNTCDEEIYESL-NCCYSEHY 270

Query: 906  GQ-KGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEA 730
            G+  G +GT+ + +RA IILDEV+   ++T+ +  K +G+ F+ VL+G+E++S   V EA
Sbjct: 271  GRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGLEKESHPMVAEA 330

Query: 729  LIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIK 550
            ++++Y+ VHLD+  DKFN LIF++QKL++LVD T+ PDNPD+LQNQE L+PGH++TI +K
Sbjct: 331  VLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVPGHVITIYLK 390

Query: 549  EKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTX 370
            EKL++WL K KS+L  E+ +   KF  + +A VKK + K     +G S+E ++ TG L  
Sbjct: 391  EKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNPPRSIGTSIETLLKTGALKT 450

Query: 369  XXXXXXXXXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVH 190
                      G TV AERLNF RFLS FR++HRG+ F  +RTTTVRKLLPESWGFLCPVH
Sbjct: 451  QSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVH 510

Query: 189  TPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGP 10
            TPDGTPCGLLNH+T   +IT+  D++G+++D +KIRK++  VL   GM+ SLP++ + GP
Sbjct: 511  TPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVEVLTGAGMVSSLPKLVRAGP 570

Query: 9    PE 4
            P+
Sbjct: 571  PK 572


>ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
            gi|557093304|gb|ESQ33886.1| hypothetical protein
            EUTSA_v10006600mg [Eutrema salsugineum]
          Length = 1181

 Score =  534 bits (1376), Expect = e-149
 Identities = 259/534 (48%), Positives = 370/534 (69%), Gaps = 3/534 (0%)
 Frame = -1

Query: 1596 YFLERGLDSAVLNLRSVEIRQSGNKLRMWLERPCIFSPDKENAEGRHEQR-LMPYECRQA 1420
            Y  E+GL      ++ V +  SGNKL +WL+ P ++ P KE+      Q  L P+ECRQA
Sbjct: 31   YMTEKGLAVMFNRIKPVSVYDSGNKLSIWLDNPVVYPPQKESPSSTSRQEALFPFECRQA 90

Query: 1419 GISYKGRFYLDVCFQWNDGV-VIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
             ISY G+   +VC Q+ND   VIR++  FG +PIML S LC+L+     +L+  +E  +E
Sbjct: 91   KISYTGKLMAEVCLQYNDEPPVIRDKFDFGELPIMLMSKLCNLRGADCRKLLKYKEATSE 150

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFI  G E++ R +IAPKRNHP+ + RN++ +R   ++DKAV +RC R DQSSVT +
Sbjct: 151  MGGYFILKGIEKVFRCVIAPKRNHPMGMVRNSFIHRQEGFSDKAVSIRCVRDDQSSVTIK 210

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGT 883
            LYY+++GSA +GF L  +EYL+PVG++LKAL +  D EI++ L    N   +   G +GT
Sbjct: 211  LYYVRNGSARVGFWLGGKEYLLPVGIVLKALTETNDEEIYENLNCCYNERFERCDGAIGT 270

Query: 882  EFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVH 703
            + V +R+ IILDEV+   ++T+ +  K++GERF+  L+G+E++S   V +A++K YI VH
Sbjct: 271  QLVRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLEKESYPTVADAVLKNYIFVH 330

Query: 702  LDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFK 523
            LD+  DKFN LIF++QKLF+LVD T+ PDNPD+LQNQE L+PGHL+TI +KEKL+ WL K
Sbjct: 331  LDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILVPGHLITIYLKEKLEVWLRK 390

Query: 522  VKSVLDKEINDDK-QKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXX 346
             KS++++E  ++K +K+  +  A VKK M +  +  +G S+   +  G +          
Sbjct: 391  CKSIIEQEFGNNKSKKYSFESHADVKKLMNRNPSSSIGTSIGTFLTRGEIHTQYGLDFPE 450

Query: 345  XXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCG 166
              G TV AERLNF RFLS FR++HRG+ F  +RTTTVRKLLPESWGFLCPVHTPDGTPCG
Sbjct: 451  SKGFTVQAERLNFIRFLSFFRAVHRGASFADLRTTTVRKLLPESWGFLCPVHTPDGTPCG 510

Query: 165  LLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LLNH+T  C+IT+  D+ G+++D  KIRK++  VL+ +GM+ SLP++ + GPP+
Sbjct: 511  LLNHMTRTCRITSQFDSNGNIRDFQKIRKSVVDVLVGVGMVCSLPKLVRAGPPK 564


>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA polymerase
            I subunit RPA2-like [Setaria italica]
          Length = 1172

 Score =  532 bits (1370), Expect = e-148
 Identities = 281/534 (52%), Positives = 374/534 (70%), Gaps = 4/534 (0%)
 Frame = -1

Query: 1593 FLERGLDSAVLNLRSVEIRQSGNK--LRMWLERPCIFSPDKENAEGRHEQRLMPYECRQA 1420
            FL+ GLD  +  +R +EI+   +   L++ LE+  +  P ++   GR    L P ECRQA
Sbjct: 32   FLDVGLDEMLRGIRPMEIKDPNSSAILKITLEKGQVLPPMRD---GRLGVPLYPQECRQA 88

Query: 1419 GISYKGRFYLDVCFQWN-DGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTE 1243
              +Y G F +DVC Q N DG  IR    FG +PIML S LCHL+D  PH+LV   EE TE
Sbjct: 89   RTTYHGEFKVDVCLQCNEDGAQIRHTFNFGHLPIMLMSKLCHLRDADPHKLVFHGEEATE 148

Query: 1242 VGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTAR 1063
            +GGYFIC G ERLIR+LI  KRN+P+ + R ++  RG  YTDKAVV+RC  +DQSSVT +
Sbjct: 149  MGGYFICGGMERLIRILILQKRNYPMGLVRGSFVKRGAGYTDKAVVIRCVHSDQSSVTIK 208

Query: 1062 LYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQ-KGVVG 886
            LYYLQ+GSA +GF L  RE+L+PVG++LKALID +D EIF  L + C S   G+ KGVV 
Sbjct: 209  LYYLQNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSL-TCCYSDKYGRGKGVVS 267

Query: 885  TEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILV 706
            T+ + +RA IILDEV+  ++ T+ + L  IG+ F++V+EG E      V +A++K+YI V
Sbjct: 268  TQLIGERAQIILDEVRDLSLLTRMQCLVHIGKYFRSVMEGFEHYDYETVAKAVLKDYIFV 327

Query: 705  HLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLF 526
            HL++  DKFN LIFMLQKL+ALVD TA+PDN D LQ QEALLPGHL+TI +K++LQ+WL 
Sbjct: 328  HLENNHDKFNLLIFMLQKLYALVDQTASPDNADALQFQEALLPGHLITIFLKDRLQDWLR 387

Query: 525  KVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXX 346
            K K ++ +E   +K  FDL +   V+K + K +T  VGR++E+MI  G +          
Sbjct: 388  KSKRLIIEEATKNK-SFDLNNALEVRKFLTK-HTTFVGRAIESMIKIGKVNSQSGLDLPQ 445

Query: 345  XXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCG 166
              GMT+ AERLNF R++SHFRS+HRGS F +MRTT+VRKLLPESWGFLCPVHTPDG PCG
Sbjct: 446  RDGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCG 505

Query: 165  LLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPE 4
            LLNH+T  C+I++  ++EG VKD  KI+K+L+  L+ +GM P LP++ + GPPE
Sbjct: 506  LLNHMTSTCRISSVYNSEGVVKDFGKIKKSLSFELVRVGMNPVLPKIERTGPPE 559


>gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlisea aurea]
          Length = 1144

 Score =  531 bits (1368), Expect = e-148
 Identities = 256/491 (52%), Positives = 352/491 (71%), Gaps = 7/491 (1%)
 Frame = -1

Query: 1452 QRLMPYECRQAGISYKGRFYLDVCFQWNDG------VVIREQCQFGRIPIMLRSSLCHLK 1291
            +++ P ECRQA +SY G+F LDV FQ++DG        IRE   FG+ PIML+S LCHL+
Sbjct: 40   EKIQPVECRQAKLSYSGKFTLDVIFQYDDGGSNQNHFSIRENMSFGQFPIMLKSKLCHLR 99

Query: 1290 DLGPHQ-LVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDK 1114
            D    + LV L EE +E+GGYFI NG ER++RL+I  K+N+P+++ER+++R R   YT+K
Sbjct: 100  DADDSKKLVALNEESSEMGGYFILNGLERVVRLVILQKQNYPMSMERSSFRERREGYTEK 159

Query: 1113 AVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQL 934
            AV +RC R D SSVT RLYY+++GSA +GF ++ RE L+P+G++LKAL++ TD  I+ +L
Sbjct: 160  AVAIRCVREDYSSVTVRLYYIENGSARVGFWIQGREILLPIGIVLKALVETTDKNIYWRL 219

Query: 933  ASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERK 754
                N  +   +G VGT+ + +R  +ILDE+   +++T+ + L+ IGERF+  + G+E +
Sbjct: 220  TCCYNENNDQVRGAVGTQLIGERVQVILDEIHNLSLHTRAQCLQHIGERFRPWMIGLENE 279

Query: 753  SDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPG 574
            SD  V +A++K +ILVHLD   DKFN LIFML KLF+LVD T+ PDNPD LQNQE LLPG
Sbjct: 280  SDYVVADAVLKNFILVHLDDHKDKFNLLIFMLWKLFSLVDHTSIPDNPDALQNQEVLLPG 339

Query: 573  HLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENM 394
            HL+T+ +KEKLQEWL + K  L  E ++  +KFDL  +  V+K +EK     +G+++E +
Sbjct: 340  HLITVYLKEKLQEWLLRSKRALQDEADNKAKKFDLSSLVNVRKVLEKNSPRQIGQAIEML 399

Query: 393  INTGNLTXXXXXXXXXXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPES 214
            + TG L            GMTV+AERLNF RF+SHFR++HRG+ F  +RTT+VRKLLPES
Sbjct: 400  LKTGALKTKSSLDLPQRAGMTVLAERLNFLRFVSHFRAVHRGASFAGLRTTSVRKLLPES 459

Query: 213  WGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSL 34
            WGFLCPVHTPDG PCGLLNH+TV+C+IT+  D+EG VKD +KIRK++  VL+  GM PS 
Sbjct: 460  WGFLCPVHTPDGEPCGLLNHMTVSCRITSHYDSEGKVKDFLKIRKSVLEVLVSSGMEPSE 519

Query: 33   PRVSQVGPPEY 1
            P+    GPPEY
Sbjct: 520  PKTVLAGPPEY 530


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  530 bits (1364), Expect = e-148
 Identities = 265/497 (53%), Positives = 358/497 (72%), Gaps = 6/497 (1%)
 Frame = -1

Query: 1476 ENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCH 1297
            E++  +H+ RL+P+ECRQA ISY G+F  DVCF+++   VIRE+  FG++PIML+S LCH
Sbjct: 50   ESSRTKHK-RLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCH 108

Query: 1296 LKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTD 1117
            L  +   QLV   EE  E+GGYFI NG ER++RLLI PKRN+P++  R ++R+R   YTD
Sbjct: 109  LYGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTD 168

Query: 1116 KAVVVRCTR------TDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTD 955
            KAVV+RC R      TDQSSV+ +LYYL+ GSA +GF ++ REYL+P G++LKAL + TD
Sbjct: 169  KAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTD 228

Query: 954  AEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTV 775
             EI+++L    +   +  KG VG++ V +RA IILDEV+  +++TQ E L+ IGE F+ V
Sbjct: 229  REIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPV 288

Query: 774  LEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQN 595
            ++G+E+++   V  A++K+YI VHL+++ DKFN LIFMLQKLF+LVD T+  DNPD+LQN
Sbjct: 289  MDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQN 348

Query: 594  QEALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGV 415
            QE LLPGHL+TI +KEKL+EWL K K VL +EI  +   F+   +  VKK ++K  +  +
Sbjct: 349  QEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKN-NNFNFLSVLDVKKVIDKNPSTTI 407

Query: 414  GRSVENMINTGNLTXXXXXXXXXXXGMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTV 235
              +VENM+ TG L            G TV AERLNF RFLS FR++HRG+ F  +RTT+V
Sbjct: 408  SLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSV 467

Query: 234  RKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLID 55
            RKLLPESWGFLCPVHTPDG PCGLLNH+T +C+IT+  D++G VKD   IRK++  VL  
Sbjct: 468  RKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTS 527

Query: 54   LGMIPSLPRVSQVGPPE 4
            LGM  SLP++ Q GPP+
Sbjct: 528  LGMTSSLPKLVQAGPPQ 544