BLASTX nr result

ID: Ephedra28_contig00008884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00008884
         (355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39879.1| unknown [Picea sitchensis]                              61   2e-07
gb|EXB32787.1| Zinc finger CCCH domain-containing protein 30 [Mo...    57   2e-06
gb|ADL36655.1| C3HL domain class transcription factor [Malus dom...    55   7e-06

>gb|ACN39879.1| unknown [Picea sitchensis]
          Length = 768

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
 Frame = +1

Query: 145 MCGGPERLKA-----NGDAVFVLNNDKSRFGKGDNIASPKHCSPLLELAANDDVKSFKKA 309
           MCGGPE LK       GD V +  N   +  +       + CS L ELAAN+D+  FKKA
Sbjct: 1   MCGGPEHLKPASPHEEGDKVKMAENQAIKVKE-----ISESCSSLHELAANNDLIGFKKA 55

Query: 310 VEEDGFAIDEISFWY 354
           +EE+G  IDE++FWY
Sbjct: 56  MEEEGSKIDEVNFWY 70


>gb|EXB32787.1| Zinc finger CCCH domain-containing protein 30 [Morus notabilis]
          Length = 755

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = +1

Query: 145 MCGGPERLKANGDAVFVLNNDKSRFGKGDNIASPKHCSPLLELAANDDVKSFKKAVEEDG 324
           MCGGPER K+      V     ++      + + +  S LLELA+N+DV+ FK++++ D 
Sbjct: 1   MCGGPERSKSTSTPSTVETESSAKDMSNGTLKADESFSSLLELASNNDVEGFKRSIDRDA 60

Query: 325 FAIDEISFWY 354
            +I+EI+ WY
Sbjct: 61  SSINEIALWY 70


>gb|ADL36655.1| C3HL domain class transcription factor [Malus domestica]
          Length = 736

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
 Frame = +1

Query: 145 MCGGPERLKANGD-AVFVLNNDKSRFGKGD----NIASPKHCSPLLELAANDDVKSFKKA 309
           MC G +++K N   A  +++ D+SR          + +    + LLELAAN+D++SFK++
Sbjct: 1   MCNGSDQIKLNSSPAASLISVDESRLSNTAMNHLTVETEDAFASLLELAANNDIESFKRS 60

Query: 310 VEEDGFAIDEISFWY 354
           +E+D  AIDEI  WY
Sbjct: 61  IEQDPSAIDEIGLWY 75


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