BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009328
         (3598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [A...   362   7e-97
ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dicty...   171   2e-39
ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dict...   159   1e-35
gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysp...   150   5e-33
ref|XP_004353761.1| RNA recognition motif domain containing prot...   149   1e-32
ref|XP_004357361.1| SAP DNA-binding domain-containing protein [D...   145   1e-31
ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, parti...   103   7e-19
ref|XP_001638999.1| predicted protein [Nematostella vectensis] g...   100   4e-18
ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-l...    97   5e-17
ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca...    95   3e-16
ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus la...    95   3e-16
ref|XP_005846462.1| hypothetical protein CHLNCDRAFT_58266 [Chlor...    92   2e-15
ref|XP_006905949.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    91   3e-15
ref|XP_006905948.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    91   3e-15
gb|ELK17847.1| Ribonucleoprotein PTB-binding 1 [Pteropus alecto]       90   6e-15
ref|XP_003340743.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleopr...    90   6e-15
ref|XP_005902971.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    90   8e-15
ref|XP_005902970.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    90   8e-15
ref|XP_006875146.1| PREDICTED: ribonucleoprotein PTB-binding 1 [...    89   1e-14
sp|Q8IY67.1|RAVR1_HUMAN RecName: Full=Ribonucleoprotein PTB-bind...    89   1e-14

>ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [Amborella trichopoda]
            gi|548862718|gb|ERN20076.1| hypothetical protein
            AMTR_s00071p00202370 [Amborella trichopoda]
          Length = 986

 Score =  362 bits (929), Expect = 7e-97
 Identities = 228/541 (42%), Positives = 307/541 (56%), Gaps = 10/541 (1%)
 Frame = -2

Query: 3465 SKEFGENNGKPQILDENNADLQEKIVDTQNQNENPKVENAPDGLVNEGEEIEKKEGVPVT 3286
            +KE G+ +G   +  +   D    I +  N+ E   +EN  D  +NE             
Sbjct: 160  NKEPGKEDGSMGMGVDKQNDKAFGIGNGLNERE---IENEGDKDINE------------- 203

Query: 3285 ENGSAEDLVIPHMDYQENGNVDAKEGEGHPVEDEKSTVVENGSNGVCGQXXXXXXXXXXX 3106
            ENG  +D+ +   +  E G+ + + G+    E +++   E+ + GV  +           
Sbjct: 204  ENGEGDDVGLGVKEAPEKGDDEKEIGK----ETDENLNEESDNRGVVKEDG--------- 250

Query: 3105 XXXXXXDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQVSS 2926
                      E++   PE   V I SHW  K  +R+ + GGS  EEEL+PLF++ G+VSS
Sbjct: 251  -------ARTEEEEQFPEVKTVEILSHWLPKPCVRVTITGGSATEEELLPLFTEHGKVSS 303

Query: 2925 IVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQSESLLFIGNLT 2746
            I F+NE++D  V+RF+S   + +     V+EKL NTQ G RTLL+E F+++SLLF+GNLT
Sbjct: 304  IAFENEKRDATVVRFDSAPGDNQ-LAATVQEKLHNTQLGVRTLLVEAFRADSLLFVGNLT 362

Query: 2745 PDIDDNALRQMFEKHGHIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMGNISMDGR 2566
            PDIDD++LR MFE HG +ERAFVL NAAG+SK YGF+EY LKSQA AAK+ MG ++MDGR
Sbjct: 363  PDIDDSSLRTMFEPHGKVERAFVLRNAAGQSKGYGFIEYSLKSQAIAAKTTMGVVNMDGR 422

Query: 2565 VLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFR 2386
            VLRVEWSDC+ + DMFS+VLFVDR+ K  PN E  +R+LF QYGKV+DC L +G N   R
Sbjct: 423  VLRVEWSDCKNIEDMFSTVLFVDRISKHMPNPELALRSLFGQYGKVKDCFLPIGINGNIR 482

Query: 2385 GXXXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAKSPQSYKLRFGNSSQSNNFANM 2206
            G           ADKAH  LDG+   G  IRVSFANP+KS QSYK R GN   +  F  M
Sbjct: 483  GFGFIDFFHSACADKAHIALDGHELGGLNIRVSFANPSKSAQSYKQRLGNQGPAQAFGGM 542

Query: 2205 NRGAHSGMMGANPMRGQMPMQVVGQRYRAPARTGM------MQYGRGSHVGKPNNQGHA- 2047
             RGA  GM  A+   G MP  +  Q   A AR+ +      M Y RG+ +G    + +  
Sbjct: 543  GRGAIPGMTAASRGNGYMPF-MANQFVGAVARSSVLGVGAGMAYNRGTPMGPRILEQNVM 601

Query: 2046 -SASGMLVTNTGPTGMMGRPP-MNMLSRRANATG-GNMPPLHPPSAQGHGPPNPPAIAQD 1876
               +G+L       G+MGRPP M  +S+R   +G GN+        QG  P N  A AQ 
Sbjct: 602  DRGNGILSAGAPMAGVMGRPPFMGNISQRQGMSGLGNLASAQHFINQGTYPSNLAAAAQM 661

Query: 1875 A 1873
            A
Sbjct: 662  A 662


>ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dictyostelium purpureum]
            gi|325084778|gb|EGC38198.1| hypothetical protein
            DICPUDRAFT_86618 [Dictyostelium purpureum]
          Length = 1002

 Score =  171 bits (434), Expect = 2e-39
 Identities = 155/580 (26%), Positives = 262/580 (45%), Gaps = 47/580 (8%)
 Frame = -2

Query: 3495 EEPVIVEEKISKEFGENNGKPQILDE--NNADLQEKIVDTQNQNENPKVENAPDGLVNEG 3322
            EE    EE+  +E  E  G+ + + E  NN        +T+ Q E  +  N  D  +++ 
Sbjct: 159  EEEEEEEEEEEEEEEEEGGEDETIQEETNNTIAGSAEEETEQQEEEMEESNEQDEQIDDS 218

Query: 3321 EEIEKKEGVPVTENGSAEDLVI--------PHMDYQENGNVDAKEGEGHPVE--DEKSTV 3172
             E    E     EN + ED  +         + D +++ N +A     H     DEK+ +
Sbjct: 219  YE----ENNDNNENNTTEDQELVKELLGGNQYSDDEDSSNTNATTTTSHSFTKGDEKNKI 274

Query: 3171 VE----NGSNGVCGQXXXXXXXXXXXXXXXXXDTAKEDDGMPPEADGVSIPS---HWHEK 3013
                  N ++                         K++D +       +I      + +K
Sbjct: 275  KNEEDLNSADVDADIVNKAIQEAEKAVNEKMSSEKKKEDSLDKNKIQQAITDMEESFKKK 334

Query: 3012 SGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKE 2833
              +R+  +  S  E+EL    ++ G+V +  +++ +KD+A+++  +         +Q KE
Sbjct: 335  PSIRVAGLNDSLTEKELKDALAEHGKVHTFTYESPKKDSAIVQMEN--------YQQAKE 386

Query: 2832 KLQNTQFGERTLLIEPFQ-SESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AG 2659
            KL  T+    TL I     ++SLLF+GNL  +I    L+++FEK+G ++R  ++ +  +G
Sbjct: 387  KLSGTKLKNCTLTITEIPLADSLLFVGNLGFEITKEQLKKIFEKYGDVDRIIIMKSKRSG 446

Query: 2658 RSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKD 2482
             +K Y F++Y  K QA +AK+++G+ S + R +RV+W++ C  +  + S  +FVDRLP+ 
Sbjct: 447  ENKGYAFIDYRTKLQANSAKTSLGSFSFNRRTIRVDWAENCNSLESLHSKTIFVDRLPRS 506

Query: 2481 DPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGH 2302
              ++   ++ LFS +GK++DC++        RG           A+KA  +++    RG+
Sbjct: 507  FADIP-ILKKLFSPFGKIKDCNVVPNQYGQQRGFAFIDYTTVDEAEKAQRLMNDKDLRGY 565

Query: 2301 TIRVSFANPAKS------PQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQV 2140
             IRV+FANPAK+      PQ+         QSN  +   RG  S   GA P RG      
Sbjct: 566  KIRVNFANPAKAGHILIKPQAQSRNEHKGVQSNRGSAPTRGGISSRGGA-PGRGG----- 619

Query: 2139 VGQRYRAPARTGMMQYGRG---SHVGKP----NNQGHASASGMLVTNTGPTGMM----GR 1993
            +  R   P R G    GRG    H G P    ++  H +++     N  P  M+    G 
Sbjct: 620  ISGRGGLPGRGGAS--GRGGLHGHHGVPPPHHHHPHHPTSAYGGYPNIPPISMVPNHPGF 677

Query: 1992 PPMNMLSRRANATG---GNMPP-----LHPPSAQGHGPPN 1897
            PP +   +R+   G    N PP     L PP+A   G PN
Sbjct: 678  PPAHYNDQRSGGFGVGASNYPPHMNHSLVPPNANNRGGPN 717


>ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
            AX4] gi|60469605|gb|EAL67594.1| SAP DNA-binding
            domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1009

 Score =  159 bits (401), Expect = 1e-35
 Identities = 145/542 (26%), Positives = 234/542 (43%), Gaps = 15/542 (2%)
 Frame = -2

Query: 3444 NGKPQILDENNADLQEKIVDTQNQNENPKVENAPDGLVNEGEEIEKKEGVPVTENGSAED 3265
            NG      + + DL E+++ + + N N +  +  D  VN   E +       T + +   
Sbjct: 202  NGNGNSNGDEDQDLVEELLGSDDNNHNNQYSDDEDEDVNNNGESKTSTSTSTTTSTTTTS 261

Query: 3264 LVIPHMDYQENGNVDAKEG-EGHPVEDEKSTVVENGSNGVCGQXXXXXXXXXXXXXXXXX 3088
                  + Q+  ++D         +++ +  V E  S+                      
Sbjct: 262  TPTADENKQDLNSLDVDSSIVDKAIQEAEKAVTEKMSS-------------EKKREDSLD 308

Query: 3087 DTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNE 2908
             T  +      E     IPS       ++I  +  S  E+EL    ++ G+V +I ++  
Sbjct: 309  KTKIQQSIAEMEGSFKKIPS-------IKITGLNDSLTEKELEEALNEVGKVHTITYEGS 361

Query: 2907 RKDTAVIRF-NSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQ-SESLLFIGNLTPDID 2734
            +KD A+++  N T++         KEKL N++    TL I     ++SLLF+GNL  D+ 
Sbjct: 362  KKDFAIVQMENHTIA---------KEKLNNSKLKNCTLSITDIPLADSLLFVGNLGNDVG 412

Query: 2733 DNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLR 2557
               L++MFEKHG I+R  ++ N   G +K Y F++Y  K QA  AKS++G+I  + R LR
Sbjct: 413  KEQLKKMFEKHGTIDRIILIKNRRTGENKGYAFIDYRTKLQASTAKSSLGSIVFNRRTLR 472

Query: 2556 VEWSD-CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGX 2380
            V+W++ C  +  M S  +FVDRLP+   +V   +R +FS +GK++DC++        RG 
Sbjct: 473  VDWAENCNTMESMHSKTIFVDRLPRSFADVP-ILRKVFSPFGKIKDCNVVPNYYGQPRGF 531

Query: 2379 XXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAK------SPQSYKLRFGNSSQSNN 2218
                      A+KA  M++    +G+ IRV+FANP+K       P S +    + S  ++
Sbjct: 532  AFIDYNNVEDAEKAQRMMNEKDLKGYKIRVNFANPSKPGHSLVKPPSQQSGRSHESVPSS 591

Query: 2217 FANMNRGAHSGMMGANPMRGQ-MPMQVVGQRYRAPARTGMMQYGRGSHVG-KPNNQGHAS 2044
                 RG   G MG  P   Q   +  VG  +R     G      G H G     +G   
Sbjct: 592  SPFRGRGRGRGSMGVPPPNSQHFGIGSVGGGFRGGRGVGGYP---GDHSGIYQGGRGGRG 648

Query: 2043 ASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPP--SAQGHGPPNPPAIAQDAY 1870
              G  V  +GP  M    PM+             PP H P     G+G       +Q  +
Sbjct: 649  VGG--VNGSGPIAMERGGPMHHQPY-------GPPPHHGPMLHQSGYGSQMQHQFSQMQH 699

Query: 1869 QH 1864
            QH
Sbjct: 700  QH 701


>gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
            PN500]
          Length = 836

 Score =  150 bits (378), Expect = 5e-33
 Identities = 116/409 (28%), Positives = 189/409 (46%), Gaps = 6/409 (1%)
 Frame = -2

Query: 3477 EEKISKEFGENNGKPQILDENNADLQEKIVDTQNQNENPKVENAPDGLVNEGEEIEKKEG 3298
            EE  +    +      +   NN +  E+  D  N N + + +        EG E +  E 
Sbjct: 173  EENTNANDDKQESAAAVASNNNNEDAEEEDDENNGNADQQQQQQQQNYNGEGNEEQDDED 232

Query: 3297 VPVTENGSAEDLVIPHMDYQENGNVDAKEGEGHPVEDEKSTVVENGSNGVCGQXXXXXXX 3118
            +    N    D       Y +N N +  + E   V  E    V    N    +       
Sbjct: 233  LIDNNNKEQFDYSDNEESYPDNINDEVDQNEIEKVIKEVEESVAEKVNKTADK------- 285

Query: 3117 XXXXXXXXXXDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFG 2938
                         K ++    +     +   + +   L+I  +  +  +++L    S  G
Sbjct: 286  -------------KAEEKAKVQQSLAEMEEAFKKSPVLKIAGLTEAIIDKDLKEYLSAHG 332

Query: 2937 QVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQ-SESLLF 2761
            +V +I FD  ++D AV+       E +     VKEKL  T+    TL I     S++LLF
Sbjct: 333  KVMNITFDGPKRDIAVV-----CMENQQAHNSVKEKLNGTKLKNCTLNISEMPISDTLLF 387

Query: 2760 IGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEYGLKSQAYAAKSAMGN 2584
            IGNL P++    LR+MFEK+G ++RA V+ N  +G SK YGF+++  K QA AAKS++G+
Sbjct: 388  IGNLGPEVGREQLRKMFEKYGEVDRAIVMKNKRSGESKGYGFIDFRTKLQANAAKSSLGS 447

Query: 2583 ISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKD--DPNVEGNIRTLFSQYGKVRDCHL 2413
               +GR LRV+W+D C  +  M S  +F+DRL ++  D  +   +R LF+++GK+RDC++
Sbjct: 448  TKYNGRNLRVDWADSCSTLELMHSKTIFIDRLLRNFVDRTI---LRKLFTKFGKIRDCNV 504

Query: 2412 GLGDN-NMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAK 2269
                N    RG           A+KA + ++    +G+ IRVSF NP++
Sbjct: 505  FPNPNTGQPRGFAFIDYELVEDAEKAQKAMNDRDIQGYPIRVSFGNPSR 553


>ref|XP_004353761.1| RNA recognition motif domain containing protein [Acanthamoeba
            castellanii str. Neff] gi|440803326|gb|ELR24233.1| RNA
            recognition motif domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 647

 Score =  149 bits (375), Expect = 1e-32
 Identities = 122/382 (31%), Positives = 185/382 (48%), Gaps = 11/382 (2%)
 Frame = -2

Query: 3006 LRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEG--FLEQ-VK 2836
            L++  +G      +L P+F++FG+V  +V +  R+D  V+R     ++     F E  ++
Sbjct: 154  LQVTGVGSDITTADLEPVFAEFGKVHGLVVEPSRRDVVVVRMPHDAAQKAKAHFAEHPLR 213

Query: 2835 EKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-G 2659
             K +  Q  + TL       E  LF+GNL  D++   LR +F+ HG  ER  V+ + A G
Sbjct: 214  VKDKELQASDATL-------ECFLFVGNLNEDVEPEHLRSLFQAHGEPERTIVMRSTATG 266

Query: 2658 RSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDD 2479
            R K YGFVE   K+QA AAK+ +G  +  GR LR++W    K+ ++ S VLFVD+LP + 
Sbjct: 267  RKKGYGFVEMRTKAQAGAAKALLGATNFHGRSLRIDWCRLGKLEELHSPVLFVDKLPPNF 326

Query: 2478 PNVEGNIRTLFSQYGKVRDCHLGLGD-NNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGH 2302
             +  G +R LF ++G V++ ++ +   N++ RG           A+KA + L    FRG 
Sbjct: 327  TDYNG-LRQLFLKHGTVKNINVPVNPMNSIPRGFAFVTLSSAEEAEKARDALHDTEFRGS 385

Query: 2301 TIRVSFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQR-- 2128
             IR+SF NPAK+     +  G  S   N    +RG      G  P    +P    G R  
Sbjct: 386  HIRISFGNPAKA----DIATGPISPRFNPPAAHRGQPYARGGLYP--PPLPYHGRGGRGG 439

Query: 2127 YRAPARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGG 1948
            Y  P R G   +GRG     P       A G L       G++G P  +      +    
Sbjct: 440  YFPPMRNG---WGRGDFSFGP-------APGFL-------GLLGGPYSSYRPTGPSYQHS 482

Query: 1947 NMPPLHPPSAQ----GHGPPNP 1894
            ++PP  PPSA+    G+ PP P
Sbjct: 483  HIPPGGPPSAKRPNLGYQPPQP 504


>ref|XP_004357361.1| SAP DNA-binding domain-containing protein [Dictyostelium
            fasciculatum] gi|328870525|gb|EGG18899.1| SAP DNA-binding
            domain-containing protein [Dictyostelium fasciculatum]
          Length = 927

 Score =  145 bits (366), Expect = 1e-31
 Identities = 143/527 (27%), Positives = 232/527 (44%), Gaps = 7/527 (1%)
 Frame = -2

Query: 3450 ENNGKPQILDENNADLQEKIVDTQNQNENPKVENAPDGLVNEGEEIEKKEGVPVTENGSA 3271
            EN+ K +  +ENN +   +    Q+  E  + E++ +G  +E EE    +G     + + 
Sbjct: 146  ENSTKSEEEEENNNNNNNE----QDHQEEEEEEDSTNGTKDE-EEFMNLQGEEYDYSDNE 200

Query: 3270 EDLVIPHMDYQENGNVDAKEGEGHPVEDEKSTVVENGSNGVCGQXXXXXXXXXXXXXXXX 3091
            E+       YQ+   VD K  E   ++D   +V E     +  +                
Sbjct: 201  EN-------YQDE--VDTKRVE-EAIQDVVKSVAEKEKENLTKEKESPMTKEKKDDIKNK 250

Query: 3090 XDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDN 2911
               A +D           +   + + + L+I  +     E++L    S  G+V  + FD 
Sbjct: 251  VQLAIQD-----------MEESFKKPAILKITGLTEHIIEKDLKEFLSAHGKVLDLKFDG 299

Query: 2910 ERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTL-LIEPFQSESLLFIGNLTPDID 2734
             ++D AV+     + E +   + VK+KL  T+    TL +I+    ++LLF+GNL P++ 
Sbjct: 300  IKRDIAVV-----IMENQQTSQLVKDKLNGTKLKNCTLNIIDMPIQDTLLFVGNLGPEMT 354

Query: 2733 DNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLR 2557
             ++LR+MFEK+G  +R  ++ N   G SK YGFV+Y  + QA AAK+++G+ ++ GRVLR
Sbjct: 355  KDSLRKMFEKYGEPDRVILMKNRRTGESKGYGFVDYRTRLQANAAKASLGSTTVSGRVLR 414

Query: 2556 VEWSD-CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGX 2380
            V+W++ C  +  M S  +FVD+L K   +V   +  LFS +GK+++C + L      +G 
Sbjct: 415  VDWAETCSTLESMHSKTIFVDKLQKQYVDV-AILTKLFSPFGKIKECSIPLAGQP--KGF 471

Query: 2379 XXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAKSPQSYKLRFGNSSQSNNFANMN- 2203
                      A+KA + ++    + + IRVSF NP+K P     R G         N N 
Sbjct: 472  AFIDYESVEDAEKAQKTMNDKELQEYKIRVSFGNPSK-PGFAMTRGGGGGGERTPPNANS 530

Query: 2202 ---RGAHSGMMGANPMRGQMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNNQGHASASGM 2032
               RG  +   G    RG               R GM     G   G    +G     G 
Sbjct: 531  PHGRGERNDRGGGRGGRGGF----------HGGRGGMEHNNGGGRGGFRGGRGGGGDRGG 580

Query: 2031 LVTNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPPSAQGHGPPNPP 1891
            +    GP G  G P    + R     GG+ P        G+ PP PP
Sbjct: 581  MDHGGGPRG--GGPGRGGMDR--GGRGGHQPHF------GNFPPPPP 617


>ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, partial [Guillardia theta
            CCMP2712] gi|428169258|gb|EKX38194.1| hypothetical
            protein GUITHDRAFT_77389, partial [Guillardia theta
            CCMP2712]
          Length = 169

 Score =  103 bits (256), Expect = 7e-19
 Identities = 58/159 (36%), Positives = 89/159 (55%)
 Frame = -2

Query: 2766 LFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMG 2587
            +F+GN+ PD  +  + ++F+K G  +R+ V+ +A G S  YGF+E+   SQA  A   M 
Sbjct: 12   VFVGNIHPDTKEEEVIELFKKFGKPDRSIVMRSAEGISLGYGFLEFSDASQARKAVEGMN 71

Query: 2586 NISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGL 2407
             I    R LRV+++DCR  +  FS ++F+D+LP+   ++E  +R++FS  G + DCHL  
Sbjct: 72   LIVYKERQLRVDFADCRSKSSQFSPIVFIDQLPRTFVDLE-KLRSIFSPKGAMVDCHLAK 130

Query: 2406 GDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            G  N+ RG           A  A   L+GY   G  IRV
Sbjct: 131  GPGNVTRGFAFVEYETHDSAYSAFRELNGYKLEGQPIRV 169


>ref|XP_001638999.1| predicted protein [Nematostella vectensis]
            gi|156226124|gb|EDO46936.1| predicted protein
            [Nematostella vectensis]
          Length = 301

 Score =  100 bits (250), Expect = 4e-18
 Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 11/241 (4%)
 Frame = -2

Query: 2946 DFGQVSSIVFDN-ERKDTAVIRFNSTVSEGEGFLEQVKEK---LQNTQFGERTLLIEPFQ 2779
            D   + S +F   + KD  +    +T +   G +EQ +     L   ++ ++TL + P  
Sbjct: 51   DLQDLKSKIFQGYDVKDLVIGHVKNTATVVFGGIEQARSVISFLNTCKYHDKTLNVSPAP 110

Query: 2778 SESLLFIGNLTPDIDDNALRQMFEKHGHIERAF-VLFNAAGRSKCYGFVEYGLKSQAYAA 2602
             ESLLF+GNL  +  +     +   +G+IER F V     G SK YGFVEY  +  A  A
Sbjct: 111  PESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQA 170

Query: 2601 KSAMGNIS---MDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNVEGNIRTLFSQY 2437
            K  + N +   + GR+LRV +++   +  AD+ S  LFVDRLP+D  N  G I+ LFSQ 
Sbjct: 171  KQQLLNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKN-GGLIKELFSQT 229

Query: 2436 GKVRDCHLGLGD-NNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAKSPQ 2260
            G V    + +   N   RG           A+K     +G    G  IRV++ +P ++  
Sbjct: 230  GNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAYGSPGRTGA 289

Query: 2259 S 2257
            S
Sbjct: 290  S 290


>ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-like [Amphimedon
            queenslandica]
          Length = 454

 Score = 97.1 bits (240), Expect = 5e-17
 Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
 Frame = -2

Query: 2775 ESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-GRSKCYGFVEYGLKSQAYAAK 2599
            +SLLFIGN+        LR++F   G + R  ++++ + G SK YGFVE+  + +A  AK
Sbjct: 112  DSLLFIGNIPLWFKKENLRELFSPLGTVLRCLIIYSMSRGLSKGYGFVEFSTRDEALLAK 171

Query: 2598 SAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVR 2425
              M   ++ GR LRV+++D   +  AD+ S  LFVDRLPK   N +  ++ +F  YG + 
Sbjct: 172  HIMATKAIGGRHLRVDFADNGMQTTADLHSKTLFVDRLPKTFKN-DLVLQKMFEVYGTIN 230

Query: 2424 DCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRVSFANPAK 2269
             C + +  N   R            A++A   L+GY F+G  IRVS+  P +
Sbjct: 231  FCQVAIAPNGCPRCFAFIDFNSSFSAEEAQFNLNGYSFQGQEIRVSYGMPCR 282


>ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca rosetta]
            gi|326427548|gb|EGD73118.1| hypothetical protein
            PTSG_12218 [Salpingoeca rosetta]
          Length = 758

 Score = 94.7 bits (234), Expect = 3e-16
 Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
 Frame = -2

Query: 2841 VKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA 2662
            ++ +++   F +R +   P +++ LLF+GNL+  +    L ++    G I RAFV+ + A
Sbjct: 1    MRSRIEGAWFNDRHITTTPARTDGLLFLGNLSKRMTPARLIELGSPSGQICRAFVMVDEA 60

Query: 2661 G-RSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRL 2491
                + YGF+E+  K+ A  A++ + +  +D R +RV+        ++   S  LF+DRL
Sbjct: 61   TLEGQGYGFLEFVNKATAVKARADLASRVVDDRPIRVDLMKPVDNDISHFRSRTLFIDRL 120

Query: 2490 PKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCF 2311
            PK   NV   +R +F   GKV  C L +  N + RG           A  A  + +G   
Sbjct: 121  PKTLTNV-NKLRAMFESAGKVDFCQLVM-SNGVCRGFAFVDMASYHDALSARRLFNGAVV 178

Query: 2310 RGHTIRVSFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQ 2131
             G TIRVSF +P K+  S  +  G    +   A   R  H       P + ++    V +
Sbjct: 179  EGATIRVSFGHPQKTGAS--IMHGKEEVAKAKARAERQLH-------PSKQRLAYPPVAR 229

Query: 2130 RYRAPARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTG-PTGMMGRP--PMNML 1975
            R  AP      Q+ RG+ +  P    +   + + V+  G P GM   P  PM+ML
Sbjct: 230  R-SAPTH----QFPRGAALPPPPTASNRPVAQLQVSGNGLPHGMGNMPHHPMHML 279


>ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus laevis]
            gi|47682299|gb|AAH70699.1| MGC83237 protein [Xenopus
            laevis]
          Length = 694

 Score = 94.7 bits (234), Expect = 3e-16
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            IK + G    +E+  L  D+       F ++ K TA +    T+  GE   E    +   
Sbjct: 69   IKGLPGDISNQEVHDLLGDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AESAIRRFHQ 121

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-GRSKCY 2644
            T   +R + ++   +++LL I NL+P         +    G++ER F+++++  GR K Y
Sbjct: 122  THIRDREISVQLQPTDALLCIANLSPTYTQQQFEDLVRPFGNLERCFLIYSSTTGRPKGY 181

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKVAD--MFSSVLFVDRLPKDDPNV 2470
            GFVEY  K  A  AKS +    +  R L V WSD  ++    + S  L V++L + D   
Sbjct: 182  GFVEYMKKDSASRAKSDLLGRQLGSRTLYVHWSDVNQLTYELLHSHCLLVEQLQECD--- 238

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
             G++R  FS+      C L  G +N+++G            +   + +DG    G  +RV
Sbjct: 239  LGDLREAFSKISAPSFCQLAYGQDNLYKGFAVVEYESDTVTEMVQQQMDGSSVAGSRVRV 298

Query: 2289 SFANPAKSPQS 2257
            SF  P  + +S
Sbjct: 299  SFCAPGPAGRS 309


>ref|XP_005846462.1| hypothetical protein CHLNCDRAFT_58266 [Chlorella variabilis]
            gi|307106113|gb|EFN54360.1| hypothetical protein
            CHLNCDRAFT_58266 [Chlorella variabilis]
          Length = 750

 Score = 92.0 bits (227), Expect = 2e-15
 Identities = 114/437 (26%), Positives = 172/437 (39%), Gaps = 53/437 (12%)
 Frame = -2

Query: 3042 VSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQ---VSSIVFDNERKD----TAVIR 2884
            + +P  W  +  +RI  +  +  E EL  L    G    V S+VFD ++       A++R
Sbjct: 1    MDMPEEWRPRPMVRIWGLPAAATEAELAELLEGQGLEHGVRSVVFDPKQATQAGKVALVR 60

Query: 2883 FN----------STVSEGEGFLEQVKEKL------QNTQFGERTLLIEPFQSESLLFIGN 2752
            F+             +  E  + +V E+L      +  Q     L +E   +E  LF+ N
Sbjct: 61   FDPPAAPPLGEPGAAAAPEPDVGKVAERLIAALRARQPQLHGVKLNVEKTGAEVCLFLAN 120

Query: 2751 LTPDID-DNALRQMFEKHGHIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMGNIS- 2578
            L  + + D  LR   E++G +ER FV+ N AG SK Y F E+ L + A A K A      
Sbjct: 121  LRGEAEEDGGLRATCEQYGAVERCFVVRNPAGDSKRYAFCEFTLPASAAACKEAWNRAGD 180

Query: 2577 -----------------MDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTL 2449
                             +  ++ R E +  + VA +F++VL+VD +     N E  ++ +
Sbjct: 181  AQRPQAQRDASGAATKFVRVKLQRAEPAPVKSVAGLFATVLYVDNMSPSFTNHEA-LKKV 239

Query: 2448 FSQYGKVRDCHLGLGDNN--MFRGXXXXXXXXXXXADKAHEMLDGYCFRG-HTIRVSFAN 2278
            F +YG+V  C+L     N    RG           AD A   LD     G   + +SF+N
Sbjct: 240  FGEYGEVTSCYLPRNPTNPSACRGFAFVHFKHSFAADAAFRALDETEQPGIGKLLISFSN 299

Query: 2277 PAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYRAPARTGMM 2098
            P K+ +                ++NR A     GA+            Q+ R P      
Sbjct: 300  PVKANE----------------HLNRTAGGAGAGAS------------QQQRQPRDQQQQ 331

Query: 2097 QYGRGSHVGKPNNQGHASASGMLVTNTGPTGMMGRPPMNMLSRRANATG------GNMP- 1939
            Q   G   G+   QG A  +G      G    +  PPM     RA  TG      G M  
Sbjct: 332  QQRMGGAGGRGGAQGGAMGAGR--AGGGAAAPVPSPPMG--GMRATGTGMGQAGMGGMAG 387

Query: 1938 -PLHPPSAQGHGPPNPP 1891
             P+  P+A    PP PP
Sbjct: 388  GPIILPAAAMMPPPPPP 404


>ref|XP_006905949.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X2 [Pteropus
            alecto]
          Length = 726

 Score = 91.3 bits (225), Expect = 3e-15
 Identities = 111/419 (26%), Positives = 166/419 (39%), Gaps = 50/419 (11%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISTFHQ 132

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHIPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQWADGLALGGSHLRV 311

Query: 2289 SFANPAKS-----------------------PQSYKLRFGNS---SQS-----NNFANMN 2203
            SF  P                          P+   L+  NS   S S     N   + N
Sbjct: 312  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNSLGPSASLQLLLNPLLHGN 371

Query: 2202 RGAHSGMMGANP----MRG--------QMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNN 2059
             G   G++GA P    + G        Q+ +Q  GQ  + P   G    G      +P N
Sbjct: 372  AGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQ--KKPGILGDSPLGTLQPGAQPAN 429

Query: 2058 Q--GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMP--PLHPPSAQGHGPPNP 1894
               G  SA G L     P    G+PP  +L      +G +     L PP+AQ   PP P
Sbjct: 430  PLLGELSAGGALPPELPP--RRGKPP-PLLPPLLGPSGSDRETMSLGPPAAQLTPPPAP 485


>ref|XP_006905948.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X1 [Pteropus
            alecto]
          Length = 754

 Score = 91.3 bits (225), Expect = 3e-15
 Identities = 111/419 (26%), Positives = 166/419 (39%), Gaps = 50/419 (11%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISTFHQ 132

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHIPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQWADGLALGGSHLRV 311

Query: 2289 SFANPAKS-----------------------PQSYKLRFGNS---SQS-----NNFANMN 2203
            SF  P                          P+   L+  NS   S S     N   + N
Sbjct: 312  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNSLGPSASLQLLLNPLLHGN 371

Query: 2202 RGAHSGMMGANP----MRG--------QMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNN 2059
             G   G++GA P    + G        Q+ +Q  GQ  + P   G    G      +P N
Sbjct: 372  AGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQ--KKPGILGDSPLGTLQPGAQPAN 429

Query: 2058 Q--GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMP--PLHPPSAQGHGPPNP 1894
               G  SA G L     P    G+PP  +L      +G +     L PP+AQ   PP P
Sbjct: 430  PLLGELSAGGALPPELPP--RRGKPP-PLLPPLLGPSGSDRETMSLGPPAAQLTPPPAP 485


>gb|ELK17847.1| Ribonucleoprotein PTB-binding 1 [Pteropus alecto]
          Length = 719

 Score = 90.1 bits (222), Expect = 6e-15
 Identities = 111/424 (26%), Positives = 167/424 (39%), Gaps = 55/424 (12%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 63   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISTFHQ 115

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 116  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 175

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 176  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 235

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 236  DA-LRRALSAVHIPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQWADGLALGGSHLRV 294

Query: 2289 SFANPAKS-----------------------PQSYKLRFGNS---SQS-----NNFANMN 2203
            SF  P                          P+   L+  NS   S S     N   + N
Sbjct: 295  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNSLGPSASLQLLLNPLLHGN 354

Query: 2202 RGAHSGMMGANP----MRG--------QMPMQVVGQRY-----RAPARTGMMQYGRGSHV 2074
             G   G++GA P    + G        Q+ +Q  GQ+      + P   G    G     
Sbjct: 355  AGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQKMIVLCPQKPGILGDSPLGTLQPG 414

Query: 2073 GKPNNQ--GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMP--PLHPPSAQGHG 1906
             +P N   G  SA G L     P    G+PP  +L      +G +     L PP+AQ   
Sbjct: 415  AQPANPLLGELSAGGALPPELPP--RRGKPP-PLLPPLLGPSGSDRETMSLGPPAAQLTP 471

Query: 1905 PPNP 1894
            PP P
Sbjct: 472  PPAP 475


>ref|XP_003340743.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoprotein PTB-binding 1-like
            [Monodelphis domestica]
          Length = 801

 Score = 90.1 bits (222), Expect = 6e-15
 Identities = 102/422 (24%), Positives = 164/422 (38%), Gaps = 57/422 (13%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 118  IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AESAIRTFHQ 170

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            +   ++ L ++   +++LL I NL P        ++    G++ER F++++  +G SK Y
Sbjct: 171  SHLRDKELSVQLQPTDALLCIANLPPSYTQQQFEELVRPFGNLERCFLVYSERSGHSKGY 230

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GFVEY  K  A  AKS +    +  R L V W+D  ++  A + S  L VD LP+   +V
Sbjct: 231  GFVEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDASQLTPALLHSRCLCVDHLPQGYSDV 290

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G+++RV
Sbjct: 291  D-ELRQALSSVHPPTFCQLAYGQDGQLKGFAVLEYETSQMAEEAQQQADGLVLAGNSVRV 349

Query: 2289 SFANPAKSPQSY--KLRFGNSSQSNNFANM------------------------------ 2206
            SF  P    +S    L    ++  N    +                              
Sbjct: 350  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQILSSLGPPASLQLLLNPLLHGP 409

Query: 2205 NRGAHSGMMGANPMRG------------QMPMQVVGQRYRAPARTGMMQYGRGSHVGKPN 2062
              G   G++GA P               Q+ +Q  GQ  + P   G    G      +P+
Sbjct: 410  GGGNKQGLLGAPPAMPLLNSPALSTALLQLALQTQGQVQQKPGILGDSPLGSFQSGTQPS 469

Query: 2061 NQ--GHASASGMLVTNTGPTGMMGRPPMNML--------SRRANATGGNMPPLHPPSAQG 1912
            N   G   A G+L ++  P  + G+PP  +          R A A G +   L PP A  
Sbjct: 470  NTLLGELPAGGVLPSDIPP--VRGKPPSLLPPLLGTAGGDREALALGASATQLTPPPASL 527

Query: 1911 HG 1906
             G
Sbjct: 528  RG 529


>ref|XP_005902971.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X2 [Bos mutus]
          Length = 716

 Score = 89.7 bits (221), Expect = 8e-15
 Identities = 106/417 (25%), Positives = 161/417 (38%), Gaps = 48/417 (11%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 63   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 115

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 116  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 175

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 176  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 235

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 236  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 294

Query: 2289 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 2203
            SF  P            + Q+  L  G              N   S       N   +  
Sbjct: 295  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHSG 354

Query: 2202 RGAHSGMMGANP----------MRGQMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNNQ- 2056
             G   G++GA P              + + +  Q  + P   G    G      +P N  
Sbjct: 355  AGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDSPLGTLQPGAQPANPL 414

Query: 2055 -GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPP--LHPPSAQGHGPPNP 1894
             G  SA G L     P    G+PP  +L      +GG+  P  L PP+ Q   PP P
Sbjct: 415  LGELSAGGGLPPELPP--RRGKPP-PLLPPLLGPSGGDREPMGLGPPAPQLTPPPAP 468


>ref|XP_005902970.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X1 [Bos mutus]
            gi|440899929|gb|ELR51170.1| Ribonucleoprotein PTB-binding
            1 [Bos mutus]
          Length = 758

 Score = 89.7 bits (221), Expect = 8e-15
 Identities = 106/417 (25%), Positives = 161/417 (38%), Gaps = 48/417 (11%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 311

Query: 2289 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 2203
            SF  P            + Q+  L  G              N   S       N   +  
Sbjct: 312  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHSG 371

Query: 2202 RGAHSGMMGANP----------MRGQMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNNQ- 2056
             G   G++GA P              + + +  Q  + P   G    G      +P N  
Sbjct: 372  AGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDSPLGTLQPGAQPANPL 431

Query: 2055 -GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPP--LHPPSAQGHGPPNP 1894
             G  SA G L     P    G+PP  +L      +GG+  P  L PP+ Q   PP P
Sbjct: 432  LGELSAGGGLPPELPP--RRGKPP-PLLPPLLGPSGGDREPMGLGPPAPQLTPPPAP 485


>ref|XP_006875146.1| PREDICTED: ribonucleoprotein PTB-binding 1 [Chrysochloris asiatica]
          Length = 744

 Score = 89.0 bits (219), Expect = 1e-14
 Identities = 106/407 (26%), Positives = 161/407 (39%), Gaps = 35/407 (8%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            +Q  ER L ++   +++LL + NL P +      ++    G +ER F++++  +G SK Y
Sbjct: 133  SQLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERSGHSKGY 192

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VD LP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDHLPPGFSDV 252

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +  +R   S       C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQQADGLALGGSHLRV 311

Query: 2289 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 2203
            SF  P            + Q+  L  G              N   S       N   + N
Sbjct: 312  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHSN 371

Query: 2202 RGAHSGMMGANPMRGQMPMQVVGQRYRAPA-RTGMMQYGRGSHVGKPNNQGHASASGMLV 2026
             G   G++GA P    MP+        +PA  T ++Q            QG      +  
Sbjct: 372  AGGKQGLLGAPP---AMPL------LNSPALSTALLQLAL-------QTQGQKKPGILGD 415

Query: 2025 TNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPPSAQGHGPPNPPAI 1885
            +  GP    G  P N L    +A GG +PP  PP  +G  PP  P +
Sbjct: 416  SPLGPL-QPGAQPANPLLGELSAVGG-VPPELPP-RRGKPPPLLPPL 459


>sp|Q8IY67.1|RAVR1_HUMAN RecName: Full=Ribonucleoprotein PTB-binding 1; AltName: Full=Protein
            raver-1
          Length = 606

 Score = 89.0 bits (219), Expect = 1e-14
 Identities = 109/419 (26%), Positives = 166/419 (39%), Gaps = 50/419 (11%)
 Frame = -2

Query: 3000 IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 2821
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 63   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAINAFHQ 115

Query: 2820 TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 2644
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G+SK Y
Sbjct: 116  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGY 175

Query: 2643 GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNV 2470
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 176  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFNDV 235

Query: 2469 EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXADKAHEMLDGYCFRGHTIRV 2290
            +   R L + +     C L  G +   +G           A++A +  DG    G  +RV
Sbjct: 236  DALCRALSAVHSPT-FCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRV 294

Query: 2289 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 2203
            SF  P            + Q+  L  G              N   S       N   + +
Sbjct: 295  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHGS 354

Query: 2202 RGAHSGMMGANP----MRG--------QMPMQVVGQRYRAPARTGMMQYGRGSHVGKPNN 2059
             G   G++GA P    + G        Q+ +Q  GQ  + P   G    G      +P N
Sbjct: 355  AGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQ--KKPGILGDSPLGALQPGAQPAN 412

Query: 2058 Q--GHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPP--LHPPSAQGHGPPNP 1894
               G   A G L     P    G+PP  +L       GG+     L PP+AQ   PP P
Sbjct: 413  PLLGELPAGGGLPPELPP--RRGKPP-PLLPSVLGPAGGDREALGLGPPAAQLTPPPAP 468