BLASTX nr result
ID: Ephedra28_contig00009356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00009356
(725 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK27001.1| unknown [Picea sitchensis] 86 2e-14
ref|XP_006851238.1| hypothetical protein AMTR_s00180p00024800 [A... 75 2e-11
ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is... 59 2e-06
ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycin... 58 3e-06
ref|XP_006340131.1| PREDICTED: 50S ribosomal protein L18, chloro... 57 5e-06
ref|XP_004291639.1| PREDICTED: 50S ribosomal protein L18-like is... 57 5e-06
ref|XP_004291638.1| PREDICTED: 50S ribosomal protein L18-like is... 57 5e-06
ref|XP_004251110.1| PREDICTED: 50S ribosomal protein L18-like [S... 57 5e-06
gb|AFK35500.1| unknown [Lotus japonicus] 57 5e-06
ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm... 57 6e-06
ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 57 8e-06
>gb|ABK27001.1| unknown [Picea sitchensis]
Length = 113
Score = 85.5 bits (210), Expect = 2e-14
Identities = 40/113 (35%), Positives = 66/113 (58%)
Frame = +3
Query: 78 LAMKMMYILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXX 257
+ + Y+L L F I A V +R G ++ T S+ + ++++FE K C+
Sbjct: 1 MVLSKPYVLRLFFSHRYITANVVDRNRGHIVATASSIERELKKHFECKRTCNAKAAAVVG 60
Query: 258 XXLARRLTLLGIPEIHSNIQRTLDQGFRYHHKTWKLINAVRSNSIKVTDSDGL 416
LA R+ + G+PEI+SN+Q+ L++GF+ K W LIN++RS+ IK+ D GL
Sbjct: 61 DVLAMRIKVEGLPEIYSNVQKELNKGFKNRTKIWALINSLRSHGIKIIDDAGL 113
>ref|XP_006851238.1| hypothetical protein AMTR_s00180p00024800 [Amborella trichopoda]
gi|548854921|gb|ERN12819.1| hypothetical protein
AMTR_s00180p00024800 [Amborella trichopoda]
Length = 103
Score = 75.1 bits (183), Expect = 2e-11
Identities = 36/96 (37%), Positives = 58/96 (60%)
Frame = +3
Query: 129 IEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARRLTLLGIPEIHS 308
I A V +R GR++ + S+ + +++ FE C+ LA R + GIPEI+S
Sbjct: 8 ITANVVDRNNGRIVASASSVERALKSGFECGRFCNSKAAAIVGEVLAMRAKVEGIPEIYS 67
Query: 309 NIQRTLDQGFRYHHKTWKLINAVRSNSIKVTDSDGL 416
NIQ+ LD+GF+ H K W LINA++++ +K+ D + L
Sbjct: 68 NIQKELDKGFKNHTKIWSLINALKNHGVKLIDDNRL 103
>ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis
sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S
ribosomal protein L18-like isoform 2 [Cucumis sativus]
Length = 129
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L L I A V +R GRV+ T ST + SI+ E C+ LA R
Sbjct: 7 YVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMR 66
Query: 276 LTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKV 398
L + G+ + IH++I++ ++ +GF+ H K W ++N++++N +K+
Sbjct: 67 LKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKL 113
>ref|NP_001238725.1| uncharacterized protein LOC100500222 [Glycine max]
gi|571443464|ref|XP_006576181.1| PREDICTED:
uncharacterized protein LOC100500222 isoform X1 [Glycine
max] gi|571443466|ref|XP_006576182.1| PREDICTED:
uncharacterized protein LOC100500222 isoform X2 [Glycine
max] gi|571443468|ref|XP_006576183.1| PREDICTED:
uncharacterized protein LOC100500222 isoform X3 [Glycine
max] gi|571443470|ref|XP_006576184.1| PREDICTED:
uncharacterized protein LOC100500222 isoform X4 [Glycine
max] gi|255629748|gb|ACU15223.1| unknown [Glycine max]
Length = 128
Score = 58.2 bits (139), Expect = 3e-06
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L L I A V +R GR++V+ ST + +I+ E C+ LARR
Sbjct: 7 YVLRLFISLKYITANVVDRNNGRIVVSSSTAEHTIKESLECGRSCNAKAAAVVGEVLARR 66
Query: 276 LTLLGIPE-----IHSNIQRTL-DQGFRYHHKTWKLINAVRSNSIKVTDSD 410
L + G+ E IH+NI + + +GF+ K W ++NA+++N +K+ D
Sbjct: 67 LKVEGLNEGEGRGIHANITKEVGKKGFKNQTKVWAVVNALKNNGVKLILDD 117
>ref|XP_006340131.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
tuberosum]
Length = 128
Score = 57.4 bits (137), Expect = 5e-06
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L L I A V +R GR++ T ST + S+++ E C+ LA R
Sbjct: 7 YVLRLFISLKYITANVVDRNNGRIVATSSTVEHSVKQSLECGRTCNAKAAAIVGEVLAMR 66
Query: 276 LTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
L + G+ + IH N+ + ++ +GF+ K W ++N ++SN +K+ D
Sbjct: 67 LKVEGLDQGQGNGIHVNVNKEVEKKGFKNRTKVWAIVNGLKSNGVKLILDD 117
>ref|XP_004291639.1| PREDICTED: 50S ribosomal protein L18-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 125
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 78 LAMKMMYILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXX 257
+++ Y+L L I A V +R GR++VT ST + S++ E C+
Sbjct: 1 MSVMKRYVLRLFISLKYITANVVDRNNGRIVVTASTIEHSVKGSLECGRSCNAKAASVVG 60
Query: 258 XXLARRLTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
LA RL + G+ + IH N+ ++ +GF+ K W ++NA+++N +K+ D
Sbjct: 61 EVLAMRLKVEGLDQGQGQGIHINVNNEVEKKGFKNRTKVWAIVNALKNNGVKLILDD 117
>ref|XP_004291638.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 140
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 78 LAMKMMYILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXX 257
+++ Y+L L I A V +R GR++VT ST + S++ E C+
Sbjct: 16 MSVMKRYVLRLFISLKYITANVVDRNNGRIVVTASTIEHSVKGSLECGRSCNAKAASVVG 75
Query: 258 XXLARRLTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
LA RL + G+ + IH N+ ++ +GF+ K W ++NA+++N +K+ D
Sbjct: 76 EVLAMRLKVEGLDQGQGQGIHINVNNEVEKKGFKNRTKVWAIVNALKNNGVKLILDD 132
>ref|XP_004251110.1| PREDICTED: 50S ribosomal protein L18-like [Solanum lycopersicum]
Length = 128
Score = 57.4 bits (137), Expect = 5e-06
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L L I A V +R GR++ T ST + S+++ E C+ LA R
Sbjct: 7 YVLRLFISLKYITANVVDRNNGRIVATSSTVEHSVKQSLECGRTCNAKAAAIVGEVLAMR 66
Query: 276 LTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
L + G+ + IH N+ + ++ +GF+ K W ++N ++SN +K+ D
Sbjct: 67 LKVEGLDQGQGNGIHVNVNKEVEKKGFKNRTKVWAIVNGLKSNGVKLILDD 117
>gb|AFK35500.1| unknown [Lotus japonicus]
Length = 128
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +3
Query: 78 LAMKMMYILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXX 257
+ + Y+L L I A V +R GR++ T ST + +++ E C+
Sbjct: 1 MTLMKRYVLRLFTSLKYITANVVDRNNGRIVATSSTVEHAMKESLECGRSCNAKAAAIVG 60
Query: 258 XXLARRLTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
LARRL + G+ E IH N+++ ++ +GF+ K W ++NA+++N +K+ D
Sbjct: 61 EVLARRLKVEGLNEGEGRGIHVNVKKEVEKKGFKNQTKIWAVVNALKNNGVKLVLDD 117
>ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis]
gi|223537000|gb|EEF38636.1| conserved hypothetical
protein [Ricinus communis]
Length = 129
Score = 57.0 bits (136), Expect = 6e-06
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L + I A V +R GR++ T ST + SI+ E C+ LA R
Sbjct: 7 YVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVGEVLAMR 66
Query: 276 LTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKVTDSD 410
L + G+ + IH + + ++ +GF+ K W +INA+R+N +KV +D
Sbjct: 67 LKVEGLEQGQGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISND 117
>ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
[Cucumis sativus]
Length = 129
Score = 56.6 bits (135), Expect = 8e-06
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Frame = +3
Query: 96 YILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXXLARR 275
Y+L L I A V +R GRV+ T ST + SI+ E C+ LA R
Sbjct: 7 YVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMR 66
Query: 276 LTLLGIPE-----IHSNIQRTLD-QGFRYHHKTWKLINAVRSNSIKV 398
L + G+ + IH++ ++ ++ +GF+ H K W ++N++++N +K+
Sbjct: 67 LKVDGLEQGQGRGIHADXKKEIEKKGFKNHTKIWAIVNSLKNNGVKL 113