BLASTX nr result
ID: Ephedra28_contig00008996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00008996
(1088 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006597503.1| PREDICTED: pentatricopeptide repeat-containi... 159 1e-36
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi... 159 1e-36
gb|ACU23441.1| unknown [Glycine max] 159 2e-36
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 157 7e-36
ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-35
ref|XP_004499752.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-35
ref|XP_004499750.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-35
ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citr... 154 5e-35
ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containi... 154 6e-35
emb|CBI30774.3| unnamed protein product [Vitis vinifera] 154 6e-35
gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [The... 153 1e-34
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm... 153 1e-34
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi... 152 2e-34
gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus... 152 2e-34
ref|XP_002316747.1| predicted protein [Populus trichocarpa] 152 2e-34
ref|NP_001031667.1| pentatricopeptide repeat-containing protein ... 150 7e-34
ref|NP_567571.1| pentatricopeptide repeat-containing protein [Ar... 150 7e-34
emb|CAA16754.1| putative protein [Arabidopsis thaliana] gi|72686... 150 7e-34
ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arab... 150 9e-34
ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containi... 149 1e-33
>ref|XP_006597503.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X3 [Glycine max]
Length = 231
Score = 159 bits (403), Expect = 1e-36
Identities = 76/153 (49%), Positives = 98/153 (64%)
Frame = -3
Query: 459 HTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWV 280
H P + + + HLW +LV TV + P+EK AVYG LD+W
Sbjct: 61 HKSGGPMEKKGKKTTGKKEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWT 120
Query: 279 AWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRID 100
AWE EFP IAV+KAL+ILRK+ W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+D
Sbjct: 121 AWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVD 180
Query: 99 EAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
EAE LW I H RSV + LFSRMIS+Y+ +N
Sbjct: 181 EAESLWNMIIHAHMRSVSKRLFSRMISLYDHHN 213
>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Glycine max]
gi|571517206|ref|XP_006597502.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Glycine max]
Length = 288
Score = 159 bits (403), Expect = 1e-36
Identities = 76/153 (49%), Positives = 98/153 (64%)
Frame = -3
Query: 459 HTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWV 280
H P + + + HLW +LV TV + P+EK AVYG LD+W
Sbjct: 61 HKSGGPMEKKGKKTTGKKEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWT 120
Query: 279 AWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRID 100
AWE EFP IAV+KAL+ILRK+ W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+D
Sbjct: 121 AWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVD 180
Query: 99 EAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
EAE LW I H RSV + LFSRMIS+Y+ +N
Sbjct: 181 EAESLWNMIIHAHMRSVSKRLFSRMISLYDHHN 213
>gb|ACU23441.1| unknown [Glycine max]
Length = 288
Score = 159 bits (402), Expect = 2e-36
Identities = 76/153 (49%), Positives = 98/153 (64%)
Frame = -3
Query: 459 HTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWV 280
H P + + + HLW +LV TV + P+EK AVYG LD+W
Sbjct: 61 HKSGGPMEKKGKKTTGKKEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWT 120
Query: 279 AWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRID 100
AWE EFP IAV+KAL+ILRK+ W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+D
Sbjct: 121 AWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVD 180
Query: 99 EAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
EAE LW I H RSV + LFSRMIS+Y+ +N
Sbjct: 181 EAESLWNMIIHAHLRSVSKRLFSRMISLYDHHN 213
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 157 bits (397), Expect = 7e-36
Identities = 78/171 (45%), Positives = 112/171 (65%)
Frame = -3
Query: 513 QPIQNSAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTV 334
+ IQ+ +A +Q++ +N R ++ +E H HLW +LV V
Sbjct: 811 EAIQDENWKDAMNQEIDAIRRNETWERVVKKVGKETH-HLWKKRDSAGSGQKALNLVRIV 869
Query: 333 LRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMT 154
+ P+EK AVYG L++W+AWE EFP IA AKAL+ILRK++ W ++IQV KW+LSKGQ T
Sbjct: 870 SQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGAT 929
Query: 153 MGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
MGTY+ ++LAFD + R+DEAE LW I H+RS+ + +FSRMIS+YE ++
Sbjct: 930 MGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHD 980
>ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X5 [Cicer arietinum]
Length = 287
Score = 155 bits (391), Expect = 3e-35
Identities = 83/191 (43%), Positives = 116/191 (60%)
Frame = -3
Query: 573 SSLSISKPATTTTCFQLRHSQPIQNSAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHL 394
+S++IS+ + T+C + +Q+ + N + V K N + K + +H HL
Sbjct: 40 TSITISRKTSCTSC------RFVQSKSSPNV-GRPVEKDKKGN------KIKGKVEH-HL 85
Query: 393 WXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKN 214
W +LV T+ P+EK +VYG LD+W AWE EFP +A AKAL ILRK+
Sbjct: 86 WKRRNSAQSGQKALTLVRTICELPNEKESVYGALDKWTAWETEFPLVAAAKALNILRKRG 145
Query: 213 LWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALF 34
W ++IQ+ KW+LSKGQ TMGTY+ ++LAFD + RIDEAE LW I H RSV + LF
Sbjct: 146 QWVRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRIDEAESLWNMIIHAHMRSVSKRLF 205
Query: 33 SRMISMYERNN 1
SRMIS+Y+ +N
Sbjct: 206 SRMISLYDHHN 216
>ref|XP_004499752.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X3 [Cicer arietinum]
gi|502127555|ref|XP_004499753.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X4 [Cicer arietinum]
Length = 329
Score = 155 bits (391), Expect = 3e-35
Identities = 83/191 (43%), Positives = 116/191 (60%)
Frame = -3
Query: 573 SSLSISKPATTTTCFQLRHSQPIQNSAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHL 394
+S++IS+ + T+C + +Q+ + N + V K N + K + +H HL
Sbjct: 38 TSITISRKTSCTSC------RFVQSKSSPNV-GRPVEKDKKGN------KIKGKVEH-HL 83
Query: 393 WXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKN 214
W +LV T+ P+EK +VYG LD+W AWE EFP +A AKAL ILRK+
Sbjct: 84 WKRRNSAQSGQKALTLVRTICELPNEKESVYGALDKWTAWETEFPLVAAAKALNILRKRG 143
Query: 213 LWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALF 34
W ++IQ+ KW+LSKGQ TMGTY+ ++LAFD + RIDEAE LW I H RSV + LF
Sbjct: 144 QWVRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRIDEAESLWNMIIHAHMRSVSKRLF 203
Query: 33 SRMISMYERNN 1
SRMIS+Y+ +N
Sbjct: 204 SRMISLYDHHN 214
>ref|XP_004499750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502127547|ref|XP_004499751.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 331
Score = 155 bits (391), Expect = 3e-35
Identities = 83/191 (43%), Positives = 116/191 (60%)
Frame = -3
Query: 573 SSLSISKPATTTTCFQLRHSQPIQNSAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHL 394
+S++IS+ + T+C + +Q+ + N + V K N + K + +H HL
Sbjct: 40 TSITISRKTSCTSC------RFVQSKSSPNV-GRPVEKDKKGN------KIKGKVEH-HL 85
Query: 393 WXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKN 214
W +LV T+ P+EK +VYG LD+W AWE EFP +A AKAL ILRK+
Sbjct: 86 WKRRNSAQSGQKALTLVRTICELPNEKESVYGALDKWTAWETEFPLVAAAKALNILRKRG 145
Query: 213 LWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALF 34
W ++IQ+ KW+LSKGQ TMGTY+ ++LAFD + RIDEAE LW I H RSV + LF
Sbjct: 146 QWVRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRIDEAESLWNMIIHAHMRSVSKRLF 205
Query: 33 SRMISMYERNN 1
SRMIS+Y+ +N
Sbjct: 206 SRMISLYDHHN 216
>ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citrus clementina]
gi|557552197|gb|ESR62826.1| hypothetical protein
CICLE_v10016169mg [Citrus clementina]
Length = 284
Score = 154 bits (390), Expect = 5e-35
Identities = 83/189 (43%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Frame = -3
Query: 552 PATTTTCFQLRHSQPIQNSAHS----NAQSQKVVLHTKNNPSSRN-LRTKRQEDHRHLWX 388
P T + F L ++ ++ H N V ++ N S +N L K + +HLW
Sbjct: 21 PLQTPSGFSLLTTKLATSNPHLKCFLNQNKLPPVANSNANASKKNKLVVKVGKKEQHLWQ 80
Query: 387 XXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKNLW 208
+LV V P+EK AVYG LD+W AWE EFP IA AKAL+ILRK+ W
Sbjct: 81 KRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQW 140
Query: 207 TQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALFSR 28
++IQV KW+LSKGQ TMGTY+ ++LAFD + R DEAE LW I H+RS+ + LFSR
Sbjct: 141 LRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTHTRSISKRLFSR 200
Query: 27 MISMYERNN 1
MIS+Y+ ++
Sbjct: 201 MISLYDHHD 209
>ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Vitis vinifera]
Length = 216
Score = 154 bits (389), Expect = 6e-35
Identities = 77/154 (50%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
Frame = -3
Query: 450 NNPSSR----NLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEW 283
N PS R + K + HLW +LV V P+EK AVYG LD+W
Sbjct: 52 NPPSYRAVEKEISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKW 111
Query: 282 VAWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRI 103
AWE EFP IA AKAL+ILRK+N W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+
Sbjct: 112 TAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRV 171
Query: 102 DEAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
DEAE LW I H+RS+ + LFSRMIS+Y+ ++
Sbjct: 172 DEAESLWNMILHTHTRSISKQLFSRMISLYDHHD 205
>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 154 bits (389), Expect = 6e-35
Identities = 77/154 (50%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
Frame = -3
Query: 450 NNPSSR----NLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEW 283
N PS R + K + HLW +LV V P+EK AVYG LD+W
Sbjct: 52 NPPSYRAVEKEISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKW 111
Query: 282 VAWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRI 103
AWE EFP IA AKAL+ILRK+N W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+
Sbjct: 112 TAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRV 171
Query: 102 DEAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
DEAE LW I H+RS+ + LFSRMIS+Y+ ++
Sbjct: 172 DEAESLWNMILHTHTRSISKQLFSRMISLYDHHD 205
>gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 276
Score = 153 bits (386), Expect = 1e-34
Identities = 71/137 (51%), Positives = 95/137 (69%)
Frame = -3
Query: 411 EDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQ 232
++ HLW +LV + + P+EK AVYG LD+W AWE EFP IA AKAL+
Sbjct: 69 KNEHHLWKKRDSAGSGQKALNLVRIISQLPNEKEAVYGALDKWTAWETEFPLIAAAKALR 128
Query: 231 ILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRS 52
ILRK++ W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+DEAE LW I H+RS
Sbjct: 129 ILRKRSQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHIHTRS 188
Query: 51 VPRALFSRMISMYERNN 1
+ + LFSRMIS+Y+ +N
Sbjct: 189 ISKRLFSRMISLYDHHN 205
>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
gi|223533738|gb|EEF35472.1| conserved hypothetical
protein [Ricinus communis]
Length = 224
Score = 153 bits (386), Expect = 1e-34
Identities = 75/151 (49%), Positives = 98/151 (64%)
Frame = -3
Query: 453 KNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAW 274
+++ S + ++ +E+H HLW SLV V P EK VYG LD+W AW
Sbjct: 5 RDDKSRKPVKKAGKEEH-HLWKKRDSARSGEKALSLVRIVCELPDEKECVYGALDKWTAW 63
Query: 273 EDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEA 94
E EFP IAVAK L+ILRK N W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+DEA
Sbjct: 64 ETEFPLIAVAKGLRILRKHNQWLRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDNRVDEA 123
Query: 93 ELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
LW I H RS+ + LFSRMIS+Y+ +N
Sbjct: 124 ASLWNMILHTHVRSISKRLFSRMISLYDHHN 154
>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 270
Score = 152 bits (385), Expect = 2e-34
Identities = 74/148 (50%), Positives = 101/148 (68%)
Frame = -3
Query: 444 PSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDE 265
P R ++ +E H HLW +LV V + P+EK AVYG L++W+AWE E
Sbjct: 51 PERRVVKKVGKETH-HLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
Query: 264 FPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELL 85
FP IA AKAL+ILRK++ W ++IQV KW+LSKGQ TMGTY+ ++LAFD + R+DEAE L
Sbjct: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
Query: 84 WKRIFEKHSRSVPRALFSRMISMYERNN 1
W I H+RS+ + +FSRMIS+YE ++
Sbjct: 170 WNMILHTHTRSISKRVFSRMISLYEHHD 197
>gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus vulgaris]
Length = 289
Score = 152 bits (384), Expect = 2e-34
Identities = 73/142 (51%), Positives = 98/142 (69%)
Frame = -3
Query: 426 RTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAV 247
+T +++H HLW +LV V + P+EK AVYG LD+W+AWE EFP IA
Sbjct: 74 KTTGKKEH-HLWKSRDSAQSGQKALTLVRIVSKLPNEKEAVYGALDKWIAWETEFPVIAA 132
Query: 246 AKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFE 67
AKAL+ILRK+ W ++IQV KW+LSKGQ TMGT++ ++LAFD + R+DEAE LW I
Sbjct: 133 AKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTFDTLLLAFDMDQRVDEAESLWNMIIH 192
Query: 66 KHSRSVPRALFSRMISMYERNN 1
H RSV + LFSRMIS+Y+ ++
Sbjct: 193 THMRSVSKRLFSRMISIYDNHD 214
>ref|XP_002316747.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 152 bits (384), Expect = 2e-34
Identities = 77/176 (43%), Positives = 107/176 (60%)
Frame = -3
Query: 528 QLRHSQPIQNSAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXS 349
+L +P SA S+K + +R + K + HLW +
Sbjct: 26 RLTSLEPKVTSALCVKCSKKQLKLNSRADENRKVVKKSGKKEHHLWQKRDSAGSGQKALN 85
Query: 348 LVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSK 169
LV V P+EK AVYG LD+W AWE EFP IA AKAL+IL+++ WT++IQV KW+LSK
Sbjct: 86 LVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALKILQQRRQWTRVIQVAKWMLSK 145
Query: 168 GQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALFSRMISMYERNN 1
GQ T+GTY+ ++LAFD + R+DEA+ LW I H+RS+ + LFSRMIS+Y+ +N
Sbjct: 146 GQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSKRLFSRMISLYDHHN 201
>ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658716|gb|AEE84116.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 260
Score = 150 bits (380), Expect = 7e-34
Identities = 72/147 (48%), Positives = 102/147 (69%)
Frame = -3
Query: 441 SSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEF 262
+S+ ++ +++H HLW +LV + P+EK AVYG L++WVAWE EF
Sbjct: 44 NSKEIKKVGKKEH-HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEF 102
Query: 261 PTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLW 82
P IA AKALQILRK++ W ++IQ+ KW+LSKGQ TMGTY++++LAFD + R DEAE LW
Sbjct: 103 PIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLW 162
Query: 81 KRIFEKHSRSVPRALFSRMISMYERNN 1
I H+RS+PR LF+RMI++Y ++
Sbjct: 163 NMILHTHTRSIPRRLFARMIALYAHHD 189
>ref|NP_567571.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|186512032|ref|NP_001119009.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|334186688|ref|NP_001190768.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|223635632|sp|Q2V3H0.2|PP322_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18975, chloroplastic; Flags: Precursor
gi|332658715|gb|AEE84115.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658717|gb|AEE84117.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658718|gb|AEE84118.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 287
Score = 150 bits (380), Expect = 7e-34
Identities = 72/147 (48%), Positives = 102/147 (69%)
Frame = -3
Query: 441 SSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEF 262
+S+ ++ +++H HLW +LV + P+EK AVYG L++WVAWE EF
Sbjct: 71 NSKEIKKVGKKEH-HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEF 129
Query: 261 PTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLW 82
P IA AKALQILRK++ W ++IQ+ KW+LSKGQ TMGTY++++LAFD + R DEAE LW
Sbjct: 130 PIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLW 189
Query: 81 KRIFEKHSRSVPRALFSRMISMYERNN 1
I H+RS+PR LF+RMI++Y ++
Sbjct: 190 NMILHTHTRSIPRRLFARMIALYAHHD 216
>emb|CAA16754.1| putative protein [Arabidopsis thaliana] gi|7268691|emb|CAB78899.1|
putative protein [Arabidopsis thaliana]
Length = 626
Score = 150 bits (380), Expect = 7e-34
Identities = 72/147 (48%), Positives = 102/147 (69%)
Frame = -3
Query: 441 SSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEF 262
+S+ ++ +++H HLW +LV + P+EK AVYG L++WVAWE EF
Sbjct: 44 NSKEIKKVGKKEH-HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEF 102
Query: 261 PTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLW 82
P IA AKALQILRK++ W ++IQ+ KW+LSKGQ TMGTY++++LAFD + R DEAE LW
Sbjct: 103 PIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLW 162
Query: 81 KRIFEKHSRSVPRALFSRMISMYERNN 1
I H+RS+PR LF+RMI++Y ++
Sbjct: 163 NMILHTHTRSIPRRLFARMIALYAHHD 189
>ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata] gi|297313803|gb|EFH44226.1| hypothetical protein
ARALYDRAFT_914772 [Arabidopsis lyrata subsp. lyrata]
Length = 284
Score = 150 bits (379), Expect = 9e-34
Identities = 78/162 (48%), Positives = 106/162 (65%)
Frame = -3
Query: 498 SAHSNAQSQKVVLHTKNNPSSRNLRTKRQEDHRHLWXXXXXXXXXXXXXSLVDTVLRTPS 319
S S Q+ K+ + T N S ++ +++H HLW +LV + P+
Sbjct: 52 SKFSEKQAGKLDVATVN---SNEIKKVGKKEH-HLWKKNDSAGSGQKALNLVRMLSGLPN 107
Query: 318 EKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKNLWTQIIQVGKWLLSKGQSMTMGTYE 139
EK AVYG L++WVAWE EFP IA AKALQILRK++ W ++IQ+ KW+LSKGQ TMGTY+
Sbjct: 108 EKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYD 167
Query: 138 LMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALFSRMISMY 13
++LAFD + R DEAE LW I H+RS+PR LF+RMI++Y
Sbjct: 168 TLLLAFDMDQRADEAESLWNMILHTHTRSIPRRLFARMIALY 209
>ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Citrus sinensis]
Length = 281
Score = 149 bits (377), Expect = 1e-33
Identities = 82/189 (43%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Frame = -3
Query: 552 PATTTTCFQLRHSQPIQNSAHS----NAQSQKVVLHTKNNPSSRN-LRTKRQEDHRHLWX 388
P T + F L ++ ++ H N Q V ++ N S +N L K + +HLW
Sbjct: 21 PLQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQ 80
Query: 387 XXXXXXXXXXXXSLVDTVLRTPSEKGAVYGILDEWVAWEDEFPTIAVAKALQILRKKNLW 208
+LV + P+EK AVYG LD+W AWE EFP IA AKAL+ILRK+ W
Sbjct: 81 KRDSAGSGQKALNLVSEL---PNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQW 137
Query: 207 TQIIQVGKWLLSKGQSMTMGTYELMILAFDNNGRIDEAELLWKRIFEKHSRSVPRALFSR 28
++IQV KW+LSKGQ TMGTY+ ++LAFD + R DEAE LW I +RS+ + LFSR
Sbjct: 138 LRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR 197
Query: 27 MISMYERNN 1
MIS+Y+ ++
Sbjct: 198 MISLYDHHD 206