BLASTX nr result

ID: Ephedra28_contig00009425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009425
         (3221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856035.1| hypothetical protein AMTR_s00059p00072490 [A...   289   e-100
gb|EMJ00896.1| hypothetical protein PRUPE_ppa000770mg [Prunus pe...   238   5e-95
ref|XP_004981947.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   240   2e-90
gb|EEE59828.1| hypothetical protein OsJ_12391 [Oryza sativa Japo...   249   3e-90
gb|EEC76090.1| hypothetical protein OsI_13331 [Oryza sativa Indi...   249   3e-90
ref|XP_004981948.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   238   7e-90
ref|XP_004981949.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   237   1e-89
ref|XP_004981946.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   234   1e-88
emb|CAE01777.2| OSJNBa0027H06.15 [Oryza sativa Japonica Group] g...   229   4e-85
emb|CAH67781.1| H0201G08.8 [Oryza sativa Indica Group] gi|218194...   226   2e-84
ref|XP_004965897.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   219   3e-81
ref|XP_006650513.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   253   6e-81
ref|XP_002446041.1| hypothetical protein SORBIDRAFT_06g000850 [S...   216   2e-79
ref|XP_002313800.1| DNA-binding family protein [Populus trichoca...   300   2e-78
ref|XP_002305423.1| DNA-binding family protein [Populus trichoca...   286   4e-74
ref|XP_004299098.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   286   5e-74
ref|XP_002509474.1| Transcription regulatory protein SWI3, putat...   277   2e-71
gb|EXB63581.1| SWI/SNF complex subunit SWI3D [Morus notabilis]        273   5e-70
ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   267   2e-68
ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   265   1e-67

>ref|XP_006856035.1| hypothetical protein AMTR_s00059p00072490 [Amborella trichopoda]
            gi|548859894|gb|ERN17502.1| hypothetical protein
            AMTR_s00059p00072490 [Amborella trichopoda]
          Length = 864

 Score =  289 bits (740), Expect(2) = e-100
 Identities = 238/772 (30%), Positives = 353/772 (45%), Gaps = 122/772 (15%)
 Frame = -3

Query: 2355 DTSSTLLENLYSFKKIDNRHLSK---PSKIXXXXXXXXXXXAEPAMSETLMGPQGPAVEY 2185
            D  +  LE LY F+K+ +R + K      +            + ++ +    P+GPAVEY
Sbjct: 108  DKMAFSLEKLYQFEKVQSRSVPKVVTKGGLSAPAVPPPNMLTDSSIPDVSARPEGPAVEY 167

Query: 2184 HCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPV--RIGVNGASW 2011
            HCN CSADCS KRYHCQKQADFDLC++CYN  +FG+GM   DF+LMEP     GV+G SW
Sbjct: 168  HCNSCSADCSRKRYHCQKQADFDLCSECYNDGKFGSGMAPADFILMEPATEMPGVSGGSW 227

Query: 2010 TDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFEDNAVPDVTAQ- 1834
            T+Q          LYG NWNEIAEHVATK+K+QCILHFI++P+EDPF E     D++ Q 
Sbjct: 228  TNQETLLLLEALELYGENWNEIAEHVATKTKSQCILHFIQMPVEDPFLEGKEPTDMSIQG 287

Query: 1833 ----SNLEENTSKXXXXXXXXXXXXXPVTVSCSTE-EQTAAAMDMIDKEKNENGSEDGPQ 1669
                 +   + S                  S STE  +    +D+++  K   G+     
Sbjct: 288  APDTGSTSIDVSLPEAAPPVKGTDSEEAPESLSTEPTKPKEEIDVVEPAKESVGN----- 342

Query: 1668 VFEXXXXXXXXXAFHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSAL 1489
                        AF A  +L+    S+S  EAGNPVM L AFLA +VDP VA+ S++S++
Sbjct: 343  ----FVLDALKRAFEAVRALSRPGGSLSFGEAGNPVMALVAFLAAMVDPEVATDSTRSSM 398

Query: 1488 RILCEKKSSLDIASKHCFQLE-------DPPA---------------EEN-------GLT 1396
            + + E    + +A +H F LE       DPPA               EEN       G  
Sbjct: 399  KAILEDSPGIQLAMRHSFLLEDSPEDVKDPPASQSTTPDTVDVEVQKEENHSSTVKEGEA 458

Query: 1395 KRTDT-------DKMEEIPLLQV----------EVSEQPM-PSETDNSILPVVPKSPVRM 1270
            K+ DT       D  + +P  ++          E  E P+ P E++++I P  P S  + 
Sbjct: 459  KKNDTVNSVSLKDNKDPLPNNELGQAVSPSSLKERKEDPVPPKESEDTITP--PMSMEKS 516

Query: 1269 ETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDK--------------- 1135
            + V   +   +    + SKENT   D    E + KA  +E+  +K               
Sbjct: 517  DNVIPAKESGETTMPSSSKENT-EKDPSIKENMEKASPVEENTEKAAPPIKENTAKASPM 575

Query: 1134 ---QDLISSGKLVEGNDKKEDLDKVVDSNP----------TEQAKVQE---ENKPSDVSV 1003
                + +SS  L +  +K    + + ++NP           ++AK  E   E+ PS+  V
Sbjct: 576  REPSETVSSSSLPDNMEKPSTSNGLDEANPLKTLSEATAGLDRAKAVEKMAESVPSEAQV 635

Query: 1002 --EGVNSDM--NKKTDDGKE-LLEKQAEIEDSCKLE------------------------ 910
              + V SD     K + G+E   E+   +E++CK E                        
Sbjct: 636  PQQRVVSDSAPEAKENTGEENARERNKTVENNCKPESDAAKETSNIDNRKPNASVESKDG 695

Query: 909  ----KLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESA 742
                +LK AA++ LS+ +VKAK+LA QEEE IQ+L   +I+ QL+KLE KM  L ++E A
Sbjct: 696  HKEDRLKHAALSALSATAVKAKLLAKQEEETIQQLVLSVIEKQLQKLEVKMGPLFEMERA 755

Query: 741  YSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSFMGGVSR 562
              +                   I +R G P    R+ ++++  +    +P  + +     
Sbjct: 756  NMRIREPIDKARQRLYHERAQIIAARFGYPPPTSRAAALSSNPTGKTPLPNSNTVSS--- 812

Query: 561  PYKPGTTKPPMFPSPMHSFRRVTSTDNNTPQTSTANISSSGLPNSTVPQLES 406
              +P    PP    P+     + S+     ++S   +S  GLP ST P L S
Sbjct: 813  --QPPIANPPRPTKPLVPASSLLSSATGHARSSHV-MSQDGLP-STRPNLPS 860



 Score =  105 bits (262), Expect(2) = e-100
 Identities = 45/82 (54%), Positives = 61/82 (74%)
 Frame = -2

Query: 2647 WFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLISLSDVSDIVS 2468
            WFSW K+H LEE++L SFFNGK E RNP++Y+ +RN+I+K+FH  P   +++ D+SD  S
Sbjct: 9    WFSWTKVHPLEERALVSFFNGKSEKRNPDLYMHVRNSIIKKFHNDPQTQLTVEDLSD-QS 67

Query: 2467 AESSDAVQRILEFLDHWGLINF 2402
                DAV  ++ FLDHWGLINF
Sbjct: 68   IGDFDAVHEVMAFLDHWGLINF 89


>gb|EMJ00896.1| hypothetical protein PRUPE_ppa000770mg [Prunus persica]
          Length = 1009

 Score =  238 bits (607), Expect(2) = 5e-95
 Identities = 165/496 (33%), Positives = 237/496 (47%), Gaps = 37/496 (7%)
 Frame = -3

Query: 2343 TLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSA 2164
            +L++ LY F+ + +R    P               E A++E L+ P+GPAVEYHCN CSA
Sbjct: 249  SLVDKLYHFEALQSRSSVVPKTNITTPTVPSGLFPESAIAEELVRPEGPAVEYHCNSCSA 308

Query: 2163 DCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI-GVNGASWTDQXXXXX 1987
            DCS KRYHCQKQADFDLCTDC++  +F +GM S+DF+LMEP    GV+G  WTDQ     
Sbjct: 309  DCSRKRYHCQKQADFDLCTDCFSNGKFDSGMSSSDFILMEPAEAPGVSGGKWTDQETLLL 368

Query: 1986 XXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE----------DNAVPDVTA 1837
                 LY  NWNEIAEHVATK+KAQCILHF+++PIED F +          + A P  T 
Sbjct: 369  LEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYEDDIDASAKETADPTSTD 428

Query: 1836 QSNL---------EENTSKXXXXXXXXXXXXXPVTVSCSTEEQTAAAMDMIDKEKNENGS 1684
              +L         E  T                     +  + T+   D+ + +  E  S
Sbjct: 429  NESLAPKDAPETTENKTGASESDPQTSPVETSKEVTEVNVGQDTSKPEDVNEVKVGEETS 488

Query: 1683 --ED------GPQVFEXXXXXXXXXAFHAFGSLADSETSISLSEAGNPVMVLAAFLAGIV 1528
              ED        +  E         AF   G    SE  +S +E GNP M LAAFLA +V
Sbjct: 489  KLEDTGELKVDQETDESFALNALKEAFEVVGYPPTSEGQLSFAEVGNPAMALAAFLARLV 548

Query: 1527 DPLVASCSSKSALRILCEKKSSLDIASKHCFQLEDPPAEENGLTKRTDTDKMEEIPLLQV 1348
             P VA  S+ ++L+ +       ++A++HCF LEDPP++                     
Sbjct: 549  GPDVAIASAHNSLKSISASSPGTELAARHCFLLEDPPSDN-------------------- 588

Query: 1347 EVSEQPMPSETDNSILPVVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVG 1168
               EQ  P    +S++  V K  V+ E +  E+   K ++ T   E+    + K    + 
Sbjct: 589  --KEQAGP----DSVVAEVLKDKVQ-EDIVDEDKSQKEDNATSGLEDKDLSNDKGDNILE 641

Query: 1167 KAKHLE--DGPDKQDLISSGKLVEGN--DKKEDLDKVVDSNPT-----EQAKVQEENKPS 1015
            K    E     ++QD I S + VE +  +K ++L+   D +PT     + +K++ EN PS
Sbjct: 642  KPSPEEKSQSAEEQDGIVSHEEVEADNLNKSDNLELPKDQSPTTVGKLDDSKLEAENPPS 701

Query: 1014 DVSVEGVNSDMNKKTD 967
                 G    + K ++
Sbjct: 702  SEKESGEGISVGKPSE 717



 Score =  140 bits (352), Expect(2) = 5e-95
 Identities = 91/219 (41%), Positives = 118/219 (53%), Gaps = 13/219 (5%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRKNTN----PSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXX 2858
            SS +RRGG+ KRK ++     SS+ PSKR  RE+  L+H PP+  +N P+          
Sbjct: 25   SSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAMLSH-PPI--HNGPLTRARQGPSSL 81

Query: 2857 XXXXXXXXXXXXXXXXXSLLPPPKPTL-----PVEAPVKEPSKPVQSLASVLASWELGDE 2693
                                   KPT+     PV   V E  K    L ++ AS E   E
Sbjct: 82   GSASASGAAV-------------KPTVAKRPDPVGEAVAELVKRESELEALEASMEAEFE 128

Query: 2692 ILADQNA--HIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFH 2519
             +  +NA  H+VP+  GWFSW K+H +EE+ LPSFFNGK ETR P+ YLEIRN IMK FH
Sbjct: 129  AIRSRNANAHVVPSHCGWFSWTKVHPIEEQMLPSFFNGKSETRTPDAYLEIRNCIMKIFH 188

Query: 2518 TSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
             +P   I L D+ ++      DA Q ++EFLDHWGLINF
Sbjct: 189  ANPGVFIELKDLLEL-EVGDFDARQEVMEFLDHWGLINF 226



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 91/308 (29%), Positives = 136/308 (44%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1434 QLEDPPAEENGLTKRTDTDKMEEIPLLQVEVSE-QPMPSETDNSILPVVPKSPVRMETVS 1258
            + E+PP+ E    +     K  E      +V     +PS  D    PV   S V     S
Sbjct: 695  EAENPPSSEKESGEGISVGKPSEPTDTPKDVDMCDSLPSTKDKPQQPVTSNS-VEEPPRS 753

Query: 1257 TEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDKQDLISSGKLVEGNDKKEDL 1078
            TE +K    DL VS  N+    + E +    AK  E+ P               ++ +D+
Sbjct: 754  TEASK----DLDVS--NSLASQMNEPQQPVTAKS-EEPP------------RPTEESKDV 794

Query: 1077 DKVVDSNPTEQAKVQEENKPSDVSVEGVNSDMNKKTDDGKELLEKQAEIEDSCKLEKLKR 898
            D V D  P EQ   Q+    + +   G + D   +T+DGK       E +   K++KLK 
Sbjct: 795  DMVSDPQPQEQDDSQQPVASNSMVETGASED---QTNDGKSEKHDTIETKVDQKIDKLKH 851

Query: 897  AAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESAYSKQXXXX 718
            AAV+ +S+A+VKAK+LA QEE+ I++LAA +I+ QL KLE K+    ++E+   +     
Sbjct: 852  AAVSTISAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFSEMENVVMRVREQL 911

Query: 717  XXXXXXXXXXXXXTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSFMGGVSRPYKPGTTK 538
                          I +RLG    LP S+S    +S+PA     +    V RP    T+ 
Sbjct: 912  DRSRQKLYHERAQIIAARLG----LPGSSSRPMPSSMPANRMAMNVANSVPRPPLNMTSL 967

Query: 537  PPMFPSPM 514
             P    PM
Sbjct: 968  RPPMSRPM 975


>ref|XP_004981947.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X2 [Setaria
            italica]
          Length = 915

 Score =  240 bits (612), Expect(2) = 2e-90
 Identities = 187/628 (29%), Positives = 299/628 (47%), Gaps = 80/628 (12%)
 Frame = -3

Query: 2391 ELNEAVEKKENA--DTSSTLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSE 2221
            E ++  E ++N+  +  ++L+E L+ F+ + +  +  P K              +P + E
Sbjct: 229  EESKPEESQDNSHDEDKASLIEQLFKFEPVQSYIMPLPKKEDVGAPPPLPSLFPDPVLLE 288

Query: 2220 TLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEP 2041
             ++    P+VEYHCN CS DCS KRYHC+ QADFDLC DCYN  +F  GM  TDF+LM+ 
Sbjct: 289  DVVAAAEPSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDS 348

Query: 2040 VRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE 1864
              + G +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F +
Sbjct: 349  SEVSGASGTSWTDEETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHD 408

Query: 1863 DNAV----PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT-----------A 1729
               +    P  T Q+  E+  ++               TV     E+T           A
Sbjct: 409  GEDINQNTPGSTEQATTEKGIAETSEKMEVEDKEEGRDTVDEKVSEKTDGNCEETKPEGA 468

Query: 1728 AAMDMID--------------KEKNENGSEDGPQVFE-------------XXXXXXXXXA 1630
            +A++  D               E+ +  S++ P V E                      A
Sbjct: 469  SAVENKDTQNSGGKDSAASPNTEEPKQSSDEHPIVKENSGDVDTSGEKLSNVALDILKSA 528

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F A G     E   S + AGNPVM LAAFLAG+V+   A+ S +S+L+ + E   +L +A
Sbjct: 529  FEAAGH--SPEYQGSFAAAGNPVMALAAFLAGLVEDDNATTSCRSSLKAISEVSPALQLA 586

Query: 1449 SKHCFQLEDPPAE--------ENGLTKRTDTD--KMEEIPLLQVEVSEQPMPSETDNSIL 1300
            S+HCF LEDPP +         N   K TD D  K EE+    V+  ++    + DNS+ 
Sbjct: 587  SRHCFILEDPPNDLKDIYVSVSNKSNKSTDGDQTKDEEMTQNSVDTEKKENNEKEDNSL- 645

Query: 1299 PVVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKES--ETVGKAKHLED--GPDKQ 1132
                       +  +     +++D ++S+++    + K S  +  G +  + D    D  
Sbjct: 646  ----SMEKHNNSSISHNDHQESDDKSISRDDCPVVEPKTSNAKESGDSTAIVDKSATDNT 701

Query: 1131 DLISSGKLVEGNDKKEDLDK---VVDSNPTEQAKVQEE-NKPSDVSVEGVNSDMNKKT-- 970
             ++ +G  +  +D K+  DK    V++     +K ++E NK  D      N    K++  
Sbjct: 702  KVVVAGSNICASDPKQVKDKPSVEVEARDDSSSKGKDELNKTEDAVASPANVQEQKQSET 761

Query: 969  -DDGK----ELLEKQAEIED---------SCKLEKLKRAAVTVLSSASVKAKVLANQEEE 832
             ++GK      +E     E+         +  + +L+RAA T +S+A+VKAK L +QEE 
Sbjct: 762  LENGKMGEPNSIESVVANEEKGSGVTANQNDSITRLRRAAATAISAAAVKAKFLGDQEEY 821

Query: 831  CIQKLAADIIDNQLRKLEFKMRSLHQLE 748
             I++L A +I+   +K+E KM    ++E
Sbjct: 822  HIRRLTAMMIEKLFQKIEVKMSLFAEIE 849



 Score =  123 bits (308), Expect(2) = 2e-90
 Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXXXXXXXXX 2837
            +RRGG  KRK++  SS  PSKR A+ER    H+PP   ++ P+                 
Sbjct: 20   RRRGGGGKRKSSG-SSFTPSKRQAKERNAAFHVPPHLLHSGPLTRAARQSPHK------- 71

Query: 2836 XXXXXXXXXXSLLPPPKPTLPVEAP------VKEPSKPVQSLASVLASWELGDEILADQ- 2678
                       L   P  T P  +       V      V ++          ++ L D+ 
Sbjct: 72   -----------LSGTPPETGPASSAAAAGDGVSGGQGEVDAIRPEREETPAAEQPLVDEV 120

Query: 2677 ---------NAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKR 2525
                       H+VP  AGWFSWK+IH +E+++LPSFFNGK E R PE+YL IRN+IM +
Sbjct: 121  FEAVRSRGAGVHVVPTFAGWFSWKEIHLVEKQTLPSFFNGKSEKRTPEVYLAIRNSIMVK 180

Query: 2524 FHTSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            FH +P   +   D++++ + E +DA Q +LEFLDHWGLINF
Sbjct: 181  FHANPQLQLESKDLAELSTGE-ADARQEVLEFLDHWGLINF 220


>gb|EEE59828.1| hypothetical protein OsJ_12391 [Oryza sativa Japonica Group]
          Length = 940

 Score =  249 bits (636), Expect(2) = 3e-90
 Identities = 201/698 (28%), Positives = 306/698 (43%), Gaps = 117/698 (16%)
 Frame = -3

Query: 2382 EAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSK-IXXXXXXXXXXXAEPAMSETLMGP 2206
            E    K +++  +++LE L+ F+ + +  +  P K              +PA+ E ++  
Sbjct: 233  EEAHGKSHSEEKASVLEQLFKFESVQSYMIPLPKKGEVETPAPLPSLLPDPALIEDVVSA 292

Query: 2205 QGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI-G 2029
              P+VEYHCN CS DCS KRYHC+ QADFDLC+DCYN  +F  GM  TDF+LM+   + G
Sbjct: 293  AEPSVEYHCNSCSVDCSKKRYHCRTQADFDLCSDCYNEGKFNIGMAKTDFILMDSSEVSG 352

Query: 2028 VNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFEDNAV- 1852
             +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F  D  + 
Sbjct: 353  ASGTSWTDEETLLLLEALEIFGGKWTEIAEHVATKTKAQCMLHFLQMQIEDRFHGDEDIN 412

Query: 1851 ---PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEE---------QTAAAMDMID 1708
                + T Q++ E+  ++               T    T E         QT     + +
Sbjct: 413  QNIQENTEQASAEKGAAEIPDKMEVEEKAEGKDTAGEKTPEKAEGNSVEAQTEDGNAIEN 472

Query: 1707 KEKNENGSEDG-------------------------PQVFEXXXXXXXXXA--------- 1630
            K+ N +G  D                          P V E                   
Sbjct: 473  KDANNSGGTDSVKSLNTDEPKKSSDADPPKSSSDAEPVVKENSVDVDTSRENASNFAIDT 532

Query: 1629 ----FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSS 1462
                F A G   + E S +  +AGNPVM LA+FLAG+V+   A+ S +S+L+ + E   +
Sbjct: 533  LKSAFEAVGYFPEHEGSFA--DAGNPVMALASFLAGLVEDDTATNSCRSSLKAISEVSPA 590

Query: 1461 LDIASKHCFQLEDPPAE-----ENGLTKRTDTDKMEEIPLLQVEVSEQPMPSETDNSILP 1297
            L +A++HCF LEDPP++      N  T  TD DK ++               +T +SI  
Sbjct: 591  LQLATRHCFILEDPPSDVKDMSGNASTTSTDGDKRKD-------------KDKTQDSIDS 637

Query: 1296 VVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDKQDLISS 1117
             V     + ETV + E K K++ ++   ++T   D  + +     KH  +G +  D +S 
Sbjct: 638  EVEGINKKGETVLSVEGK-KSSPISPKGQDTDKKDECDEDPSVDPKH-NNGKESDDPVSL 695

Query: 1116 GKLVEGNDKKEDLDKVVDSNP--TEQAKVQEENKPSDVSVEGVNSDMNKKTDDGKELL-- 949
             K V  N K   ++    SNP   E     E N   D S+EG   +M K  D        
Sbjct: 696  DKSVSNNKKGNTME---TSNPEMIEDKASSEVNPADDSSLEG-KVEMKKTKDAVANATTA 751

Query: 948  --EKQAEIEDSCKLE--------------------------------------------- 910
              +KQ++I ++ K+E                                             
Sbjct: 752  QEQKQSQILENGKMEGNANTAKMVKTVNFNSGPLTYDTCPAEPKSTEDVAADEENSSRVT 811

Query: 909  --------KLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQ 754
                    +LKRAA T +S+A+VKAK+LA+ EEE +++LAA +ID   RK+E K+  L +
Sbjct: 812  ANLTDSITRLKRAAATAISAAAVKAKLLADHEEEQVRQLAALMIDKLYRKVEAKVSFLTE 871

Query: 753  LESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLP 640
            +E    +                   I +R+G+  + P
Sbjct: 872  VEHLVQRTREYTEKTRKKLLMERNAIIAARMGSLPSRP 909



 Score =  113 bits (282), Expect(2) = 3e-90
 Identities = 78/215 (36%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER---------LNHLPPLP--SNNTPIKXXXXXXX 2864
            +RRGG  KRK+   SS  PSKR A+ER         L H  PL   +  +P K       
Sbjct: 22   RRRGGGGKRKSGG-SSFTPSKRHAKERNAAFHVPPHLLHSGPLTRAARQSPHKLAEEAAA 80

Query: 2863 XXXXXXXXXXXXXXXXXXXSLLPPPKPTLPVEAP-VKEPSKPVQSLASVLASWELGDEIL 2687
                                +    +     E P V E  + V+S  +            
Sbjct: 81   AAAAGAGGSEAGGGKGGGDVIRLEGEEAPTEETPLVDEVFEAVRSRGA------------ 128

Query: 2686 ADQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPN 2507
                 H+VP  AGWFSWK+IH +E++ LPSFFNGK + R PE+YL IRN IM +FH +P 
Sbjct: 129  ---GVHVVPTFAGWFSWKEIHPIEKQMLPSFFNGKSDKRTPEIYLGIRNFIMLKFHANPQ 185

Query: 2506 KLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
              +   D++++ S   +DA Q +L+FLDHWGLINF
Sbjct: 186  LQLESKDLAEL-SIGEADAHQEVLKFLDHWGLINF 219


>gb|EEC76090.1| hypothetical protein OsI_13331 [Oryza sativa Indica Group]
          Length = 940

 Score =  249 bits (636), Expect(2) = 3e-90
 Identities = 202/698 (28%), Positives = 306/698 (43%), Gaps = 117/698 (16%)
 Frame = -3

Query: 2382 EAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSK-IXXXXXXXXXXXAEPAMSETLMGP 2206
            E    K +++  +++LE L+ F+ + +  +  P K              +PA+ E ++  
Sbjct: 233  EEAHGKSHSEEKASVLEQLFKFESVQSYMIPLPKKGEVETPAPLPSLLPDPALIEDVVSA 292

Query: 2205 QGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI-G 2029
              P+VEYHCN CS DCS KRYHC+ QADFDLC+DCYN  +F  GM  TDF+LM+   + G
Sbjct: 293  AEPSVEYHCNSCSVDCSKKRYHCRTQADFDLCSDCYNEGKFDIGMAKTDFILMDSSEVSG 352

Query: 2028 VNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFEDNAV- 1852
             +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F  D  + 
Sbjct: 353  ASGTSWTDEETLLLLEALEIFGGKWTEIAEHVATKTKAQCMLHFLQMQIEDRFHGDEDIN 412

Query: 1851 ---PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEE---------QTAAAMDMID 1708
                + T Q++ E+  ++               T    T E         QT     + +
Sbjct: 413  QNIQENTEQASAEKGAAEIPDKMEVEEKAEGKDTAGEKTPEKAEGNSVEAQTEDGNAIEN 472

Query: 1707 KEKNENGSEDG-------------------------PQVFEXXXXXXXXXA--------- 1630
            K+ N +G  D                          P V E                   
Sbjct: 473  KDANNSGGTDSVKSLNTDEPKKSSDADPPKSSSDAEPVVKENSVDVDTSRENASNFAIDT 532

Query: 1629 ----FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSS 1462
                F A G   + E S +  +AGNPVM LA+FLAG+V+   A+ S +S+L+ + E   +
Sbjct: 533  LKSAFEAVGYFPEHEGSFA--DAGNPVMALASFLAGLVEDDTATNSCRSSLKAISEVSPA 590

Query: 1461 LDIASKHCFQLEDPPAE-----ENGLTKRTDTDKMEEIPLLQVEVSEQPMPSETDNSILP 1297
            L +A++HCF LEDPP++      N  T  TD DK ++               +T +SI  
Sbjct: 591  LQLATRHCFILEDPPSDVKDMSGNASTTSTDGDKRKD-------------KDKTQDSIDS 637

Query: 1296 VVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDKQDLISS 1117
             V     + ETV + E K K++ ++   ++T   D  + +     KH  +G +  D +S 
Sbjct: 638  EVEGINKKGETVLSVEGK-KSSPISPKGQDTDKKDECDEDPSVDPKH-NNGKESDDPVSL 695

Query: 1116 GKLVEGNDKKEDLDKVVDSNP--TEQAKVQEENKPSDVSVEGVNSDMNKKTDDGKELL-- 949
             K V  N K   ++    SNP   E     E N   D S+EG   +M K  D        
Sbjct: 696  DKSVSNNKKGNTME---TSNPEMIEDKASSEVNPADDSSLEG-KVEMKKTKDAVANATTA 751

Query: 948  --EKQAEIEDSCKLE--------------------------------------------- 910
              +KQ++I ++ K+E                                             
Sbjct: 752  QEQKQSQILENGKMEGNANTAKMVKTVNFNSGPLTYDTCPAEPKSTEDVAADEENSSRVT 811

Query: 909  --------KLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQ 754
                    +LKRAA T +S+A+VKAK+LA+ EEE I++LAA +ID   RK+E K+  L +
Sbjct: 812  ANLTDSITRLKRAAATAISAAAVKAKLLADHEEEQIRQLAALMIDKLYRKVEAKVSFLTE 871

Query: 753  LESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLP 640
            +E    +                   I +R+G+  + P
Sbjct: 872  VEHLVQRTREYTEKTRKKLLMERNAIIAARMGSLPSRP 909



 Score =  113 bits (282), Expect(2) = 3e-90
 Identities = 78/215 (36%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER---------LNHLPPLP--SNNTPIKXXXXXXX 2864
            +RRGG  KRK+   SS  PSKR A+ER         L H  PL   +  +P K       
Sbjct: 22   RRRGGGGKRKSGG-SSFTPSKRHAKERNAAFHVPPHLLHSGPLTRAARQSPHKLAEEAAA 80

Query: 2863 XXXXXXXXXXXXXXXXXXXSLLPPPKPTLPVEAP-VKEPSKPVQSLASVLASWELGDEIL 2687
                                +    +     E P V E  + V+S  +            
Sbjct: 81   AAAAGTGGSEAGGGKGGGDVIRLEGEEAPTEETPLVDEVFEAVRSRGA------------ 128

Query: 2686 ADQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPN 2507
                 H+VP  AGWFSWK+IH +E++ LPSFFNGK + R PE+YL IRN IM +FH +P 
Sbjct: 129  ---GVHVVPTFAGWFSWKEIHPIEKQMLPSFFNGKSDKRTPEIYLGIRNFIMLKFHANPQ 185

Query: 2506 KLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
              +   D++++ S   +DA Q +L+FLDHWGLINF
Sbjct: 186  LQLESKDLAEL-SIGEADAHQEVLKFLDHWGLINF 219


>ref|XP_004981948.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X3 [Setaria
            italica]
          Length = 911

 Score =  238 bits (606), Expect(2) = 7e-90
 Identities = 187/621 (30%), Positives = 287/621 (46%), Gaps = 73/621 (11%)
 Frame = -3

Query: 2391 ELNEAVEKKENA--DTSSTLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSE 2221
            E ++  E ++N+  +  ++L+E L+ F+ + +  +  P K              +P + E
Sbjct: 229  EESKPEESQDNSHDEDKASLIEQLFKFEPVQSYIMPLPKKEDVGAPPPLPSLFPDPVLLE 288

Query: 2220 TLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEP 2041
             ++    P+VEYHCN CS DCS KRYHC+ QADFDLC DCYN  +F  GM  TDF+LM+ 
Sbjct: 289  DVVAAAEPSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDS 348

Query: 2040 VRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE 1864
              + G +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F +
Sbjct: 349  SEVSGASGTSWTDEETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHD 408

Query: 1863 DNAV----PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT-----------A 1729
               +    P  T Q+  E+  ++               TV     E+T           A
Sbjct: 409  GEDINQNTPGSTEQATTEKGIAETSEKMEVEDKEEGRDTVDEKVSEKTDGNCEETKPEGA 468

Query: 1728 AAMDMID--------------KEKNENGSEDGPQVFE-------------XXXXXXXXXA 1630
            +A++  D               E+ +  S++ P V E                      A
Sbjct: 469  SAVENKDTQNSGGKDSAASPNTEEPKQSSDEHPIVKENSGDVDTSGEKLSNVALDILKSA 528

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F A G     E   S + AGNPVM LAAFLAG+V+   A+ S +S+L+ + E   +L +A
Sbjct: 529  FEAAGH--SPEYQGSFAAAGNPVMALAAFLAGLVEDDNATTSCRSSLKAISEVSPALQLA 586

Query: 1449 SKHCFQLEDPPAE--------ENGLTKRTDTD--KMEEIPLLQVEVSEQPMPSETDNSIL 1300
            S+HCF LEDPP +         N   K TD D  K EE+    V+  ++    + DNS+ 
Sbjct: 587  SRHCFILEDPPNDLKDIYVSVSNKSNKSTDGDQTKDEEMTQNSVDTEKKENNEKEDNSLS 646

Query: 1299 PVV--PKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDKQDL 1126
                   S    +   +++  +  +D  V +  T         T    K   D     ++
Sbjct: 647  MEKHNNSSISHNDHQESDDKSISRDDCPVVEPKTSNAKESGDSTAIVDKSATDNTKGSNI 706

Query: 1125 ISSGKL---------VEGNDK-----KEDLDKVVDSNPTEQAKVQEENKPSDVSVEGVNS 988
             +S            VE  D      K++L+K  D+     A VQE+ K S+    G   
Sbjct: 707  CASDPKQVKDKPSVEVEARDDSSSKGKDELNKTEDA-VASPANVQEQ-KQSETLENGKMG 764

Query: 987  DMNK-KTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAA 811
            + N  ++    E          +  + +L+RAA T +S+A+VKAK L +QEE  I++L A
Sbjct: 765  EPNSIESVVANEEKGSGVTANQNDSITRLRRAAATAISAAAVKAKFLGDQEEYHIRRLTA 824

Query: 810  DIIDNQLRKLEFKMRSLHQLE 748
             +I+   +K+E KM    ++E
Sbjct: 825  MMIEKLFQKIEVKMSLFAEIE 845



 Score =  123 bits (308), Expect(2) = 7e-90
 Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXXXXXXXXX 2837
            +RRGG  KRK++  SS  PSKR A+ER    H+PP   ++ P+                 
Sbjct: 20   RRRGGGGKRKSSG-SSFTPSKRQAKERNAAFHVPPHLLHSGPLTRAARQSPHK------- 71

Query: 2836 XXXXXXXXXXSLLPPPKPTLPVEAP------VKEPSKPVQSLASVLASWELGDEILADQ- 2678
                       L   P  T P  +       V      V ++          ++ L D+ 
Sbjct: 72   -----------LSGTPPETGPASSAAAAGDGVSGGQGEVDAIRPEREETPAAEQPLVDEV 120

Query: 2677 ---------NAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKR 2525
                       H+VP  AGWFSWK+IH +E+++LPSFFNGK E R PE+YL IRN+IM +
Sbjct: 121  FEAVRSRGAGVHVVPTFAGWFSWKEIHLVEKQTLPSFFNGKSEKRTPEVYLAIRNSIMVK 180

Query: 2524 FHTSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            FH +P   +   D++++ + E +DA Q +LEFLDHWGLINF
Sbjct: 181  FHANPQLQLESKDLAELSTGE-ADARQEVLEFLDHWGLINF 220


>ref|XP_004981949.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X4 [Setaria
            italica]
          Length = 908

 Score =  237 bits (605), Expect(2) = 1e-89
 Identities = 186/618 (30%), Positives = 287/618 (46%), Gaps = 70/618 (11%)
 Frame = -3

Query: 2391 ELNEAVEKKENA--DTSSTLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSE 2221
            E ++  E ++N+  +  ++L+E L+ F+ + +  +  P K              +P + E
Sbjct: 229  EESKPEESQDNSHDEDKASLIEQLFKFEPVQSYIMPLPKKEDVGAPPPLPSLFPDPVLLE 288

Query: 2220 TLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEP 2041
             ++    P+VEYHCN CS DCS KRYHC+ QADFDLC DCYN  +F  GM  TDF+LM+ 
Sbjct: 289  DVVAAAEPSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDS 348

Query: 2040 VRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE 1864
              + G +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F +
Sbjct: 349  SEVSGASGTSWTDEETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHD 408

Query: 1863 DNAV----PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT-----------A 1729
               +    P  T Q+  E+  ++               TV     E+T           A
Sbjct: 409  GEDINQNTPGSTEQATTEKGIAETSEKMEVEDKEEGRDTVDEKVSEKTDGNCEETKPEGA 468

Query: 1728 AAMDMID--------------KEKNENGSEDGPQVFE-------------XXXXXXXXXA 1630
            +A++  D               E+ +  S++ P V E                      A
Sbjct: 469  SAVENKDTQNSGGKDSAASPNTEEPKQSSDEHPIVKENSGDVDTSGEKLSNVALDILKSA 528

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F A G     E   S + AGNPVM LAAFLAG+V+   A+ S +S+L+ + E   +L +A
Sbjct: 529  FEAAGH--SPEYQGSFAAAGNPVMALAAFLAGLVEDDNATTSCRSSLKAISEVSPALQLA 586

Query: 1449 SKHCFQLEDPPAEENGL-----TKRTDTD--KMEEIPLLQVEVSEQPMPSETDNSILPVV 1291
            S+HCF LEDPP +   +      K TD D  K EE+    V+  ++    + DNS+    
Sbjct: 587  SRHCFILEDPPNDLKDIYVSVSNKSTDGDQTKDEEMTQNSVDTEKKENNEKEDNSLSMEK 646

Query: 1290 --PKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDGPDKQDLISS 1117
                S    +   +++  +  +D  V +  T         T    K   D     ++ +S
Sbjct: 647  HNNSSISHNDHQESDDKSISRDDCPVVEPKTSNAKESGDSTAIVDKSATDNTKGSNICAS 706

Query: 1116 GKL---------VEGNDK-----KEDLDKVVDSNPTEQAKVQEENKPSDVSVEGVNSDMN 979
                        VE  D      K++L+K  D+     A VQE+ K S+    G   + N
Sbjct: 707  DPKQVKDKPSVEVEARDDSSSKGKDELNKTEDA-VASPANVQEQ-KQSETLENGKMGEPN 764

Query: 978  K-KTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAADII 802
              ++    E          +  + +L+RAA T +S+A+VKAK L +QEE  I++L A +I
Sbjct: 765  SIESVVANEEKGSGVTANQNDSITRLRRAAATAISAAAVKAKFLGDQEEYHIRRLTAMMI 824

Query: 801  DNQLRKLEFKMRSLHQLE 748
            +   +K+E KM    ++E
Sbjct: 825  EKLFQKIEVKMSLFAEIE 842



 Score =  123 bits (308), Expect(2) = 1e-89
 Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXXXXXXXXX 2837
            +RRGG  KRK++  SS  PSKR A+ER    H+PP   ++ P+                 
Sbjct: 20   RRRGGGGKRKSSG-SSFTPSKRQAKERNAAFHVPPHLLHSGPLTRAARQSPHK------- 71

Query: 2836 XXXXXXXXXXSLLPPPKPTLPVEAP------VKEPSKPVQSLASVLASWELGDEILADQ- 2678
                       L   P  T P  +       V      V ++          ++ L D+ 
Sbjct: 72   -----------LSGTPPETGPASSAAAAGDGVSGGQGEVDAIRPEREETPAAEQPLVDEV 120

Query: 2677 ---------NAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKR 2525
                       H+VP  AGWFSWK+IH +E+++LPSFFNGK E R PE+YL IRN+IM +
Sbjct: 121  FEAVRSRGAGVHVVPTFAGWFSWKEIHLVEKQTLPSFFNGKSEKRTPEVYLAIRNSIMVK 180

Query: 2524 FHTSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            FH +P   +   D++++ + E +DA Q +LEFLDHWGLINF
Sbjct: 181  FHANPQLQLESKDLAELSTGE-ADARQEVLEFLDHWGLINF 220


>ref|XP_004981946.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X1 [Setaria
            italica]
          Length = 939

 Score =  234 bits (596), Expect(2) = 1e-88
 Identities = 191/647 (29%), Positives = 297/647 (45%), Gaps = 99/647 (15%)
 Frame = -3

Query: 2391 ELNEAVEKKENA--DTSSTLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSE 2221
            E ++  E ++N+  +  ++L+E L+ F+ + +  +  P K              +P + E
Sbjct: 229  EESKPEESQDNSHDEDKASLIEQLFKFEPVQSYIMPLPKKEDVGAPPPLPSLFPDPVLLE 288

Query: 2220 TLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEP 2041
             ++    P+VEYHCN CS DCS KRYHC+ QADFDLC DCYN  +F  GM  TDF+LM+ 
Sbjct: 289  DVVAAAEPSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDS 348

Query: 2040 VRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE 1864
              + G +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F +
Sbjct: 349  SEVSGASGTSWTDEETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHD 408

Query: 1863 DNAV----PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT-----------A 1729
               +    P  T Q+  E+  ++               TV     E+T           A
Sbjct: 409  GEDINQNTPGSTEQATTEKGIAETSEKMEVEDKEEGRDTVDEKVSEKTDGNCEETKPEGA 468

Query: 1728 AAMDMID--------------KEKNENGSEDGPQVFE-------------XXXXXXXXXA 1630
            +A++  D               E+ +  S++ P V E                      A
Sbjct: 469  SAVENKDTQNSGGKDSAASPNTEEPKQSSDEHPIVKENSGDVDTSGEKLSNVALDILKSA 528

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F A G     E   S + AGNPVM LAAFLAG+V+   A+ S +S+L+ + E   +L +A
Sbjct: 529  FEAAGH--SPEYQGSFAAAGNPVMALAAFLAGLVEDDNATTSCRSSLKAISEVSPALQLA 586

Query: 1449 SKHCFQLEDPPAE--------ENGLTKRTDTD--KMEEIPLLQVEVSEQPMPSETDNSIL 1300
            S+HCF LEDPP +         N   K TD D  K EE+    V+  ++    + DNS+ 
Sbjct: 587  SRHCFILEDPPNDLKDIYVSVSNKSNKSTDGDQTKDEEMTQNSVDTEKKENNEKEDNSLS 646

Query: 1299 --------------PVVPKSPVRMETVSTEETKLKN----NDLTVSKENTGTGDLKESET 1174
                                 +  +     E K  N     D T   + + T + K    
Sbjct: 647  MEKHNNSSISHNDHQESDDKSISRDDCPVVEPKTSNAKESGDSTAIVDKSATDNTKGLTC 706

Query: 1173 VGKAKHLEDGPDKQDLISSGKLVEG-----NDKKEDLDK---VVDSNPTEQAKVQEE-NK 1021
              +   + D  ++  L++S  +V G     +D K+  DK    V++     +K ++E NK
Sbjct: 707  SVQDSVILDNVNECGLLASPVVVAGSNICASDPKQVKDKPSVEVEARDDSSSKGKDELNK 766

Query: 1020 PSDVSVEGVNSDMNKKT---DDGK----ELLEKQAEIED---------SCKLEKLKRAAV 889
              D      N    K++   ++GK      +E     E+         +  + +L+RAA 
Sbjct: 767  TEDAVASPANVQEQKQSETLENGKMGEPNSIESVVANEEKGSGVTANQNDSITRLRRAAA 826

Query: 888  TVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLE 748
            T +S+A+VKAK L +QEE  I++L A +I+   +K+E KM    ++E
Sbjct: 827  TAISAAAVKAKFLGDQEEYHIRRLTAMMIEKLFQKIEVKMSLFAEIE 873



 Score =  123 bits (308), Expect(2) = 1e-88
 Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXXXXXXXXX 2837
            +RRGG  KRK++  SS  PSKR A+ER    H+PP   ++ P+                 
Sbjct: 20   RRRGGGGKRKSSG-SSFTPSKRQAKERNAAFHVPPHLLHSGPLTRAARQSPHK------- 71

Query: 2836 XXXXXXXXXXSLLPPPKPTLPVEAP------VKEPSKPVQSLASVLASWELGDEILADQ- 2678
                       L   P  T P  +       V      V ++          ++ L D+ 
Sbjct: 72   -----------LSGTPPETGPASSAAAAGDGVSGGQGEVDAIRPEREETPAAEQPLVDEV 120

Query: 2677 ---------NAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKR 2525
                       H+VP  AGWFSWK+IH +E+++LPSFFNGK E R PE+YL IRN+IM +
Sbjct: 121  FEAVRSRGAGVHVVPTFAGWFSWKEIHLVEKQTLPSFFNGKSEKRTPEVYLAIRNSIMVK 180

Query: 2524 FHTSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            FH +P   +   D++++ + E +DA Q +LEFLDHWGLINF
Sbjct: 181  FHANPQLQLESKDLAELSTGE-ADARQEVLEFLDHWGLINF 220


>emb|CAE01777.2| OSJNBa0027H06.15 [Oryza sativa Japonica Group]
            gi|222628254|gb|EEE60386.1| hypothetical protein
            OsJ_13539 [Oryza sativa Japonica Group]
          Length = 886

 Score =  229 bits (583), Expect(2) = 4e-85
 Identities = 175/618 (28%), Positives = 275/618 (44%), Gaps = 78/618 (12%)
 Frame = -3

Query: 2388 LNEAVEKKENADTSS--TLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSET 2218
            ++E VE   NADT    ++++ L+ F+ + +  +  P++              EP ++E 
Sbjct: 205  VSELVESITNADTEEKISVVDKLFQFETLQSYLIPAPNQAEVTAPIHTPSLLSEPTLTED 264

Query: 2217 LMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPV 2038
             +     +VEYHCN CS DCS KRYHC+ QADFDLC DCY+      GM  TDF++ME  
Sbjct: 265  SITQAESSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYDKGNLDAGMSQTDFIIMESA 324

Query: 2037 RI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFED 1861
             I G  G SWTDQ          ++   W +IAEHVATKSKAQC+LHF+++PI DPF  D
Sbjct: 325  EIPGFGGTSWTDQETLLLLEALEIFQAKWGDIAEHVATKSKAQCMLHFLKMPIMDPFLHD 384

Query: 1860 NAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQTAAAMDMIDKEKNENGSE 1681
              V ++ +Q   E+ +++               T    T ++  AA   ++  + E   +
Sbjct: 385  GDVNEI-SQETAEQVSAEQGTSRVTEKMEVEDKTKEIKTNDRKTAAKPKLNLTETEVNLD 443

Query: 1680 D--------------------------------------GPQVFEXXXXXXXXXAFHAFG 1615
            D                                        +            AF A G
Sbjct: 444  DNVVANNDTKSSGDINVDVCSNTGVSNRSSDTEPTKKETSGENTSNIVNDVLKYAFEAVG 503

Query: 1614 SLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCF 1435
             +   E   S +EAGNPVM L AFL+G+VD    +    S+L+ + +   +L +A+ HCF
Sbjct: 504  HIPKIEGLGSFTEAGNPVMALVAFLSGLVDHDDVTTLCCSSLKAISDMSPALQLATMHCF 563

Query: 1434 QLEDPPAE-------------ENGLTKRTDT----------DKMEEIPLLQVEVSEQPMP 1324
             L+DPP +             + G  K  D           D ++E   L VE       
Sbjct: 564  ILQDPPNDLKDPPVSISFANTDCGQQKDKDATSNPSVTDNDDNLKEESALSVEEPNTTST 623

Query: 1323 SETDNSILPVVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDG 1144
            S  +   L    +S      V  + +   + D  +S+      D     +        + 
Sbjct: 624  SSKNTRKLSNAKESKDESPQVEPKPSSANDCDNPISQVAKRASDNIRGHSSTVLPVSLNN 683

Query: 1143 PDKQDLISSGKLVEGNDKKE------DLDKVVDSNPTEQAKVQ---EENKPSDVSV---- 1003
             ++   ISS +   GN K        + DK +  +P  + KV+    E++ +D+S     
Sbjct: 684  TNEPCSISSQEASAGNTKDTSHTEHIEGDKPIYEDPPLEGKVELNKIEHEVTDLSAVQQH 743

Query: 1002 EGVNSDMNKKTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQ 823
            E + + + K        ++K   + D   +++L+RAA + +S+A+VK+K+LA  EE  IQ
Sbjct: 744  ESIQTSLKKGYIQDHNSIKK--TVADDVSVQRLQRAAASAISAAAVKSKLLAKHEEYQIQ 801

Query: 822  KLAADIIDNQLRKLEFKM 769
            +LAA +ID QL K++ KM
Sbjct: 802  RLAALVIDKQLHKMQAKM 819



 Score =  116 bits (290), Expect(2) = 4e-85
 Identities = 77/211 (36%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRKNTN-----PSSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXX 2855
            ++T RR G  K K        PS + P KR AR+   H  PL + ++P+           
Sbjct: 13   TATYRRRGKPKPKPKRKAAKPPSPSPPPKRQARDDPPHTGPL-TRHSPLNPAPEDAPPQL 71

Query: 2854 XXXXXXXXXXXXXXXXSLLPPPKPTLPVEAPVKEPSKPVQSLASVLASWELGDEILADQN 2675
                               PPP+  +    P K P  PV      + S   G        
Sbjct: 72   HAGERD-------------PPPRAWIE---PAKLP--PVSEEVQAVLSRGAG-------- 105

Query: 2674 AHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLIS 2495
             H+VP+ AGWFSWK+IH +E+++LPSFF+G    R PE+YL IRN IMK+FH++P   + 
Sbjct: 106  VHVVPSFAGWFSWKEIHQIEKQALPSFFDGISLRRTPEIYLGIRNFIMKKFHSNPQMHLE 165

Query: 2494 LSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            L D+S++   E  DA  ++LEFL HWGLINF
Sbjct: 166  LKDLSELSDGE-MDAQLKVLEFLSHWGLINF 195


>emb|CAH67781.1| H0201G08.8 [Oryza sativa Indica Group] gi|218194220|gb|EEC76647.1|
            hypothetical protein OsI_14597 [Oryza sativa Indica
            Group]
          Length = 886

 Score =  226 bits (577), Expect(2) = 2e-84
 Identities = 173/618 (27%), Positives = 274/618 (44%), Gaps = 78/618 (12%)
 Frame = -3

Query: 2388 LNEAVEKKENADTSS--TLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSET 2218
            ++E VE   NADT    ++++ L+ F+ + +  +  P++              EP ++E 
Sbjct: 205  VSELVESITNADTEEKISVVDKLFQFETLQSYLIPAPNQAEVTAPIHTPSLLSEPTLTED 264

Query: 2217 LMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPV 2038
             +     +VEYHCN CS DCS KRYHC+ QADFDLC DCY+      GM  TDF++ME  
Sbjct: 265  SITQAESSVEYHCNSCSVDCSRKRYHCRTQADFDLCCDCYDKGNLDAGMSQTDFIIMESA 324

Query: 2037 RI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFED 1861
             I G  G SWTDQ          ++   W +IAEHVATK+KAQC+LHF+++PI DPF  D
Sbjct: 325  EIPGFGGTSWTDQETLLLLEALEIFQAKWGDIAEHVATKTKAQCMLHFLKMPIMDPFLHD 384

Query: 1860 NAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQTAAAMDMIDKEKNENGSE 1681
              V ++ +Q   E+ +++               T    T ++  AA   ++  + E   +
Sbjct: 385  GDVNEI-SQETAEQVSAEQGTSRVTEKMEVEDKTKEIKTNDRKTAAKPKLNLTETEVNLD 443

Query: 1680 D--------------------------------------GPQVFEXXXXXXXXXAFHAFG 1615
            D                                        +            AF A G
Sbjct: 444  DNVVANNDTKSSGDINVDVCSNTGVSNRSSDTEPTKKETSGENTSNIVNDVLKYAFEAVG 503

Query: 1614 SLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCF 1435
             +   E   S +EAGNPVM L AFL+G+VD    +    S+L+ + +   +L +A+ HCF
Sbjct: 504  HIPKIEDLGSFTEAGNPVMALVAFLSGLVDHDDVTTLCCSSLKAISDMSPALQLATMHCF 563

Query: 1434 QLEDPPAE-------------ENGLTKRTDT----------DKMEEIPLLQVEVSEQPMP 1324
             L+DPP +             + G  K  D           D ++E   L VE       
Sbjct: 564  ILQDPPNDLKDPPVSISFANTDCGQQKDKDATSNPSVTDNDDNLKEESALSVEEPNTTST 623

Query: 1323 SETDNSILPVVPKSPVRMETVSTEETKLKNNDLTVSKENTGTGDLKESETVGKAKHLEDG 1144
            S  +   L    +S      V  + +   + D  +S+      D     +        + 
Sbjct: 624  SSKNTRKLSNAKESKDESPQVEPKPSSANDCDNPISQVAKRASDNIRGHSSTVLPVSLNN 683

Query: 1143 PDKQDLISSGKLVEGNDKKE------DLDKVVDSNPTEQAKVQ---EENKPSDVSV---- 1003
             ++   ISS +   GN K        + DK +  +P  + KV+    E++ +D+S     
Sbjct: 684  TNEPCSISSQEASAGNTKDTSHTEHIEGDKPIYEDPPLEGKVELNKIEHEVTDLSAVQHH 743

Query: 1002 EGVNSDMNKKTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQ 823
            E + + + K        ++K   + D   +++L+RAA + +S+A+VK+K+LA  EE  IQ
Sbjct: 744  ESIQTSLKKGYIQDHNSIKK--TVADDVSVQRLQRAAASAISAAAVKSKLLAKHEEYQIQ 801

Query: 822  KLAADIIDNQLRKLEFKM 769
            +L A +ID QL K++ KM
Sbjct: 802  RLTALVIDKQLHKMQAKM 819



 Score =  116 bits (291), Expect(2) = 2e-84
 Identities = 77/211 (36%), Positives = 107/211 (50%), Gaps = 5/211 (2%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRK-----NTNPSSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXX 2855
            ++T RR G  K K     +  PS + P KR AR+   H  PL + ++P+           
Sbjct: 13   TATYRRRGKPKPKPKRKASKPPSPSPPPKRQARDDPPHTGPL-TRHSPLNPAPEDAPPQL 71

Query: 2854 XXXXXXXXXXXXXXXXSLLPPPKPTLPVEAPVKEPSKPVQSLASVLASWELGDEILADQN 2675
                               PPP+  +    P K P  PV      + S   G        
Sbjct: 72   HAGERD-------------PPPRAWIE---PAKLP--PVSEEVQAVLSRGAG-------- 105

Query: 2674 AHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLIS 2495
             H+VP+ AGWFSWK+IH +E+++LPSFF+G    R PE+YL IRN IMK+FH++P   + 
Sbjct: 106  VHVVPSFAGWFSWKEIHQIEKQALPSFFDGISLRRTPEIYLGIRNFIMKKFHSNPQMHLE 165

Query: 2494 LSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            L D+S++   E  DA  ++LEFL HWGLINF
Sbjct: 166  LKDLSELSDGE-MDAQLKVLEFLSHWGLINF 195


>ref|XP_004965897.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Setaria italica]
          Length = 913

 Score =  219 bits (559), Expect(2) = 3e-81
 Identities = 182/645 (28%), Positives = 281/645 (43%), Gaps = 99/645 (15%)
 Frame = -3

Query: 2382 EAVEKKENADTSS--TLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSETLM 2212
            E VE K  ADT+   +L+E L+ FK + +  +  P K              EP ++E  +
Sbjct: 222  ELVESKTGADTAEEISLVEKLFQFKTVHSYLVPVPKKADVISPVQFTSLLAEPTLAEDAI 281

Query: 2211 GPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI 2032
                 +VEYHCN CS DCS KRYHC+ Q DFDLC+DCYN  +F  GM + DF+LME   +
Sbjct: 282  TTAESSVEYHCNSCSVDCSRKRYHCRTQVDFDLCSDCYNVGKFDEGMSNADFILMEYAEV 341

Query: 2031 -GVNGASWTDQXXXXXXXXXXLY-GNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFE-- 1864
             G  G++WTDQ          ++ G  W+EIAEHVATK+K QC+L+F+++PI D F +  
Sbjct: 342  PGSGGSNWTDQETLLLLEALEIFKGKEWDEIAEHVATKTKEQCMLYFLQMPIFDYFLDGK 401

Query: 1863 --------------DNAVPDVTAQSNLEENT----------------------------S 1810
                          +    DV  + ++++N                             S
Sbjct: 402  EFSETPQKITQDLAETGTFDVPEEMDVDDNAEGKESTDEKTFKKADANSSETGTKLADQS 461

Query: 1809 KXXXXXXXXXXXXXPVTVSCSTEEQTAAAMDMIDKEKNENGSEDGPQVFEXXXXXXXXXA 1630
                           V  S   E   ++ MD  +K+   +    G               
Sbjct: 462  VSAKEDTMNPGDNVLVASSIVDESNKSSLMDPANKKNLADVDVSGEHA-SNFVIDVLRST 520

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F   G   D E   S +EAGNPVM LAAF A +V+   A  S  ++LR + E   +L +A
Sbjct: 521  FEVIGHFLDKEDLGSFAEAGNPVMALAAFFASVVEREDAVTSCCNSLRAISEISPALQLA 580

Query: 1449 SKHCFQLEDPPA-------------------------------------EENGLT----K 1393
            + HCF L DPP+                                     EE+ L     K
Sbjct: 581  TGHCFILPDPPSNLEDPTSNFSPCTGGECQGGVGGTQNVNATDKDSSEREESALALEKEK 640

Query: 1392 RTDTDKMEEIPLLQVEVS--EQPMPSETDNSILPVVPKSPVRMETVSTEETKLKNNDLTV 1219
             T T + E + L   + S  E P      NS      ++ +   +V++++ +   N +  
Sbjct: 641  ATFTSQKEHMELSNTKESFVEGPQAEVISNSTKDSDNRTAIMESSVASDKMRYGCNTIPC 700

Query: 1218 SKENTGTGD---LKESETVGKAKHLEDGPDKQDLISSGKLVEGNDKKEDLDKVVDSNPTE 1048
            S  +T T +   +   E    +      P++         VEG DK   ++   D +P+ 
Sbjct: 701  SATSTNTNEPSSIASQEASAASTKGTTNPER---------VEG-DKPSSMELPDDGSPSH 750

Query: 1047 QAKVQEENKPSDVSVEGVNSDMNKKTDDG--KELLEKQAEIEDSC--KLEKLKRAAVTVL 880
                 EE + + V+   +    + +T +G  KE    +  I  +    + +L+RAA T +
Sbjct: 751  GKVDPEEIELAPVASSSMQQHESNQTGNGNTKEPNSNENIIAAAAADPVIRLQRAAGTAV 810

Query: 879  SSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLES 745
            S+A+VKAK LA QEE  I++LAA +I+ Q +K+E KM  L ++++
Sbjct: 811  SAAAVKAKFLAEQEEVHIRQLAALVIEKQFQKMEAKMSFLSEVDN 855



 Score =  112 bits (280), Expect(2) = 3e-81
 Identities = 75/218 (34%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
 Frame = -2

Query: 3010 KRRGGSVKRKNTNPSSA----GPSKRLARERLN---------HLPPLPSNNTPIKXXXXX 2870
            +RRG + KRK    S+A     P KR A+ER             PP P N  P +     
Sbjct: 14   RRRGAATKRKERAASAALSTSPPPKRQAKERAPVDPPPLPPPPPPPAPRNRPPARKSRRK 73

Query: 2869 XXXXXXXXXXXXXXXXXXXXXSLLPPPKPTLPVEAPVKEPSKPV--QSLASVLASWELGD 2696
                                   +PPP P          P +P   Q + +VL+      
Sbjct: 74   PARKKASRRSVNPPREQEEKEEEVPPPPP----------PPRPSLEQEIEAVLSR----- 118

Query: 2695 EILADQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHT 2516
                    H+VP  AGWFSWK IH +E++ L +FF+GK E R P++YL IRN IM +FH 
Sbjct: 119  ----GAGVHVVPTFAGWFSWKGIHPIEKQMLATFFDGKSEMRTPKIYLGIRNLIMSKFHF 174

Query: 2515 SPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            +P   +   D+S++ S    DA   ILEFL HWGL+NF
Sbjct: 175  NPEVHLEAKDLSEL-SIGKMDARLEILEFLSHWGLVNF 211


>ref|XP_006650513.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Oryza brachyantha]
          Length = 755

 Score =  253 bits (647), Expect(2) = 6e-81
 Identities = 188/648 (29%), Positives = 295/648 (45%), Gaps = 67/648 (10%)
 Frame = -3

Query: 2382 EAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSK-IXXXXXXXXXXXAEPAMSETLMGP 2206
            E      + +  ++ LE L+ F+ + +  +  P K              +P++ E ++  
Sbjct: 82   EEAHSNSHCEEKTSQLEQLFKFESVQSYMIPLPKKGEVETPAPLPSLLPDPSLVEDVVSA 141

Query: 2205 QGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI-G 2029
              P+VEYHCN CS DCS KRYHC+ QADFDLC+DCYN  +F  GM  TDF+LM+   + G
Sbjct: 142  AEPSVEYHCNSCSVDCSKKRYHCRTQADFDLCSDCYNEGKFDIGMAKTDFILMDSSEVSG 201

Query: 2028 VNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFEDNAV- 1852
             +G SWTD+          ++G  W EIAEHVATK+KAQC+LHF+++ IED F  D  V 
Sbjct: 202  ASGTSWTDEETLLLLEALEIFGGKWTEIAEHVATKTKAQCMLHFLQMQIEDRFHGDEDVN 261

Query: 1851 ----------------PDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQTAAAM 1720
                             D+  +  +E+                    V   TE+  A   
Sbjct: 262  HNIQEGTEQASTEKGAVDIPEKMEVEDKAEGKDIAGDKPAEKTEDNCVEAQTEDGNAIEN 321

Query: 1719 DMID-----------KEKNENGSEDGPQVFEXXXXXXXXXAFHAFGSLADS--------- 1600
               D           K   +  S D   + +           +A     D+         
Sbjct: 322  KDTDNSGGTDSVKSPKTNEQEKSSDTDPILKDNSVGVDTSQENASSFAIDTLKSAFESVG 381

Query: 1599 ---ETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCFQL 1429
               E   S ++AGNPVM LAAFLAG+V+   A+ S +S+L+ + E   +L +A++HCF L
Sbjct: 382  YFPEHEGSFADAGNPVMALAAFLAGLVEDDTATNSCRSSLKAVSEVSPALQLATRHCFIL 441

Query: 1428 EDPPAEENGLTKRTDTDKMEEIPLLQVEVSEQPMPSETD--NSILPVVP------KSPVR 1273
            EDPP +   ++    T   +    + V+ ++  + SE +  N     VP      KSP+ 
Sbjct: 442  EDPPNDVKDMSGSASTTNTDVDQTIDVDKTQNSLDSEVEGMNEKEEAVPPAKEKRKSPIS 501

Query: 1272 METVSTEETKLKNND-------LTVSKENTGTGDL-------KESETVGKAKHLEDGPDK 1135
            ++ +   + K + ++       L   KE+ G   L       K+  T+ +A + E   DK
Sbjct: 502  LKDLHDADKKDECDEDPPVDPKLKDGKESGGPVSLHKGVPNRKKGNTM-EANNPEMVKDK 560

Query: 1134 QDLISSGKLVEGNDKKEDLDKVVDSNPTEQAKVQEENKPSDVSVEGVNSDMNKKTD---D 964
                 +      ++ K +++K    N    A   +E K S     G   +   K D   D
Sbjct: 561  SSFEVNPADDPSSEGKVEMNKT--DNAVANASTVQEQKQSQTLENGSMEEPKSKEDVAAD 618

Query: 963  GKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRK 784
            G+   +  A++ DS  + +LKRAA T +S+A+VKAK+LA+ EEE I++LAA +ID   RK
Sbjct: 619  GENGSKVTAKLTDS--ITRLKRAAATAISAAAVKAKLLADHEEEQIRQLAALMIDKLYRK 676

Query: 783  LEFKMRSLHQLESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLP 640
            +E K+  L ++E    +                   I +R+G+  + P
Sbjct: 677  VEAKVSFLTEVEHLVQRTREFTEKTRKKLLMERNAIIAARMGSLPSRP 724



 Score = 77.8 bits (190), Expect(2) = 6e-81
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = -2

Query: 2605 LPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLISLSDVSDIVSAESSDAVQRILEFL 2426
            LPSFFNGK E R PE+YL IRN IM +FH  P   +   D++++ S    DA + +L+FL
Sbjct: 2    LPSFFNGKSEKRTPEIYLGIRNFIMLKFHAKPQLQLESKDLAEL-SIGEVDAQREVLKFL 60

Query: 2425 DHWGLINF 2402
            DHWGLINF
Sbjct: 61   DHWGLINF 68


>ref|XP_002446041.1| hypothetical protein SORBIDRAFT_06g000850 [Sorghum bicolor]
            gi|241937224|gb|EES10369.1| hypothetical protein
            SORBIDRAFT_06g000850 [Sorghum bicolor]
          Length = 816

 Score =  216 bits (550), Expect(2) = 2e-79
 Identities = 192/680 (28%), Positives = 290/680 (42%), Gaps = 74/680 (10%)
 Frame = -3

Query: 2376 VEKKENADTSS--TLLENLYSFKKIDNRHLSKPSKIXXXXXXXXXXXA-EPAMSETLMGP 2206
            VE K +A+     +L+E L+ F+ + +  +    K+             EP ++E  +G 
Sbjct: 147  VESKSSAEIEDEISLVEKLFQFETVHSYLVPVSKKVEAISPVQFTSLLSEPTLAENAIGA 206

Query: 2205 QGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTDFLLMEPVRI-G 2029
               +VEYHCN CS DCS KRYHC+ Q DFD C++CYN  +F  GM   DF+LME   + G
Sbjct: 207  AESSVEYHCNSCSVDCSRKRYHCRTQVDFDFCSECYNEGKFDEGMSKADFILMESAEVPG 266

Query: 2028 VNGASWTDQXXXXXXXXXXLY-GNNWNEIAEHVATKSKAQCILHFIRLPIEDPFFED--- 1861
              G++WTDQ          ++ G  W EIAEHVATK+K QC+L+F+++PI +PF +    
Sbjct: 267  SGGSNWTDQEILLLLEALEIFKGKQWGEIAEHVATKTKEQCMLYFLQMPISEPFLDGEDF 326

Query: 1860 NAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTV---------SCSTEEQTAAA----- 1723
            N  P    + +LE   S                +          S S+E +T  A     
Sbjct: 327  NETPQKITEQDLEIGPSDVPDEMDVDGNAEGKESTDEKAYKKANSISSETRTKLADQNVS 386

Query: 1722 -----MD--------MIDKEKNENGSED------------GPQVFEXXXXXXXXXAFHAF 1618
                 MD         ID E N++   D              +             F A 
Sbjct: 387  EKEDTMDAGGDDLVASIDDESNKSSLMDPAHEKISANADVSGEHTSNFVIDVLRSTFEAV 446

Query: 1617 GSLADSETSISLSEAGNPVMVLAAFLAGIV--DPLVASCSSKSALRILCEKKSSLDIASK 1444
                  E   S +EAGNPVM LAAF A +   D  V+SC   S+LR + E   +L +A++
Sbjct: 447  DHFLGQEDLGSFAEAGNPVMALAAFFASLAEHDDAVSSCC--SSLRAISEISPALQLATE 504

Query: 1443 HCFQLEDPPA-----------------EEN--GLTKRTDT-DKMEEIPLLQVEVSEQPMP 1324
            HCF L DPP+                 +EN  GL K   T    +E P L       P  
Sbjct: 505  HCFILPDPPSDLKDPTSTFSACTGSECQENDLGLKKENATFISQKEHPELSDTKERGPDA 564

Query: 1323 SETDNSILPVVPKSPVRMETVSTEETKLKN--NDLTVSKENTGTGDLKESETVGKAKHLE 1150
                NS       +P+     S    K+++  N   +S   T     + S    +     
Sbjct: 565  EAKSNSSKD--SDNPIATVDCSVASDKMRDGCNANAISCSATSNNATEPSSIASQEASAA 622

Query: 1149 DGPDKQDLISSGKLVEGNDK-KEDLDKVVDSNPTEQAKVQEENKPSDVSVEGVNSDMNKK 973
               D     ++ + VEG+    E+L  VV  +P+++    ++ + +  +   +     K+
Sbjct: 623  STKD----TTNPEQVEGDKPGSEELPAVV--SPSQEKTEPKKIERAPAASSSIQQSECKQ 676

Query: 972  TDDGKELLEKQAE--IEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIID 799
            T +G     K  E    D   + +L+RAA T +S+A+VKAK LA QEE  I++LAA +I+
Sbjct: 677  TGNGNSEEPKSNENIASDDDPIIRLQRAAGTAISAAAVKAKFLAEQEEGYIRQLAALVIE 736

Query: 798  NQLRKLEFKMRSLHQLESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLPRSNSVTT 619
             Q +K++ KM  L ++E+   +                   I SR+G       S +   
Sbjct: 737  KQFQKIQTKMSFLTEVENLVLRSRESTERMRKKLMLERNMIIASRMGAAAAAAASRTNQQ 796

Query: 618  FASVPALVPGQSFMGGVSRP 559
             A    L  G +    + RP
Sbjct: 797  GAPGTRLPVGYALNPQLRRP 816



 Score =  109 bits (273), Expect(2) = 2e-79
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = -2

Query: 2797 PPPKPTLPVEAPVKEPSKPVQSLASVLASWELGDEILADQNAHIVPNSAGWFSWKKIHSL 2618
            PPP P  PV  P     K ++++ S  A              H+VP  AGWFSWK+IH +
Sbjct: 16   PPPPPPPPVPPPRPSREKEIEAVLSRGAG------------VHVVPTFAGWFSWKEIHPI 63

Query: 2617 EEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLISLSDVSDIVSAESSDAVQRI 2438
            E++ L +FF+GK E R PE+YL IRN IM +FH +P   +   D+ ++ S    DA   I
Sbjct: 64   EKQMLATFFDGKSERRTPEIYLGIRNLIMNKFHFNPEVHLESKDLCEL-SIGEMDARLAI 122

Query: 2437 LEFLDHWGLINF 2402
            LEFL HWGL+NF
Sbjct: 123  LEFLAHWGLVNF 134


>ref|XP_002313800.1| DNA-binding family protein [Populus trichocarpa]
            gi|222850208|gb|EEE87755.1| DNA-binding family protein
            [Populus trichocarpa]
          Length = 1010

 Score =  300 bits (769), Expect = 2e-78
 Identities = 240/801 (29%), Positives = 355/801 (44%), Gaps = 133/801 (16%)
 Frame = -3

Query: 2442 EFWNFWTIGD**TFXHLELNEAVEKK-ENADTSSTLLENLYSFKKIDNRHLSKPSKIXXX 2266
            EF ++W + +   F  L+ + A     + A    + LE L+ F+ I       P      
Sbjct: 209  EFLDYWGLIN---FHPLQFDSAPNADGDEAAKKDSSLEKLFCFEAIQPCPSIVPKPNLAA 265

Query: 2265 XXXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAER 2086
                     E A++E L   +GP+VEYHCN CSADCS KRYHCQKQAD+DLC DC+N  +
Sbjct: 266  PTTSSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKQADYDLCADCFNNGK 325

Query: 2085 FGTGMVSTDFLLMEPVR-IGVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQC 1909
            FG+ M S+DF+LMEP    G +G  WTDQ          LY  NWNEIAEHVATK+KAQC
Sbjct: 326  FGSNMSSSDFILMEPAEAAGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQC 385

Query: 1908 ILHFIRLPIEDPFF----EDNAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVT------ 1759
            ILHF+++PIED FF    + N    VT  ++   + +                +      
Sbjct: 386  ILHFVQMPIEDAFFDVTNDMNGTSKVTVDADATVDETSGPKDVLDTSESKTGASEDQPLT 445

Query: 1758 --VSCSTEEQTAAAMDMIDKEKNENGSE--DGPQVF---------------EXXXXXXXX 1636
              +  S  E T+      +  +NE  SE  +GP++                E        
Sbjct: 446  PPMEASKPEDTSEVKGSQESTENEKSSEVINGPEISKSEDASGVKVSEEMGENVALRALT 505

Query: 1635 XAFHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLD 1456
             AF A G     E  +S SE GNPVM LA+FLA +V P VA+ S++S+L+ L      + 
Sbjct: 506  EAFEAVGYSPTPENRLSFSEVGNPVMALASFLARLVGPNVATASARSSLKSLSSNYPGMQ 565

Query: 1455 IASKHCFQLEDPPAEENG-------LTKRTDTDKMEEIPLLQVEVSEQP---------MP 1324
            +A++HCF LEDPP E           T+  D D  ++    + +    P           
Sbjct: 566  LAARHCFLLEDPPEERKKPSGSDCVATEMADHDAQKDKQEEKNQKENSPTSGLGDRDLSD 625

Query: 1323 SETDNSILPVVPK-----------SPVRMETVSTEETKLKNNDL---------------- 1225
               D  +   VP+           SP ++  V+  ET + + ++                
Sbjct: 626  DHRDKKVGDSVPEEKKPLDTSKGDSPEKVNAVNEAETAVSHEEVEPCRSKESSNSELPKD 685

Query: 1224 ---TVSKENTG--------TGDLKESETVGKAK---HLEDGPDKQDLISSGKLVEGN--- 1096
               ++ KE+ G            KE+  V  A+    L +     D++S  K  E N   
Sbjct: 686  HTPSIVKESDGIPPKSACPPSSFKETLEVSSAEEHSQLTEVAKDVDMVSDLKSSEKNEPS 745

Query: 1095 ---------------DKKEDLDKVVDSNPTEQAKVQE----------------------E 1027
                           D  +D+D V DS P ++   Q+                       
Sbjct: 746  QSVASMSVDEHSQAGDASKDVDMVSDSLPADKDGSQQPAKSNAGDHSQPTESTADVDMLS 805

Query: 1026 NKPSDVSVEGVNSDMNKKTDDG-----KELLEKQAEIEDSCKLEKLKRAAVTVLSSASVK 862
            ++PS+V  +G+  +    +++G     KE L+ +  I+D  K++K+KRAAV+ LS+A+VK
Sbjct: 806  SQPSEVKPQGLKVESGATSEEGPKDSKKEKLDSEV-IKDDNKIDKIKRAAVSALSAAAVK 864

Query: 861  AKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESAYSKQXXXXXXXXXXXXXXXX 682
            AK+LANQEE+ I++LAA +I+ QL KLE K+   ++++S   +                 
Sbjct: 865  AKLLANQEEDQIRQLAASLIEKQLHKLEMKLAFFNEMDSVIMRVREQLDRSRQRLYQERA 924

Query: 681  XTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSFMGGVSRPYKPGTTKPPMFPSPMHSFR 502
              I SRLG P   P S +V    S+PA     +F     RP    T + P    PM +  
Sbjct: 925  QIIASRLGLP---PSSRAVP--PSLPANRIAMNFANAFPRPPMSMTAQRPPISRPMGALA 979

Query: 501  RVTSTDNNTPQTSTANISSSG 439
                T  +T  T+  +I  SG
Sbjct: 980  PTPDTLVSTTTTAGNSIRPSG 1000



 Score =  130 bits (326), Expect = 5e-27
 Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 6/216 (2%)
 Frame = -2

Query: 3022 GSSTKRRGGSVKRKNTNP---SSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXXX 2852
            G S +R GG  ++ N+     SS  PSKRL RE+   +  L ++N P             
Sbjct: 19   GPSRRRPGGHKRKANSLSNFFSSPLPSKRLTREKAA-ISNLSNHNGPFTRARQIPNILAS 77

Query: 2851 XXXXXXXXXXXXXXXSLLPPPKPTLPVE---APVKEPSKPVQSLASVLASWELGDEILAD 2681
                           ++  P    L  E   + V+E    +++   V+ S         D
Sbjct: 78   SALSAGVKVEQKVATAV--PDAAALVEEERRSKVEELQTEIEAEFEVIRS--------RD 127

Query: 2680 QNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKL 2501
             NAHIVP+  GWFSW KIH LEE+ LPSFFNGK ++R P+ YLEIRN IMK+F+++PN L
Sbjct: 128  SNAHIVPSHCGWFSWTKIHPLEERLLPSFFNGKSQSRTPDTYLEIRNWIMKKFNSNPNTL 187

Query: 2500 ISLSDVSDIVSAESSDAVQRILEFLDHWGLINFXXL 2393
            I + D+S++      DA Q +LEFLD+WGLINF  L
Sbjct: 188  IEVKDLSEL-EVSDLDARQEVLEFLDYWGLINFHPL 222


>ref|XP_002305423.1| DNA-binding family protein [Populus trichocarpa]
            gi|222848387|gb|EEE85934.1| DNA-binding family protein
            [Populus trichocarpa]
          Length = 1005

 Score =  286 bits (732), Expect = 4e-74
 Identities = 244/812 (30%), Positives = 356/812 (43%), Gaps = 144/812 (17%)
 Frame = -3

Query: 2442 EFWNFWTIGD**TFXHLELNEAVEKKENADTSSTL-LENLYSFKKIDNRH--LSKPSKIX 2272
            EF ++W + +   F  L+L+       +      L LE L+ F+ I      ++KP+   
Sbjct: 208  EFLDYWGLIN---FHPLQLDSVTNADGDGAAKKDLSLEKLFRFEAIQTCPPVVTKPN--F 262

Query: 2271 XXXXXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNA 2092
                       E A++E L   +GP+VEYHCN CSADCS KRYHCQK+AD+DLC DC+N 
Sbjct: 263  TAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKEADYDLCADCFNN 322

Query: 2091 ERFGTGMVSTDFLLMEPVR-IGVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKA 1915
             +FG+ M S+DF+LMEP    GV+G  WTDQ          LY  NWNEIAEHVATK+KA
Sbjct: 323  RKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKA 382

Query: 1914 QCILHFIRLPIEDPFFE---------------DNAVPDVTAQSNLEENTSKXXXXXXXXX 1780
            QCILHF+++PIED FF+               D  + D +A  ++ + +           
Sbjct: 383  QCILHFVQMPIEDAFFDCANDMDGTSKETADADATIEDTSAPKDVHDTSES---KTGADE 439

Query: 1779 XXXXPVTVSCSTEEQTAAAM-----DMID-----KEKNENGSEDGPQVFEXXXXXXXXXA 1630
                 V +  S  E T+        D+I+     K ++ +G + G ++ E         A
Sbjct: 440  DQHLTVPMEASKPEDTSGVKVCQGGDVINGQETSKSEDVSGVKAGEEIGENVALRALTEA 499

Query: 1629 FHAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIA 1450
            F A G     E  +S SE GNPVM +A+FLA +V P VA+ S+ SAL+ L      + +A
Sbjct: 500  FEAVGYSPTPENRLSFSEVGNPVMAVASFLARLVGPDVATASACSALKSLSSNSPGMQLA 559

Query: 1449 SKHCFQLEDPPAEENG-------LTKRTDTDKMEEIPLLQVEVSEQPMPSETDNSILPVV 1291
            S+HCF LEDPP E           T+  D D +++    + +    P  S  DN  L   
Sbjct: 560  SRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQEGKSQKGNSP-TSGIDNKDLS-D 617

Query: 1290 PKSPVRMETVSTEETK---------------LKNNDLTVSKENTGTGDLKES-------- 1180
              S  ++E    EE K               +   ++ V+ E    G  KES        
Sbjct: 618  DYSDKKVEDSIPEEKKPLDSSKGEFPDKVDVVNGGEMVVTHEEVEPGRSKESSNSELPKD 677

Query: 1179 ETVGKAKHLEDGPDKQ-----------------------------DLISSGKLVEGN--- 1096
             T    K  ++ P K                              D++S+ K  E N   
Sbjct: 678  HTPSVVKESDEIPPKSGCPPSSGKEPLEVTSAEEHSQLTEVAKDVDMVSNLKPPEKNGHS 737

Query: 1095 ---------------DKKEDLDKVVDSNPT---------------EQAKVQEENKPSDVS 1006
                           D  +D+D V DS P                EQ++  E     D+S
Sbjct: 738  QSFASMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSNATGEQSQTTEATADVDMS 797

Query: 1005 VEGVNSDMNKKTD--------------DGKELLEKQAEIEDSCKLEKLKRAAVTVLSSAS 868
                 S++N+ +D              D K+       I+D   ++KLKRAAV+ LS+A+
Sbjct: 798  -SSQPSEVNEPSDPKVESGATADEVPKDSKKEKPDSEVIKDDNNIDKLKRAAVSALSAAA 856

Query: 867  VKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESAYSKQXXXXXXXXXXXXXX 688
            VKAK+LANQEE+ I++LAA +I+ QL KLE K+   ++++S   +               
Sbjct: 857  VKAKLLANQEEDQIRELAASLIEKQLHKLETKLAFFNEMDSVIMRVREQLDRSRQRLYQE 916

Query: 687  XXXTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSFMGGVSRPYKPGTTKPPMFPSPMHS 508
                I +RLG P   P S ++    S+P+     +F     RP     T+ P   +PM +
Sbjct: 917  RAQIIAARLGLP---PSSRAMP--QSLPSNRIAMNFANTFPRPPMNMATQRPPISTPMGT 971

Query: 507  FRR---------VTSTDNNTPQTSTANISSSG 439
                         T+  N+   +S   ISS G
Sbjct: 972  LANTPPGTFVSTTTAAGNSIRPSSQEKISSIG 1003



 Score =  130 bits (328), Expect = 3e-27
 Identities = 59/97 (60%), Positives = 75/97 (77%)
 Frame = -2

Query: 2683 DQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNK 2504
            D NAH+VP+  GWFSW +IHSLEE+ LPSFFNGK ++R P+ YL+IRN IMK+FH +PN 
Sbjct: 126  DSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRTPDTYLDIRNWIMKKFHANPNI 185

Query: 2503 LISLSDVSDIVSAESSDAVQRILEFLDHWGLINFXXL 2393
            LI L D+S++     S+A Q +LEFLD+WGLINF  L
Sbjct: 186  LIELKDLSEL-EVSDSEARQEVLEFLDYWGLINFHPL 221


>ref|XP_004299098.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Fragaria vesca subsp.
            vesca]
          Length = 1002

 Score =  286 bits (731), Expect = 5e-74
 Identities = 220/792 (27%), Positives = 350/792 (44%), Gaps = 124/792 (15%)
 Frame = -3

Query: 2442 EFWNFWTIGD**TFXHLELNEAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSKIXXXX 2263
            EF + W + +   F       A    E      +L++ LY F+ +++R    P       
Sbjct: 213  EFLDHWGLLNFHPFPPTGSTVASVNSEEVAERDSLVDKLYRFEALESRSSLVPKTNLITP 272

Query: 2262 XXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERF 2083
                    E  ++E L+ P+GPAVEYHCN CSADCS KRYHCQKQADFDLC+DC+N  +F
Sbjct: 273  TVPSGLFPESTIAEELVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCSDCFNNGKF 332

Query: 2082 GTGMVSTDFLLMEPVRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCI 1906
             +GM STDF+LMEP    GV+G +WTDQ          LY  +WNEIA+HVATK+KAQCI
Sbjct: 333  DSGMSSTDFILMEPAEAHGVSGGNWTDQETLLLLEALELYKEDWNEIADHVATKTKAQCI 392

Query: 1905 LHFIRLPIEDPFFEDNAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQTAA 1726
            LHF+++PIED F + +   D +A+      ++                  S +  +   +
Sbjct: 393  LHFVQMPIEDTFLDHDDDLDASAKDTANPTSTNNETLPPKDTPGTTENKTSANESDPQTS 452

Query: 1725 AMDM------------IDKEKNENGSEDGPQVF---------------EXXXXXXXXXAF 1627
             M++              K K+EN  + G +                 E         AF
Sbjct: 453  PMEISKEASESKDGEDTSKPKDENEVKVGQETSNLEDTGDLKLDQETDENLALKALKEAF 512

Query: 1626 HAFGSLADSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIAS 1447
               G     E+ +S ++ GNP M LAAFLA +V P  A  S+ ++L+ +      +++AS
Sbjct: 513  EVVGYPQTPESQLSFADVGNPAMALAAFLARLVGPDHAIASAHNSLKSITADAPGIELAS 572

Query: 1446 KHCFQLEDPPAEEN--------GLTKRTDTDKMEEIPLLQVE-----VSEQPMPSETDNS 1306
            +HCF LEDPP +             +   +DK+ +    + +     + ++ + ++ D  
Sbjct: 573  RHCFILEDPPTDREEQAGRDSVAAEREAQSDKVNQEDSHKEDNSTSGLEDRGVSNDNDKK 632

Query: 1305 ILPVVPKSP----------VRMETVSTEETKLKNN---------------DLTVSKENTG 1201
            +  V P+            +  E V T++    NN               D  +    + 
Sbjct: 633  LEEVTPEEKSQSAKEQDDRISHEEVGTDKRNKSNNSELPNDQPPTLGESDDSKLEAPPSS 692

Query: 1200 TGDLKESETVGKAKHLEDGP--------------DKQDLISSGKLVEGNDKKEDLDKVVD 1063
            T +  E  +VGK     D P              + Q  ++S    + +   E   +V  
Sbjct: 693  TKESGEGTSVGKPSETTDTPMDVDVSVSIPSTKTEPQQQVASNSAEQPSQSTETTKEVDV 752

Query: 1062 SN----------------------PTEQAK---------VQEENKP-----SDVSVEGVN 991
            SN                      PTE +K           +EN+P     +  S +  +
Sbjct: 753  SNDLALDSDEPPPPVTVKSGEAPQPTETSKDVDMVCDTEPPQENEPPQPVENTTSEDQTD 812

Query: 990  SDMNKKTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAA 811
               ++K D  +   +K+ E++   K++K+K+AAV+ +S+A+VKAK+LA QEE+ I++LAA
Sbjct: 813  DSKHEKHDCTEPKNDKKQEMKGEQKIDKVKQAAVSAVSAAAVKAKLLAEQEEDQIRQLAA 872

Query: 810  DIIDNQLRKLEFKMRSLHQLESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLPRSN 631
             +I+ QL KLE K+   +++ES   +                   I +RLG    LP S+
Sbjct: 873  MLIEKQLHKLEAKLGFFNEMESVVMRVKEQLDRSRQKLYHERAQIIAARLG----LPGSS 928

Query: 630  SVTTFASVPALVPGQSFMGGVSR-PYKPGTTKPPMF-------PSPMHSFRRVTSTDNNT 475
            S    +++P      +    V R P    + +PPM        P+P++ F   T + +  
Sbjct: 929  SRGMPSAMPTNRMATNVTNAVPRPPLMMASQRPPMSRPMGAVPPTPLNQFSSTTLSGSPI 988

Query: 474  PQTSTANISSSG 439
               S  ++SS G
Sbjct: 989  RPPSQDSLSSMG 1000



 Score =  135 bits (339), Expect = 2e-28
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 6/212 (2%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRKNTN----PSSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXXX 2852
            +S++RR G  KRK ++     SS+ PSKRL RE+ + L   P +N P+            
Sbjct: 24   TSSRRRAGGQKRKASSLGGSASSSTPSKRLTREKAS-LSHAPIHNGPLTRARQGPSSHSS 82

Query: 2851 XXXXXXXXXXXXXXXSLLPPPKPTLPVEAPVKEPSKPVQSLASVLASWELGDEILA--DQ 2678
                                P+PT  +EA   E +K    L ++ A+ E   E +   D 
Sbjct: 83   ASAAASKPAAQTKR------PEPT-SLEA---EQAKRESELEALEAAMEAEFEAIRSRDA 132

Query: 2677 NAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNKLI 2498
            NAH+VP+  GWFSW KIH++EE+ LPSFF+GK +TR P+ YLEIRN I+K+FH  P  L+
Sbjct: 133  NAHVVPSHCGWFSWTKIHAIEERMLPSFFDGKSDTRTPDTYLEIRNCILKKFHADPGTLV 192

Query: 2497 SLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
             L D+ ++      ++ Q ++EFLDHWGL+NF
Sbjct: 193  ELKDMLEL-EVGDFESRQEVMEFLDHWGLLNF 223


>ref|XP_002509474.1| Transcription regulatory protein SWI3, putative [Ricinus communis]
            gi|223549373|gb|EEF50861.1| Transcription regulatory
            protein SWI3, putative [Ricinus communis]
          Length = 983

 Score =  277 bits (709), Expect = 2e-71
 Identities = 216/706 (30%), Positives = 325/706 (46%), Gaps = 108/706 (15%)
 Frame = -3

Query: 2238 EPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTD 2059
            + ++++ L+ P+GPAVEYHCN CSADCS KRYHCQ QAD+DLC DC+N  +FG+ M S+D
Sbjct: 285  DSSIADELVRPEGPAVEYHCNSCSADCSRKRYHCQTQADYDLCADCFNNGKFGSDMSSSD 344

Query: 2058 FLLMEPVRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPI 1882
            F+LMEP    G++G  WTDQ          LY  NWNEIAEHVATK+KAQCILHF+++PI
Sbjct: 345  FILMEPAEAPGISGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPI 404

Query: 1881 EDPFF------EDNAVPDVTAQSNLEENTS--KXXXXXXXXXXXXXPVTVSCSTEE---- 1738
            ED FF      + N+       +N++E ++                  T++ STE+    
Sbjct: 405  EDVFFDCCDDVDGNSKETTDPPANMDETSAPKDGMETTEDKTGAKQDQTLTSSTEDANEV 464

Query: 1737 ------------QTAAAMDMIDKEKNENGSEDGPQVFEXXXXXXXXXAFHAFGSLADSET 1594
                          A  ++   K K+ +  +    + E         AF   G  +  E 
Sbjct: 465  KVCQEIARPDNGSEAIIVEETSKSKDISEVKADQHMGENFALKALTEAFEGVGYPSTPEN 524

Query: 1593 SISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCFQLEDPPA 1414
             +S +E GNPVM LA FL  +V   VA  S++S+L+ L  +   + +A++HCF LEDPP 
Sbjct: 525  RLSFAEVGNPVMALAVFLGRLVGRDVAIASAQSSLKSLNSESPGMQLAARHCFLLEDPPD 584

Query: 1413 EENGLTKRTDTDKMEEIPLLQVEVSEQPMPS--ETDNSILPVVPKSPVRMETVSTEETKL 1240
            ++ G        K+E          +QP  S  E  N  L  V  + +       E  KL
Sbjct: 585  DKKGPAGIGCNKKIEAF----APEEKQPPDSSNEESNKKLNTVNYAGIAASHAEVEPGKL 640

Query: 1239 K------------------NNDLTVSKENTGTGDLKESETVGKAKH--LEDGPDKQDLIS 1120
            K                   N+++ SK  T    +KE+E      H  L +     D++S
Sbjct: 641  KEFNESESEKEPQMSILKETNEIS-SKSETPPSSVKETEQSLTTVHSQLTEISKDVDMVS 699

Query: 1119 SGKLVEGNDK------------------KEDLDKVVDSNPTEQAKVQEENK--------- 1021
              KL + N+                    ED+D V  S P E  + Q++ K         
Sbjct: 700  DLKLSDSNEPCQSIASVLIEEPSQAAEVSEDVDMVSHSLPQENIEQQQKVKTNSAGDHSH 759

Query: 1020 ----PSDVSV-----------------------EGVNSDMNKKTDDGKELLEKQAEIEDS 922
                P DV +                        G   D ++K  DGK+      EI+D 
Sbjct: 760  PTEAPKDVKMLSSLPSEAKEPQQQPVAPISLVENGETPDEDQK--DGKKEKPDSNEIKDD 817

Query: 921  CKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESA 742
              ++K+K AA++ LS+A+VKAK+LANQEE+ I++LAA +I+ QL KLE K+   ++++  
Sbjct: 818  HNIDKIKSAAISALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLETKLSFFNEMDHI 877

Query: 741  YSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSFMGGVSR 562
              +                   I +RLG    +P S+S     ++P      +    + R
Sbjct: 878  IMRVREQLDKSRQRLYHERAQIIATRLG----IPPSSSRAMPPTLPTNRIAMNIANSIPR 933

Query: 561  P------YKPGTTKPPMFPSPMHSFRRVTSTDNNTPQTS-TANISS 445
            P       +P  ++P    +P+ S   V++T  N+ + S   N+SS
Sbjct: 934  PPVNMNSQRPPISRPMGALAPIPSNPFVSTTAGNSIRPSGQDNLSS 979



 Score =  133 bits (335), Expect = 4e-28
 Identities = 83/214 (38%), Positives = 115/214 (53%), Gaps = 8/214 (3%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRK----NTNPSSAGPSKRLARER--LNHLPPLPSNNTPIKXXXXXXXXX 2858
            SS++RR    KRK    +T+ +S+ PSKRL RE+  ++ +P    N  P+          
Sbjct: 25   SSSRRRASGQKRKANALSTSNASSTPSKRLTREKAAISQIPV--HNGGPLTRARQSPNNL 82

Query: 2857 XXXXXXXXXXXXXXXXXSLLPPPKPTLPVEAPVKEPSKPVQSLASVLASWELGDEILA-- 2684
                                     T    A +    + V  L  +    E   E++   
Sbjct: 83   GSTAAGGGIKVEEKVAAV-------TATEAATIAALEEEVSKLEELKGGIEAEFEVIRSR 135

Query: 2683 DQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNK 2504
            D NAH+VP+  GWFSW KIH LEE++LPSFFNGK + R P++Y+EIRN I+KRFH +PN 
Sbjct: 136  DSNAHVVPHHCGWFSWPKIHPLEERALPSFFNGKSKIRTPDIYMEIRNWIVKRFHLNPNV 195

Query: 2503 LISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
             I L D+S++  A+  DA Q +LEFLD+WGLINF
Sbjct: 196  QIELKDLSELDVAD-VDAKQEVLEFLDYWGLINF 228


>gb|EXB63581.1| SWI/SNF complex subunit SWI3D [Morus notabilis]
          Length = 1006

 Score =  273 bits (697), Expect = 5e-70
 Identities = 218/684 (31%), Positives = 318/684 (46%), Gaps = 107/684 (15%)
 Frame = -3

Query: 2238 EPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAERFGTGMVSTD 2059
            E A++E L+      VEYHCN CSADCS KRYHCQKQADFDLCTDC+N  +F +GM STD
Sbjct: 302  ESAIAEELV-----RVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSTD 356

Query: 2058 FLLMEPVR-IGVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQCILHFIRLPI 1882
            F+LMEP    G++G  WTDQ          LY  NW+EIAEHVATK+KAQCILHF+++PI
Sbjct: 357  FILMEPGEGAGLSGGKWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFVQMPI 416

Query: 1881 EDPFFEDNAVPDVTAQSNLEE-NTSKXXXXXXXXXXXXXPVTVSCSTEEQTA-------- 1729
            ED F + +   D T++ N +  +T K               T +   +  T+        
Sbjct: 417  EDTFLDYDDNMDSTSKENADPASTEKDQSVPKDAGEATKGETAASENQSPTSPMETSKED 476

Query: 1728 -----AAMDMI------------DKEKNENGSED--GPQVFEXXXXXXXXXAFHAFGSLA 1606
                 A+ D              +  K + GSE   G +  E         AF A G   
Sbjct: 477  IKDVKASQDTSKPVEANEVKASQENSKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPL 536

Query: 1605 DSETSISLSEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCFQLE 1426
              E S S +E GNP M LAAFLA +V P +A+ S+ ++L+ L     S+++A +HCF LE
Sbjct: 537  TCEGSFSFAEVGNPAMALAAFLARLVGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLE 596

Query: 1425 DPPAEE-------------NGLTKRTD--TDKMEEIPLLQV--------EVSEQPMPSET 1315
            DPP +              NG T+  +   DK E+  L +         E  E+P  ++ 
Sbjct: 597  DPPNDNKEPAGLLSVDKVANGETQTDEIPCDKKEDSSLEEKTCLSAPEGESQEKPHAAKE 656

Query: 1314 DNSILPVVPKSPVRMETVSTEETKLKNNDLTVS----------------KENTG-TGDLK 1186
              +++       V ++  ST +        T+                 KE+ G +G L 
Sbjct: 657  QEAVVASEEGDSVNLKKRSTSKIIKDQPPSTLGGSGELKAEGELPPSLVKESEGKSGQLP 716

Query: 1185 ES-ETVGKAKHLEDGP----DKQDLISSGKLVEGNDKKEDL---DKVVDSNPTEQAK--- 1039
            ES ET+   +  E  P    + Q  +S     +     EDL   D V DS P E+     
Sbjct: 717  ESTETLNDVEMSEPPPSEKNEPQQNVSLNFRSDSTHSAEDLKNVDAVSDSLPLEKNDKHG 776

Query: 1038 --VQEENKPSDVSVEGV-------------------------NSDMNKKTDDGKELLEKQ 940
              V  + KP   +   V                         N+ + + T DG +     
Sbjct: 777  KIVNSDGKPPSNAARDVDMVPHSQESEKIEPPQPVLAKAIVENTAIEEPTKDGDKEKHDA 836

Query: 939  AEIEDSCKLEKLKRAAVTVLSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSL 760
             E ++  K++K+KRAA + +S+A+VKAK+LANQEE+ I++L+A +I+ QL+K+E K+   
Sbjct: 837  LETKEH-KIDKIKRAAASAISAAAVKAKLLANQEEDQIRRLSALLIEKQLQKMETKLAFF 895

Query: 759  HQLESAYSKQXXXXXXXXXXXXXXXXXTIVSRLGNPTTLPRSNSVTTFASVPALVPGQSF 580
            +++E+   +                   I +RLG    LP S+S    +S+P    G + 
Sbjct: 896  NEMENVVMRVREQMDRSRQRLYHERAQIIAARLG----LPASSSRVMPSSLPGNRIGVNI 951

Query: 579  MGGVSRPYKPGTTKPPMFPSPMHS 508
             G V+RP     ++ P    PM S
Sbjct: 952  AGSVTRPPLSMVSQRPPMSRPMGS 975



 Score =  129 bits (325), Expect = 6e-27
 Identities = 81/221 (36%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
 Frame = -2

Query: 3019 SSTKRRGGSVKRKNTNPSSAG----PSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXXX 2852
            +S++RR G  KRK+ N  S+G    PSKR  RE+ +   P P +N P+            
Sbjct: 24   TSSRRRAGGQKRKSGNLGSSGSSSAPSKRATREKSSLSHP-PIHNGPLTRARQAPSSLSS 82

Query: 2851 XXXXXXXXXXXXXXXSLLPPPKPT---------LPVEAPVKEPSKPVQSLASVLASWELG 2699
                              P  +               A V E  +    L ++ +  E  
Sbjct: 83   SLASADGAPAASASGGAKPAAEQARVPGVLGGETVAAASVAEELRKESELEALESGLEAK 142

Query: 2698 DEILADQN--AHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKR 2525
             + +  ++  AH+VP+  GWFSW KIH +EE++LPSFFNGK E R  + YLEIRN IMK+
Sbjct: 143  FQAIRSRSNSAHVVPSHCGWFSWTKIHPIEERTLPSFFNGKSELRTADTYLEIRNWIMKK 202

Query: 2524 FHTSPNKLISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
            FH++P+  I L D+S++      DA Q +LEFLDHWGLINF
Sbjct: 203  FHSNPSTQIELKDLSEL-EVGDLDARQEVLEFLDHWGLINF 242


>ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Solanum lycopersicum]
          Length = 945

 Score =  267 bits (683), Expect = 2e-68
 Identities = 222/727 (30%), Positives = 324/727 (44%), Gaps = 85/727 (11%)
 Frame = -3

Query: 2442 EFWNFWTIGD**TFXHLEL--NEAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSKIXX 2269
            EF ++W + +   F       N  ++  E A T S L++ L+ F+  +      P     
Sbjct: 233  EFLDYWGLINYHPFPQTSSVSNVDIDGDEAAKTDS-LVDKLFRFESDETWTPVLPRSSVA 291

Query: 2268 XXXXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAE 2089
                      E A++E LM  +GPAVEYHCN CSADCS KRYHCQK+ADFDLC++C+N  
Sbjct: 292  TPSATSGFFPESAIAEELMKSEGPAVEYHCNSCSADCSRKRYHCQKEADFDLCSECFNNG 351

Query: 2088 RFGTGMVSTDFLLMEPVRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQ 1912
            +FG+GM  +DF++MEP    G +G  WTDQ          LY  NWNEIAEHVATK+KAQ
Sbjct: 352  KFGSGMSPSDFIVMEPGESGGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQ 411

Query: 1911 CILHFIRLPIEDPFFEDNAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT 1732
            CILHFI +PIED F + +A  +   +   +   SK               + S    E T
Sbjct: 412  CILHFIEMPIEDTFLDSDAEINKCVKEKEDAVLSK------------DDTSASTDAPETT 459

Query: 1731 AAAMDMID----------KEKNENGSEDGPQVFEXXXXXXXXXAFHAFGSLADSETSISL 1582
             +  D  D          K +N NG     +V E         AF A G         S 
Sbjct: 460  ESKDDGNDNQVSPTVETSKPENVNGPIPQEEVGENCALKALREAFTAAGFYPPPGEYASF 519

Query: 1581 SEAGNPVMVLAAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCFQLEDPPAEENG 1402
            +EAGNPVM +AAFL  +V+    + S +S+L+ +    S  ++A +HCF LEDPP +   
Sbjct: 520  AEAGNPVMAVAAFLVKLVEAKRVTASVRSSLKSISGNPSGENLALRHCFVLEDPPDDGKA 579

Query: 1401 LTKRTDTDKMEEIPLLQVEVSEQPMPSETDNSILPVVPKSPVRME----TVSTEETKLKN 1234
                +DTD+    P     V  +    E DN  +    K    +E    ++  EETK + 
Sbjct: 580  ---SSDTDRPANGP-----VDPEDKKDEEDNVEMQKEEKLTSVIEEKSLSIGQEETKGET 631

Query: 1233 N-DLTVSKENTGTGDLKESETVGKAKHL----EDGPDKQD-------------------- 1129
            N D    +++    + K  + + +A HL    ++ P+K D                    
Sbjct: 632  NIDKKCEEQDGENHEEKNEKELEEAAHLVSTSDENPEKSDTSKQSDPIPTDKEGEPASLK 691

Query: 1128 ---------------------LISSGKLVEGNDKKE-------------DLDKVVDSNPT 1051
                                 L S  +L  G +K+              D  K  D  P 
Sbjct: 692  ESDDADLAVGQTPSTTAESDVLTSKLELPPGFEKESVDGALMTIPSDSPDTPKDEDMMPA 751

Query: 1050 EQAKVQEEN-KPSDVSVEGVNS---DMNKKTDDGKELLEKQAEIEDSCKLEKLKRAAVTV 883
             Q K  E++ K + V   G N+   ++    D  K+ L+ + +++    +EK+KRAAVT 
Sbjct: 752  VQTKEPEQSMKSNSVLENGENTGAGEVKDSLDGRKDPLKNKNDLD----IEKIKRAAVTA 807

Query: 882  LSSASVKAKVLANQEEECIQKLAADIIDNQLRKLEFKMRSLHQLESAYSKQXXXXXXXXX 703
            L++A+VKAK LA+QEE+ I+ L   +I+ QL KLE K+   H +++   +          
Sbjct: 808  LTAAAVKAKYLADQEEDQIRLLTTSLIEKQLNKLESKITFFHDMDNVVMRVRELLERSKQ 867

Query: 702  XXXXXXXXTIVSRLGN---PTTLPRSNSVTTFA-SVPALVPGQSFMG-GVSRPYKPGTTK 538
                     + SR      P ++P +      A + P L+   S      SRP   GT  
Sbjct: 868  RLLVERSQILKSRSMTHPVPQSVPANRPGMVLANTAPRLLNAMSSQRIPFSRPIMSGTPT 927

Query: 537  PPMFPSP 517
            P  F  P
Sbjct: 928  PSSFMPP 934



 Score =  133 bits (335), Expect = 4e-28
 Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
 Frame = -2

Query: 3016 STKRRGGSVKRK----NTNPSSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXXXX 2849
            +++RRGG  KRK     +  SS  PS    R++ +  P  P +N P+             
Sbjct: 31   TSRRRGGGNKRKASAIGSGASSTPPSTLSKRQKQSAAPFPPIHNGPLTRARQQPNNAAAA 90

Query: 2848 XXXXXXXXXXXXXXSLLPPPKPTLPVEAPVK---EPSKPVQSLASVLASWELGDEILA-- 2684
                               PK  + VE  VK   E ++  + L ++ A  E G E +   
Sbjct: 91   AASAASPSGFGVRIESEVLPKAEVGVEEAVKVDKESNQVKEDLEALEAEIEAGIESIRSR 150

Query: 2683 DQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNK 2504
            D+N H+VP  AGWFSW ++H LE++++PSFFN K  +R PE+Y+EIRN IMK++HT PN 
Sbjct: 151  DRNVHVVPTHAGWFSWTEVHPLEKQTMPSFFNEKLPSRTPEIYMEIRNWIMKKYHTDPNI 210

Query: 2503 LISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
             I L+D+S++ SA   D  + ++EFLD+WGLIN+
Sbjct: 211  QIELNDLSEL-SAGDLDVKKEVMEFLDYWGLINY 243


>ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Solanum tuberosum]
          Length = 945

 Score =  265 bits (677), Expect = 1e-67
 Identities = 216/711 (30%), Positives = 321/711 (45%), Gaps = 72/711 (10%)
 Frame = -3

Query: 2442 EFWNFWTIGD**TFXHLE--LNEAVEKKENADTSSTLLENLYSFKKIDNRHLSKPSKIXX 2269
            EF ++W + +   F      +N  ++  E A T S L++ L+ F+  +      P     
Sbjct: 233  EFLDYWGLINYHPFPQTSSVVNVDIDGDEAAKTDS-LVDKLFRFESDETWTPVLPRSSVA 291

Query: 2268 XXXXXXXXXAEPAMSETLMGPQGPAVEYHCNFCSADCSSKRYHCQKQADFDLCTDCYNAE 2089
                      E A++E LM  +GPAVEYHCN CSADCS KRYHCQK+ADFDLC++C+N  
Sbjct: 292  TPSASSGFFPESAIAEELMKSEGPAVEYHCNSCSADCSRKRYHCQKEADFDLCSECFNNG 351

Query: 2088 RFGTGMVSTDFLLMEPVRI-GVNGASWTDQXXXXXXXXXXLYGNNWNEIAEHVATKSKAQ 1912
            +FG+GM  +DF++MEP    G +G  WTDQ          LY  NWNEIAEHVATK+KAQ
Sbjct: 352  KFGSGMSPSDFIVMEPGESGGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQ 411

Query: 1911 CILHFIRLPIEDPFFEDNAVPDVTAQSNLEENTSKXXXXXXXXXXXXXPVTVSCSTEEQT 1732
            CILHFI +PIED F + +A  +   +   + + SK               +     + Q 
Sbjct: 412  CILHFIEMPIEDTFLDTDAENNQCVKEKEDADLSKDDTSASIDAPETAE-SKDDGNDNQV 470

Query: 1731 AAAMDMIDKEKNENGSEDGPQVFEXXXXXXXXXAFHAFGSLADSETSISLSEAGNPVMVL 1552
            +  ++   K +N NG     +V E         AF A G         S +EAGNPVM +
Sbjct: 471  SPTVE-TSKPENVNGPIPQEEVGENCALNALREAFTAAGFYPPPGECASFAEAGNPVMAV 529

Query: 1551 AAFLAGIVDPLVASCSSKSALRILCEKKSSLDIASKHCFQLEDPPAEENGLTKRTDTDKM 1372
            AAFL  +V+    + S +S+L+ +    S  ++A +HCF LEDPP  ++G T  +DTD+ 
Sbjct: 530  AAFLVKLVEAKRVTASVRSSLKSISGNPSGENLALRHCFVLEDPP--DDGKTS-SDTDRP 586

Query: 1371 EEIPLLQVEVSEQPMPSETDNSILPVVPKSPVRME----TVSTEETKLKNNDLTVSKENT 1204
                     V  +    E DN  +    K    +E    ++  EETK + N     +E  
Sbjct: 587  -----ANGSVDPEDKKDEDDNVEMQKEEKLTSVIEEKSSSIGQEETKGETNIDKKCEEQD 641

Query: 1203 GT--GDLKESETVGKAKHL----EDGPDKQD----------------------------- 1129
            G   G+  E E + +A HL    ++ P+K D                             
Sbjct: 642  GENHGEKNEKE-LEEAAHLVSTSDENPEKSDTSKQSDPIPTEKEGEPASLKESDDAGLAV 700

Query: 1128 ------------LISSGKLVEGNDKKE-------------DLDKVVDSNPTEQAKVQEEN 1024
                        L S  +L  G +K+              D  K  D  P  Q K  E++
Sbjct: 701  GQTPSTTAESDVLTSKLELPPGFEKESVDGALTAIPSDSPDTPKDEDMMPAVQTKEPEQS 760

Query: 1023 KPSDVSVEGVNSDMNKKTDDGKELLEKQAEIEDSCKLEKLKRAAVTVLSSASVKAKVLAN 844
              S+  +E   +    +  D  +  +   + ++   ++K+K AAVT L++A+VKAK LA+
Sbjct: 761  MKSNSVLENGENTGAGEVKDSVDGRKDPLKTKNDLDIDKIKCAAVTALTAAAVKAKYLAD 820

Query: 843  QEEECIQKLAADIIDNQLRKLEFKMRSLHQLESAYSKQXXXXXXXXXXXXXXXXXTIVSR 664
            QEE+ I+ L   +I+ QL KLE K+   H +++   +                   + SR
Sbjct: 821  QEEDQIRLLTTSLIEKQLNKLESKITFFHDMDNVVMRVRELLERSKQRLLLERSQILKSR 880

Query: 663  LGN---PTTLPRSNSVTTFA-SVPALVPGQSFMG-GVSRPYKPGTTKPPMF 526
                  P ++P +     FA + P L+   S      SRP   GT  P  F
Sbjct: 881  SVTHPVPQSVPANRPGMVFANTAPRLLNAMSSQRIPYSRPIMAGTPTPSSF 931



 Score =  132 bits (332), Expect = 1e-27
 Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
 Frame = -2

Query: 3016 STKRRGGSVKRK----NTNPSSAGPSKRLARERLNHLPPLPSNNTPIKXXXXXXXXXXXX 2849
            +++RRGG  KRK     +  SS  PS    R++ + +P  P +N P+             
Sbjct: 31   TSRRRGGGHKRKASAIGSGASSTPPSTLSKRQKQSAVPFPPIHNGPLTRARQQPNNAAAA 90

Query: 2848 XXXXXXXXXXXXXXSLLPPPKPTLPVEAPVK---EPSKPVQSLASVLASWELGDEILA-- 2684
                               PK  + VE  VK   E ++  + L ++ A  E   E +   
Sbjct: 91   AASAVSPSGFGVRIESEVLPKAEVGVEEAVKVDKESNQVKEDLEALEAEIEAEIESIRSR 150

Query: 2683 DQNAHIVPNSAGWFSWKKIHSLEEKSLPSFFNGKCETRNPEMYLEIRNTIMKRFHTSPNK 2504
            D+N H+VP  AGWFSW ++H LE++++PSFFN K ++R PE+Y+EIRN IMK++HT PN 
Sbjct: 151  DRNVHVVPTHAGWFSWTEVHPLEKQTMPSFFNEKLQSRTPEIYMEIRNWIMKKYHTDPNI 210

Query: 2503 LISLSDVSDIVSAESSDAVQRILEFLDHWGLINF 2402
             I L+D+S++ SA   D  + ++EFLD+WGLIN+
Sbjct: 211  QIELNDLSEL-SAGDLDVKKEVMEFLDYWGLINY 243


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