BLASTX nr result

ID: Ephedra28_contig00009321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00009321
         (1128 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             113   2e-22

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  113 bits (282), Expect = 2e-22
 Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
 Frame = -3

Query: 859 LKKFF*EQPQQLQ-VTATEVKEFTRGTLAIMGSAHLIGAAXXXXXXXLERWEMISKNKEE 683
           LK+F  E    ++ +   + K   RG L  MG+AHL           LER+E +S N++E
Sbjct: 131 LKEFLSEATNFVKDIIPGDAKTIVRGLLQGMGTAHLATTGLLVVANILERFEDVSDNQDE 190

Query: 682 CLDLLENMANLVSYLYQISERSTEISQMGDCHLQEIIRECMDTIMDGYDLIWSTLTATKR 503
           C  +L+ M  L   + QI ER     +M D      +++  + I++G     S + +++ 
Sbjct: 191 CFHVLKEMIFLAKVVKQIKERPQLQQRMHD-----EVKDATELIVEGSIKCCSQMASSQF 245

Query: 502 KRFFNARNXXXXXXXXXXXLDNKYRKLMGQIMIDLSIFAPYTRPH-EFRFPPEAGGLMDE 326
             FF+              LD KY+ +  Q+ I++       + +   R+P  A GL + 
Sbjct: 246 SNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRRYPEHAVGLEES 305

Query: 325 VRTTINQMEWEDDEKALAVVLHGHSGSGKTTLGDAVCFSLNVNKPIGFSDGRCAVVRLFR 146
            R  I+ +EW   + A+AV+LHG  G GKTTL DAV FS+     +   + + + V+LF 
Sbjct: 306 SREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAV-FSM-----VDIKECQYSTVQLFE 359

Query: 145 GMNSL-QIIKAQSILINDLENSNFKP--KSTNEGRIKIGNILRNIPAFIYI 2
            ++S  +II+ Q +++ DL  S   P  +   +G+ ++  +L ++ AFIYI
Sbjct: 360 NIDSFPKIIELQKLILRDLTRSENIPQIRKHEDGQRELSRVLEDVSAFIYI 410


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