BLASTX nr result
ID: Ephedra28_contig00008981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00008981
(753 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001772803.1| predicted protein [Physcomitrella patens] gi... 98 3e-18
gb|EXB63612.1| hypothetical protein L484_026953 [Morus notabilis] 92 2e-16
gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theob... 91 4e-16
ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer ... 91 4e-16
gb|AAO00844.1| Unknown protein [Arabidopsis thaliana] 91 4e-16
gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana] 91 4e-16
ref|NP_849735.1| toprim domain-containing protein [Arabidopsis t... 91 4e-16
ref|XP_003534794.2| PREDICTED: twinkle homolog protein, chloropl... 91 5e-16
ref|XP_006468363.1| PREDICTED: twinkle homolog protein, chloropl... 91 5e-16
ref|XP_006448835.1| hypothetical protein CICLE_v10014667mg [Citr... 91 5e-16
ref|XP_002299018.1| toprim domain-containing family protein [Pop... 90 7e-16
ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloropl... 90 9e-16
ref|XP_004231556.1| PREDICTED: uncharacterized protein LOC101264... 90 9e-16
ref|XP_002890887.1| toprim domain-containing protein [Arabidopsi... 90 9e-16
ref|XP_003546288.2| PREDICTED: twinkle homolog protein, chloropl... 89 1e-15
gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus... 89 1e-15
ref|XP_004158064.1| PREDICTED: twinkle protein, mitochondrial-li... 89 1e-15
ref|XP_004135743.1| PREDICTED: uncharacterized protein LOC101219... 89 1e-15
ref|XP_006415437.1| hypothetical protein EUTSA_v10006950mg [Eutr... 89 2e-15
ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257... 89 2e-15
>ref|XP_001772803.1| predicted protein [Physcomitrella patens]
gi|162675880|gb|EDQ62370.1| predicted protein
[Physcomitrella patens]
Length = 630
Score = 97.8 bits (242), Expect = 3e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +1
Query: 4 IYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRVT 183
+YDISGSAHFINKCDN IV+HRN ET P DQ+++ VRKVRNK AG IG L YNRVT
Sbjct: 563 LYDISGSAHFINKCDNGIVIHRNRDETAGPLDQVKVLVRKVRNKAAGTIGEATLRYNRVT 622
Query: 184 GTYEDI 201
G YED+
Sbjct: 623 GDYEDV 628
>gb|EXB63612.1| hypothetical protein L484_026953 [Morus notabilis]
Length = 705
Score = 91.7 bits (226), Expect = 2e-16
Identities = 47/67 (70%), Positives = 51/67 (76%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IVVHRN P DQ+QI VRKVRNKVAG IG L Y+RV
Sbjct: 638 NLYDISGSAHFINKCDNGIVVHRNRDPDAGPVDQVQIIVRKVRNKVAGTIGEAYLAYDRV 697
Query: 181 TGTYEDI 201
TG Y DI
Sbjct: 698 TGRYIDI 704
>gb|EOY25653.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
Length = 705
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ VRKVRNKV G IG L Y+RV
Sbjct: 632 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKVRNKVVGTIGDAFLSYDRV 691
Query: 181 TGTYEDI 201
TG Y DI
Sbjct: 692 TGVYTDI 698
>ref|XP_004512933.1| PREDICTED: DNA primase/helicase-like [Cicer arietinum]
Length = 697
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ +RKVRNKVAG IG L YNRV
Sbjct: 627 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCIRKVRNKVAGTIGEAVLLYNRV 686
Query: 181 TGTYED 198
TG Y D
Sbjct: 687 TGEYVD 692
>gb|AAO00844.1| Unknown protein [Arabidopsis thaliana]
Length = 709
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN I+VHRN E P D +QI VRKVRNKVAG+IG L Y+R
Sbjct: 628 NLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRT 687
Query: 181 TGTYED 198
TG+Y D
Sbjct: 688 TGSYSD 693
>gb|AAD25755.1|AC007060_13 T5I8.13 [Arabidopsis thaliana]
Length = 670
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN I+VHRN E P D +QI VRKVRNKVAG+IG L Y+R
Sbjct: 589 NLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRT 648
Query: 181 TGTYED 198
TG+Y D
Sbjct: 649 TGSYSD 654
>ref|NP_849735.1| toprim domain-containing protein [Arabidopsis thaliana]
gi|487522982|sp|B5X582.1|TWIH_ARATH RecName:
Full=Twinkle homolog protein,
chloroplastic/mitochondrial; AltName: Full=DNA helicase;
AltName: Full=DNA primase; Flags: Precursor
gi|209529811|gb|ACI49800.1| At1g30680 [Arabidopsis
thaliana] gi|332193138|gb|AEE31259.1| toprim
domain-containing protein [Arabidopsis thaliana]
Length = 709
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN I+VHRN E P D +QI VRKVRNKVAG+IG L Y+R
Sbjct: 628 NLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRT 687
Query: 181 TGTYED 198
TG+Y D
Sbjct: 688 TGSYSD 693
>ref|XP_003534794.2| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Glycine max]
Length = 700
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ VRKVRNKVAG IG L YNRV
Sbjct: 624 NLYDISGSAHFINKCDNGIVIHRNRDPESGPIDQVQVCVRKVRNKVAGTIGEAMLLYNRV 683
Query: 181 TGTY 192
TG Y
Sbjct: 684 TGEY 687
>ref|XP_006468363.1| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 709
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P D++Q+ VRKVRNKV G IG L YNRV
Sbjct: 642 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPIDRVQVCVRKVRNKVVGTIGEAFLSYNRV 701
Query: 181 TGTYEDI 201
TG Y DI
Sbjct: 702 TGEYMDI 708
>ref|XP_006448835.1| hypothetical protein CICLE_v10014667mg [Citrus clementina]
gi|557551446|gb|ESR62075.1| hypothetical protein
CICLE_v10014667mg [Citrus clementina]
Length = 599
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P D++Q+ VRKVRNKV G IG L YNRV
Sbjct: 532 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPIDRVQVCVRKVRNKVVGTIGEAFLSYNRV 591
Query: 181 TGTYEDI 201
TG Y DI
Sbjct: 592 TGEYMDI 598
>ref|XP_002299018.1| toprim domain-containing family protein [Populus trichocarpa]
gi|222846276|gb|EEE83823.1| toprim domain-containing
family protein [Populus trichocarpa]
Length = 658
Score = 90.1 bits (222), Expect = 7e-16
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHF+NKCDN IV+HRN P DQ+Q+ VRKVRNKVAG IG L YNRV
Sbjct: 576 NLYDISGSAHFVNKCDNGIVIHRNRNPNAGPIDQVQVLVRKVRNKVAGTIGDAFLSYNRV 635
Query: 181 TGTYEDI 201
TG + ++
Sbjct: 636 TGEFMNV 642
>ref|XP_006360317.1| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 695
Score = 89.7 bits (221), Expect = 9e-16
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN + P DQ+Q+ VRKVRNKV+G IG L Y+RV
Sbjct: 622 NLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRV 681
Query: 181 TGTYEDI 201
TG + DI
Sbjct: 682 TGEFMDI 688
>ref|XP_004231556.1| PREDICTED: uncharacterized protein LOC101264268 [Solanum
lycopersicum]
Length = 697
Score = 89.7 bits (221), Expect = 9e-16
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN + P DQ+Q+ VRKVRNKV+G IG L Y+RV
Sbjct: 624 NLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRV 683
Query: 181 TGTYEDI 201
TG + DI
Sbjct: 684 TGEFMDI 690
>ref|XP_002890887.1| toprim domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297336729|gb|EFH67146.1| toprim domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 774
Score = 89.7 bits (221), Expect = 9e-16
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN I+VHRN E P D +QI VRKVRNKVAG+IG L Y+R
Sbjct: 693 NLYDISGSAHFINKCDNGIIVHRNRDEKAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRA 752
Query: 181 TGTYED 198
TG Y D
Sbjct: 753 TGLYSD 758
>ref|XP_003546288.2| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Glycine max]
Length = 698
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ VRKVRNKVAG IG L YNRV
Sbjct: 622 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPIDQVQVCVRKVRNKVAGTIGEAILLYNRV 681
Query: 181 TGTY 192
TG Y
Sbjct: 682 TGEY 685
>gb|ESW19430.1| hypothetical protein PHAVU_006G124400g [Phaseolus vulgaris]
Length = 697
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ VRKVRNKVAG IG L YNRV
Sbjct: 622 NLYDISGSAHFINKCDNGIVIHRNRDPEAGPIDQVQVCVRKVRNKVAGTIGEAILLYNRV 681
Query: 181 TGTY 192
TG Y
Sbjct: 682 TGEY 685
>ref|XP_004158064.1| PREDICTED: twinkle protein, mitochondrial-like [Cucumis sativus]
Length = 679
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P D +Q+ VRKVRNKVAG IG L YNRV
Sbjct: 602 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRV 661
Query: 181 TGTYEDIA 204
TG + D A
Sbjct: 662 TGEFLDAA 669
>ref|XP_004135743.1| PREDICTED: uncharacterized protein LOC101219062 [Cucumis sativus]
Length = 512
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P D +Q+ VRKVRNKVAG IG L YNRV
Sbjct: 435 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRV 494
Query: 181 TGTYEDIA 204
TG + D A
Sbjct: 495 TGEFLDAA 502
>ref|XP_006415437.1| hypothetical protein EUTSA_v10006950mg [Eutrema salsugineum]
gi|557093208|gb|ESQ33790.1| hypothetical protein
EUTSA_v10006950mg [Eutrema salsugineum]
Length = 708
Score = 89.0 bits (219), Expect = 2e-15
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN E P D +QI VRKVRNKVAG+IG L Y+R
Sbjct: 627 NLYDISGSAHFINKCDNGIVIHRNRDENAGPLDLVQICVRKVRNKVAGQIGDAYLSYDRA 686
Query: 181 TGTYED 198
TG + D
Sbjct: 687 TGLFSD 692
>ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257655 [Vitis vinifera]
gi|297740887|emb|CBI31069.3| unnamed protein product
[Vitis vinifera]
Length = 705
Score = 89.0 bits (219), Expect = 2e-15
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = +1
Query: 1 SIYDISGSAHFINKCDNMIVVHRNLLETDRPSDQIQIHVRKVRNKVAGKIGSTGLHYNRV 180
++YDISGSAHFINKCDN IV+HRN P DQ+Q+ VRKVRNKV G IG L Y+R+
Sbjct: 633 NMYDISGSAHFINKCDNGIVIHRNRNPEAGPVDQVQVCVRKVRNKVVGTIGDAFLSYDRI 692
Query: 181 TGTYEDI 201
+G Y DI
Sbjct: 693 SGVYTDI 699