BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00008871
         (1394 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16456.1| unknown [Picea sitchensis]                             321   5e-85
gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo...   294   7e-77
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo...   294   7e-77
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|...   284   7e-74
gb|EPS66077.1| hypothetical protein M569_08698, partial [Genlise...   281   5e-73
ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [A...   280   1e-72
gb|AFW79512.1| DNA-binding protein [Zea mays]                         280   1e-72
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...   279   2e-72
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi...   278   4e-72
gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]     278   5e-72
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu...   277   7e-72
ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Popu...   277   7e-72
gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]      276   1e-71
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr...   276   1e-71
ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Caps...   276   2e-71
ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containi...   276   2e-71
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs...   275   3e-71
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi...   274   7e-71
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab...   274   7e-71
ref|XP_004967670.1| PREDICTED: pentatricopeptide repeat-containi...   273   1e-70

>gb|ABR16456.1| unknown [Picea sitchensis]
          Length = 600

 Score =  321 bits (822), Expect = 5e-85
 Identities = 180/460 (39%), Positives = 273/460 (59%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            L +  L+ KF ++ SSL++WL  GNV+T+ E +     LR+RRM+ R L VS WL  KK 
Sbjct: 134  LYQTVLSCKFIDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKP 193

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
                   YA+ LD +    G  + E +  S+PS M+G   Y TLL NY++  N+ +AEE+
Sbjct: 194  FKKTERDYASRLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEI 253

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F+ M A    L   +YN +LLLY    ++KI   LK ME   +KP  +TY+ILI  KG +
Sbjct: 254  FKKMKAEGFSLTAFEYNQLLLLYKRLDKKKIQDVLKMMEDEGVKPTIFTYKILIDVKGWM 313

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
            GDI GM                  L ++A+  +++ + EKA  +L ELE +   +K    
Sbjct: 314  GDIGGMEQVAENMKSEDIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDK---- 369

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
             R  ++ LL  YA L + T+VER WK  E    + L +YA G+  WG+LG+I+KAE  F+
Sbjct: 370  -RSRLKMLLPLYAELGKPTEVERIWKDFEAFPALRLDEYATGVVAWGKLGQIEKAEITFE 428

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
             +L     LSAKHY ALL+VY +H LL K K+LV++M+ +G  ++ PI  +LI+L+V  G
Sbjct: 429  KLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAG 488

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKA+ +L        ++P Y ++V++L+KYAE GDV++AE+IFD+MRQ GY      +
Sbjct: 489  ELEKADSILFKACNQKQLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAF 548

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            +SLL +Y  A+VPA+  +  M+ D+   +  +  L+E++D
Sbjct: 549  ASLLKSYANARVPAYGFRERMKADKIYLNGRLNSLMEQVD 588


>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
            [Theobroma cacao]
          Length = 621

 Score =  294 bits (752), Expect = 7e-77
 Identities = 162/444 (36%), Positives = 250/444 (56%)
 Frame = +2

Query: 53   LDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDCVF 232
            LD+WLE+G    ++E   A+  LR RRMY RAL +S WL   K +DF    YA+ LD + 
Sbjct: 173  LDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQLSEWLEANKQLDFTERDYASRLDLIA 232

Query: 233  NAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTADY 412
               G  +AE +++ +P   +G ++YRTLL N     N+ +AEE+F  M  +   + +   
Sbjct: 233  KVRGLLKAEMYIEKIPKSFRGEVIYRTLLANCVVANNVKKAEEVFNKMRDLELPITSFSC 292

Query: 413  NLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXXXX 592
            N +LLLY    ++KI   L  ME   +KP  +TY+ILI TKG   DI GM          
Sbjct: 293  NQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGLSNDITGMDQIVETMKAE 352

Query: 593  XXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYALLN 772
                     +I+AK  V   +TEKA E+L  +E       +    R   R LL  YA L 
Sbjct: 353  GVEPDIHTQSILAKHYVSGGLTEKAVEVLKGMEG-----DNIKENRWACRFLLPLYADLG 407

Query: 773  RETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQSMLERHHILSAKHYKA 952
            +  +VER WK  E++  +   +Y   I  WG+L KI++AE +F+ ML+    L A++Y +
Sbjct: 408  KAVEVERVWKVCESNPRLE--EYMAAIEAWGKLNKIEEAEAVFEMMLKTWKKLPARYYAS 465

Query: 953  LLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDDYGHM 1132
            LL VY NHK+L K KDLV++M   G ++      +L+KLYV  G++EKA+ +L       
Sbjct: 466  LLKVYSNHKMLQKGKDLVKRMADDGCQIGPLTWDALVKLYVEAGEVEKADSILQKACQQN 525

Query: 1133 TVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKVPAHK 1312
             VKP + S ++V+++Y++ GD+ ++E++F +MRQ GY  + + + SL+ AYV AK PA+ 
Sbjct: 526  QVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQSLVQAYVNAKAPAYG 585

Query: 1313 LKHAMREDRFIPSKAMVQLIEKLD 1384
            ++  M+ D   P+KA+   + ++D
Sbjct: 586  IRERMKADNIFPNKALATQLAQVD 609


>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
            cacao]
          Length = 623

 Score =  294 bits (752), Expect = 7e-77
 Identities = 162/444 (36%), Positives = 250/444 (56%)
 Frame = +2

Query: 53   LDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDCVF 232
            LD+WLE+G    ++E   A+  LR RRMY RAL +S WL   K +DF    YA+ LD + 
Sbjct: 175  LDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQLSEWLEANKQLDFTERDYASRLDLIA 234

Query: 233  NAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTADY 412
               G  +AE +++ +P   +G ++YRTLL N     N+ +AEE+F  M  +   + +   
Sbjct: 235  KVRGLLKAEMYIEKIPKSFRGEVIYRTLLANCVVANNVKKAEEVFNKMRDLELPITSFSC 294

Query: 413  NLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXXXX 592
            N +LLLY    ++KI   L  ME   +KP  +TY+ILI TKG   DI GM          
Sbjct: 295  NQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGLSNDITGMDQIVETMKAE 354

Query: 593  XXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYALLN 772
                     +I+AK  V   +TEKA E+L  +E       +    R   R LL  YA L 
Sbjct: 355  GVEPDIHTQSILAKHYVSGGLTEKAVEVLKGMEG-----DNIKENRWACRFLLPLYADLG 409

Query: 773  RETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQSMLERHHILSAKHYKA 952
            +  +VER WK  E++  +   +Y   I  WG+L KI++AE +F+ ML+    L A++Y +
Sbjct: 410  KAVEVERVWKVCESNPRLE--EYMAAIEAWGKLNKIEEAEAVFEMMLKTWKKLPARYYAS 467

Query: 953  LLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDDYGHM 1132
            LL VY NHK+L K KDLV++M   G ++      +L+KLYV  G++EKA+ +L       
Sbjct: 468  LLKVYSNHKMLQKGKDLVKRMADDGCQIGPLTWDALVKLYVEAGEVEKADSILQKACQQN 527

Query: 1133 TVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKVPAHK 1312
             VKP + S ++V+++Y++ GD+ ++E++F +MRQ GY  + + + SL+ AYV AK PA+ 
Sbjct: 528  QVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQSLVQAYVNAKAPAYG 587

Query: 1313 LKHAMREDRFIPSKAMVQLIEKLD 1384
            ++  M+ D   P+KA+   + ++D
Sbjct: 588  IRERMKADNIFPNKALATQLAQVD 611


>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
            DNA-binding protein [Zea mays]
          Length = 622

 Score =  284 bits (726), Expect = 7e-74
 Identities = 161/460 (35%), Positives = 247/460 (53%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL+  L +   ++ S+L++W + GN   + E    L  LR R  Y +AL +  W+   +L
Sbjct: 157  LLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQL 216

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
             +F    YAAHLD     +G  +AE  ++ +P+  +G IVYRTLL N  +  NI ++E++
Sbjct: 217  FEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQV 276

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   +    +N +LLLY    R+KI   L  ME   +KP  +TY+IL+  KG++
Sbjct: 277  FNRMKDLGFPVTQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSV 336

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
            GDI  M                   A IA+  +     EKA  LL  +E       D   
Sbjct: 337  GDIEAMEKVIESMEKDSIEPDLTFNATIARHYIFYGQREKAEALLKAME-----GDDIQK 391

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
             R   + LL  +A L     VER WK  E  D+  + +    I  +G+LG ++KAE++F+
Sbjct: 392  NRAACKTLLPLHAFLGNSDAVERIWKACE--DNTRVAESVSAIEAFGKLGDVEKAEKVFE 449

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
             ML     LS+K Y ALL VY +H LL K K+L ++M ++ +R   P   +L+KLYV  G
Sbjct: 450  DMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAG 509

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKAE ++        +KP Y + +++L  Y++ GDV ++E++F+K+RQ GY  + +MY
Sbjct: 510  EVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMY 569

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
             SLLHAYV AK PA+  +  M+ D   P+ A+  LI   D
Sbjct: 570  QSLLHAYVHAKAPAYGFRERMKADNIFPNSAVSTLIAATD 609


>gb|EPS66077.1| hypothetical protein M569_08698, partial [Genlisea aurea]
          Length = 538

 Score =  281 bits (719), Expect = 5e-73
 Identities = 169/448 (37%), Positives = 248/448 (55%), Gaps = 2/448 (0%)
 Frame = +2

Query: 47   SSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDC 226
            S+LD+W+E GN +TKS+    +  LR RRM+ +AL ++ WL +KK ++     YA+HLD 
Sbjct: 87   SALDKWVEDGNEITKSDVALTMLYLRRRRMFIKALQLTEWLESKKHLEMSETNYASHLDF 146

Query: 227  VFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTA 406
            V    G ++AE +++ +P    G +VYRT L N     N+ +AEE+F  M  +   +   
Sbjct: 147  VAKVCGINKAEEYMKRIPESFMGEVVYRTFLANCVASTNVKKAEEIFNKMRGLDVPISCF 206

Query: 407  DYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXX 586
              N MLLL     ++KI   L  ME   +KP  +TY+ILI  KG   DI GM        
Sbjct: 207  SCNQMLLLCKRTDKKKIADVLLLMEKEQVKPSLFTYQILIDVKGQSKDINGMEQIFETMK 266

Query: 587  XXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYAL 766
                     I A +A+    S   +KA ++L ELE   DL+K+ ++ R+    LL  YA 
Sbjct: 267  AEGINPSTEIRASLARHYANSGFKDKAEKILKELEG-DDLKKNRWACRL----LLPIYAS 321

Query: 767  LNRETDVERHWKKIENDDDIPLLDYAV-GIRIWGQLGKIDKAEQIFQSMLER-HHILSAK 940
            L R+ +V R W+  E+D   P L+  V  I  WGQL KI+ +E  F+ +L++     SAK
Sbjct: 322  LGRDDEVGRIWEVCESD---PRLEECVAAIEAWGQLNKIENSEAAFEEVLKKVKRKPSAK 378

Query: 941  HYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDD 1120
            H+  LL VY NHK+L+K KDLV++M   G  +       L+KLYVG G++EKA+ +L   
Sbjct: 379  HFNVLLKVYANHKMLTKGKDLVKRMADLGCSIGPMTWDGLVKLYVGAGEVEKADSILERA 438

Query: 1121 YGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKV 1300
                T +P + S + +L KY + GD+ +AE+I+  M+Q GY  K + Y SLL AYV AKV
Sbjct: 439  IKQKTGRPLFSSFLLILDKYGQRGDIHNAEKIYLMMKQAGYPVKLRQYQSLLQAYVNAKV 498

Query: 1301 PAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            PA+     MR D   P+K +   + + D
Sbjct: 499  PAYGFVDRMRGDNLFPNKLVAAQLAQAD 526


>ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [Amborella trichopoda]
            gi|548837326|gb|ERM98104.1| hypothetical protein
            AMTR_s00095p00019470 [Amborella trichopoda]
          Length = 637

 Score =  280 bits (716), Expect = 1e-72
 Identities = 155/471 (32%), Positives = 254/471 (53%), Gaps = 11/471 (2%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            L ++ LN++ + I S++D+W+  GNVV +     A+  LR RRM+ RAL +S WL   K 
Sbjct: 163  LFKVILNAQHQSIHSAIDKWVADGNVVNREGVWGAMFNLRKRRMFARALQLSDWLDANKP 222

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
             +F+   Y + +D +   HG  +AE +++ LP  ++G ++YRTLL N +  RN+ +AEE+
Sbjct: 223  FEFNERDYQSRVDLIAKVHGIHRAEKYIEKLPQPVRGEVLYRTLLANCSTTRNVKKAEEV 282

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +  K+    Y+ ++L+Y    ++KI   L  ME   +KP ++TY +L+  KG  
Sbjct: 283  FNKMKDLGFKMTAFSYDQLILIYKRIDKKKIADVLLMMEKDNVKPSSFTYMLLVDVKGRS 342

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DI GM                   A +AK  +     +KA  +L +LE      +D   
Sbjct: 343  SDIEGMEQIITSMKSEGLVPDIPFQATVAKYYIFGGFIDKAEAVLKDLE-----GEDMER 397

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAV-GIRIWGQLGKIDKAEQIF 901
             R   + LL  YA L +  +V R WK +E     P  D  +  I  WG+LG  +KAE +F
Sbjct: 398  NRDACKALLPLYAALGKADEVSRIWKVVEPS---PRFDECLAAIEAWGKLGDTEKAEAVF 454

Query: 902  QSMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGL 1081
            + ML+    +S+++Y AL+ VY  HK L+K KDLV++M  +GI +      +L++LYV  
Sbjct: 455  ERMLKTWKNISSRYYSALIKVYTTHKQLNKGKDLVKRMADNGITIGPVTWDALVRLYVEA 514

Query: 1082 GDMEKAEFMLSDDYGHMT----------VKPCYLSIVSVLKKYAETGDVSSAERIFDKMR 1231
            G++EKA+ +L+                 +KP Y S + +++KY E GD+ +AE+IF +++
Sbjct: 515  GEVEKADSILAKAAAQQNNSTSQSSKNRLKPLYSSYMVIMEKYCERGDIHNAEKIFHRLK 574

Query: 1232 QMGYKRKFKMYSSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            Q GY+ +   Y +LL  YV A  PA+  +  ++ D   P++ M  ++ K D
Sbjct: 575  QAGYEGRMSDYQTLLQTYVNANTPAYGFRERLKADNVFPNRFMASMLTKAD 625


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score =  280 bits (716), Expect = 1e-72
 Identities = 159/460 (34%), Positives = 245/460 (53%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL+  L +   ++ S+L++W + GN   + E    L  LR R  Y +AL +  W+   +L
Sbjct: 157  LLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQL 216

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
             +F    YAAHLD     +G  +AE  ++ +P+  +G IVYRTLL N  +  NI ++E++
Sbjct: 217  FEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQV 276

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   +    +N +LLLY    R+KI   L  ME   +KP  +TY+IL+  KG++
Sbjct: 277  FNRMKDLGFPVTQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSV 336

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
            GDI  M                   A IA+  +     EKA  LL  +E       D   
Sbjct: 337  GDIEAMEKVIESMEKDSIEPDLTFNATIARHYIFYGQREKAEALLKAME-----GDDIQK 391

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
             R   + LL  +A L     VER WK  E  D+  + +    I  +G+LG ++KAE++F+
Sbjct: 392  NRAACKTLLPLHAFLGNSDAVERIWKACE--DNTRVAESVSAIEAFGKLGDVEKAEKVFE 449

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
             ML     LS+K Y ALL VY +H LL K K+L ++M ++ +R   P   +L+KLYV  G
Sbjct: 450  DMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAG 509

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKAE ++        +KP Y + +++L  Y++ GDV ++E++F+K+RQ GY  + +MY
Sbjct: 510  EVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMY 569

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
              LLHAYV AK PA+  +  M+ D   P+  +  LI   D
Sbjct: 570  QVLLHAYVRAKAPAYGFRERMKADNIFPNSVVSTLIAATD 609


>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score =  279 bits (714), Expect = 2e-72
 Identities = 156/460 (33%), Positives = 248/460 (53%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL++ L + + ++  +L +W+  GN V +S+   A+  LR RR + +AL +  WL   KL
Sbjct: 148  LLKVMLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKL 207

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
            I+     YA+ LD +   HG  +AE F+ ++P+ ++G IVYRTLL N     N+ +AEE+
Sbjct: 208  IELVERDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEV 267

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   +     N +LLLY    ++KI   L  ME   +KP  +TY++L+ TKG  
Sbjct: 268  FNKMKDLGFPVTVFAINQLLLLYKRVDKKKISDVLTMMEKEDVKPSLFTYKLLVDTKGAS 327

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DI GM                 + A IAK  +     EKA  +L  +E       D   
Sbjct: 328  RDIEGMEKVVQSMEAEGITPDLLLQATIAKHYIFGGHREKAEAILESMEG------DMKE 381

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
             R   + ++  YA L ++ DVER WK  +++  +   +    I  +G+LG ++KAE++F 
Sbjct: 382  NRNACKMVMPLYAFLGKKDDVERIWKVCQSNTRLD--ECLSAIEAFGRLGDVEKAEEVFG 439

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
            +M +    LS+K+Y A++ VY N  L+ K K+L ++M + G RL      SL+KLYV  G
Sbjct: 440  NMFKTWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAG 499

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKAE +L        +KP Y S + +L  Y++ GDV ++E++F K+RQMGY  + + Y
Sbjct: 500  EVEKAESLLHKLSVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQY 559

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
              LLHAY+ AK P +  +  M+ D   P+  +  L+   D
Sbjct: 560  QLLLHAYLHAKAPVYGFRERMKADNIFPNSVIASLLAATD 599


>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Citrus sinensis]
          Length = 623

 Score =  278 bits (711), Expect = 4e-72
 Identities = 162/447 (36%), Positives = 249/447 (55%), Gaps = 1/447 (0%)
 Frame = +2

Query: 47   SSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDC 226
            S+L  ++E+GN ++++E   A+  LR+RRMY +AL  S WL T K +DF    YA+ LD 
Sbjct: 173  STLTTYVEEGNDLSRAEISLAMANLRTRRMYGKALQFSEWLETNKKLDFIERDYASRLDL 232

Query: 227  VFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTA 406
            +    G  +AES++Q +P   +G +VYRTLL +     N+ +AEE+F  M      + + 
Sbjct: 233  IAKLRGLQKAESYIQKIPESFRGEVVYRTLLASCVAGNNVKKAEEVFNRMKDKGFPVTSF 292

Query: 407  DYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXX 586
              N +L+LY    ++K+   L  ME   +K   ++Y+ILI  KG   D+ GM        
Sbjct: 293  ACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGRSNDLTGMDQVVEAMK 352

Query: 587  XXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYAL 766
                      LAI+AK  V     EKA  +L E+E       +    R   R LL  YA 
Sbjct: 353  SEGIEPDSGTLAILAKHYVSGGRKEKAEAILKEMEG-----DNLKEHRWTCRLLLPLYAE 407

Query: 767  LNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIFQSMLERHHILSAKH 943
            L +   V R WK  E++   P LD  +  I  WG+L K+++AE +F+ M +    LS KH
Sbjct: 408  LGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKKMSKTWKKLSTKH 464

Query: 944  YKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDDY 1123
            Y ALL VY +HK+LSK KDLV++M +SG  +      +L+KL+V  G++EKA+ +L    
Sbjct: 465  YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 524

Query: 1124 GHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKVP 1303
                 KP + S + ++ +YA+ GD+ S E+IF +MRQ+GY  +FK + +L+ AY+ AK P
Sbjct: 525  QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 584

Query: 1304 AHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            A+ ++  MR D   P+KA+   + ++D
Sbjct: 585  AYGIRDRMRADNVFPNKALAAQVAQVD 611


>gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]
          Length = 623

 Score =  278 bits (710), Expect = 5e-72
 Identities = 156/461 (33%), Positives = 258/461 (55%)
 Frame = +2

Query: 2    ALLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKK 181
            +LL   + ++   +  +LDEW+++GN +++   +  ++ LR  RMY +AL  S WL ++K
Sbjct: 158  SLLRTVMVTRGMPLPKALDEWVKEGNDLSRGVILFVIRKLRKYRMYGKALQFSEWLESRK 217

Query: 182  LIDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEE 361
             ++     YA+ +D +   +G  +AE F++ +P  +KG +VYRTLL N     N  +AEE
Sbjct: 218  KLELVERDYASRVDLIAKVYGPQRAEKFIEKIPKSLKGELVYRTLLANCVQANNSKKAEE 277

Query: 362  LFRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGT 541
            +F  +  +   L +   N +LLLY    R+KI   L  ME   +KP   TYRILI  KG 
Sbjct: 278  VFNKIKDLELPLTSFTCNQLLLLYKRTDRKKIADVLLLMEKENVKPCLMTYRILIDVKGQ 337

Query: 542  LGDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFF 721
              DI GM                   A++A+    + + EKA  +L E+E   +L +D  
Sbjct: 338  SNDITGMEHILETMKAEGIETDTHTKAVLARNYAIAGLKEKAEAVLKEMEG-DNLNED-- 394

Query: 722  SQRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIF 901
                + R LL  YA L    +VER WK  E++      ++   I  WG+L K+ KAE  F
Sbjct: 395  --PKVRRYLLLLYAELGHADEVERVWKACESNPRTS--EFLAAIEAWGKLKKVKKAEDAF 450

Query: 902  QSMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGL 1081
            + ML+     SA HY ALL VY NHK+L++ KDL+++M ++  ++ R    S++KLYV  
Sbjct: 451  EKMLKAVKKPSAVHYNALLRVYANHKMLTRGKDLIKRMAENDGKISRMTLDSVVKLYVEA 510

Query: 1082 GDMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKM 1261
            G++EKA+ +L        +KP Y+S ++++ +YA+ GD+ + E++F +M+Q GY  +F+ 
Sbjct: 511  GEIEKADSVLQKATQQNQLKPLYVSYMAIMDEYAKKGDIHNTEKMFLRMKQAGYDARFRQ 570

Query: 1262 YSSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            + +L+ AYV AK PA+ ++  M+ D   P++A+   + ++D
Sbjct: 571  FQALIQAYVNAKTPAYGIRERMKADNIFPNRALAAQLTQVD 611


>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
            gi|550335400|gb|EEE92411.2| hypothetical protein
            POPTR_0006s03790g [Populus trichocarpa]
          Length = 623

 Score =  277 bits (709), Expect = 7e-72
 Identities = 158/449 (35%), Positives = 247/449 (55%), Gaps = 1/449 (0%)
 Frame = +2

Query: 41   IVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHL 220
            + S LD+W+ +G  + + E   A+  LR RRM+ RAL +S W    K  +F    YA+ L
Sbjct: 171  VQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASRL 230

Query: 221  DCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLD 400
            D +    G  +AE ++  +P   KG ++YRTLL N     N+ +AEE+F  M  +   + 
Sbjct: 231  DLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPIT 290

Query: 401  TADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXX 580
                N +LLLY    ++KI   L  ME   +KP  +TY+ILI TKG   D+ GM      
Sbjct: 291  PFACNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVET 350

Query: 581  XXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFY 760
                         AI+A+  V   + EKA  +L E+E   +LE+     R   R +L  Y
Sbjct: 351  MKAEGIEPDIRTQAIMARHYVSGGLKEKAEAILKEMEG-GNLEE----HRWACRFMLPLY 405

Query: 761  ALLNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIFQSMLERHHILSA 937
              L +  +V R WK  E     P LD  +  I  WG+L KID+AE +F+ M +    LS+
Sbjct: 406  GALGKADEVSRVWKFCEKS---PRLDECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSS 462

Query: 938  KHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSD 1117
            +HY  LL VY NHK+LSK KDL+++M  SG R+      +L+KLYV  G++EKA+ +L+ 
Sbjct: 463  RHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNK 522

Query: 1118 DYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAK 1297
                  +KP Y S + ++++YA  GD+ +AE++F +MRQ GY+ + + + +L+ AY+IAK
Sbjct: 523  AVQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAK 582

Query: 1298 VPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
             P + ++  ++ D   P+K++   + ++D
Sbjct: 583  APCYGMRERLKADGIFPNKSLAAQLAQVD 611


>ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Populus trichocarpa]
            gi|550320743|gb|EEF04380.2| hypothetical protein
            POPTR_0016s03540g [Populus trichocarpa]
          Length = 618

 Score =  277 bits (709), Expect = 7e-72
 Identities = 161/447 (36%), Positives = 249/447 (55%), Gaps = 1/447 (0%)
 Frame = +2

Query: 47   SSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDC 226
            S LD+W+ +G  + + E   A+  LR RR++ RAL +S W+   K  DFD   YA+ LD 
Sbjct: 168  SVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDERDYASRLDL 227

Query: 227  VFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTA 406
            +    G  +AE +++ +P  +KG ++YRTLL N  +  N  +A E+F  M  +   +   
Sbjct: 228  IAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKDLELPITLF 287

Query: 407  DYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXX 586
             YN +LLLY    ++KI   L  ME   +KP  +TY +LI TKG   DIAGM        
Sbjct: 288  SYNQLLLLYKRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAGMEQIAETMK 347

Query: 587  XXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYAL 766
                       AI+A+  V   + EKA  +L E+E   +LE+     R   + +L  Y  
Sbjct: 348  AEGIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEG-GNLEE----HRWACQFMLPLYGT 402

Query: 767  LNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIFQSMLERHHILSAKH 943
            L +  +V R WK  +     P LD  +  I  WGQL KI +AE +F+ M +    LS+KH
Sbjct: 403  LGKADEVSRLWKFCKKS---PRLDECMAAIEAWGQLKKIPEAEAVFELMSKTWKKLSSKH 459

Query: 944  YKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDDY 1123
            Y ALL VY N+K+LSK KDL+++M  SG R+      +LIKLYV  G++EKA+ +L+   
Sbjct: 460  YSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEKADSILNKAV 519

Query: 1124 GHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKVP 1303
                +KP + S + +++KYA+ GD+ +AE++F +MRQ GY+ + K + +L+ AY+ AK P
Sbjct: 520  QQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQARSKQFQTLIQAYINAKAP 579

Query: 1304 AHKLKHAMREDRFIPSKAMVQLIEKLD 1384
             + ++  ++ D    +KAM   + ++D
Sbjct: 580  CYGMRERLKADGLFANKAMAAQLSQVD 606


>gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
          Length = 612

 Score =  276 bits (707), Expect = 1e-71
 Identities = 159/461 (34%), Positives = 247/461 (53%), Gaps = 1/461 (0%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL++ L +    +  +L +WL+ GN   +S+    +  LR R+ Y +AL +  WL   K+
Sbjct: 148  LLKVMLEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKV 207

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
            ID     YA+ LD V   HG  +AE ++ S+P   +G IVYRTLL N  +  N+ ++EE+
Sbjct: 208  IDLGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEV 267

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   +     N +LLLY    ++KI   L +ME   +KP  +TY++L+ TKG +
Sbjct: 268  FNKMKDLGFPVTVFAINQLLLLYKRVDKKKIADVLAKMEKENVKPSLFTYKLLVDTKGAI 327

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DIAGM                   A IAK  + +   EKA  +L  +E       D   
Sbjct: 328  RDIAGMEKVVESMQAEGVEPDLLFQATIAKHYIFAGHREKAEAILESMEG-----GDIKG 382

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIF 901
             R   + LL  YA L ++ DVER W+  E +   P LD  +  I  +G+LG +++AE++F
Sbjct: 383  NRNACKILLPLYAFLGKKDDVERMWQVCEAN---PRLDECLSAIESFGRLGDVERAEKVF 439

Query: 902  QSMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGL 1081
            + M      LS+K Y AL+ VY +  L  K K+L ++M + G RL      SL+KLYVG 
Sbjct: 440  EDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGA 499

Query: 1082 GDMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKM 1261
            G+++KAE +L        +KP Y S + +L  Y++ GD+ ++E++FD++RQMGY  + + 
Sbjct: 500  GEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQ 559

Query: 1262 YSSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            Y  LL+AYV AK P +  +  M+ D   P+  +  L+   D
Sbjct: 560  YQLLLNAYVHAKTPVYGFRERMKADNIFPNSVIASLLAATD 600


>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
            gi|557532608|gb|ESR43791.1| hypothetical protein
            CICLE_v10011296mg [Citrus clementina]
          Length = 623

 Score =  276 bits (706), Expect = 1e-71
 Identities = 162/449 (36%), Positives = 250/449 (55%), Gaps = 1/449 (0%)
 Frame = +2

Query: 41   IVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHL 220
            I S+L ++ E+GN ++++E   A+  LR+RRMY +AL +S WL T K +DF    YA+ L
Sbjct: 171  IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 230

Query: 221  DCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLD 400
            D +    G  +AES++Q +P   +G +VYRTLL N     N+ +AEE+F  M      + 
Sbjct: 231  DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 290

Query: 401  TADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXX 580
            +   N +L+LY    ++K+   L  ME   +K   ++Y+ILI  KG   D+ GM      
Sbjct: 291  SFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 350

Query: 581  XXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFY 760
                         AI+AK  V     EKA  +L E+E       +    R   R LL  Y
Sbjct: 351  MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-----DNLKEHRWTCRLLLPLY 405

Query: 761  ALLNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIFQSMLERHHILSA 937
            A L +   V R WK  E++   P LD  +  I  WG+L K+++AE +F+ M +    LS 
Sbjct: 406  AELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 462

Query: 938  KHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSD 1117
            KHY ALL VY +HK+LSK KDLV++M +SG  +      +L+KL+V  G++EKA+ +L  
Sbjct: 463  KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLTWDALVKLHVEGGEVEKADSILLK 522

Query: 1118 DYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAK 1297
                   KP + S + ++ +YA+ GD+ + E+IF +MRQ+GY  +FK + +L+ AY+ AK
Sbjct: 523  AQQQNKFKPMFSSYMLIMDQYAKRGDIHNTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 582

Query: 1298 VPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
             PA+ ++  MR D   P+KA+   + ++D
Sbjct: 583  TPAYGIRDRMRADNVFPNKALAAQVAQVD 611


>ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Capsella rubella]
            gi|482575766|gb|EOA39953.1| hypothetical protein
            CARUB_v10008643mg [Capsella rubella]
          Length = 597

 Score =  276 bits (705), Expect = 2e-71
 Identities = 154/448 (34%), Positives = 245/448 (54%)
 Frame = +2

Query: 41   IVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHL 220
            + S+LD+W+E+G  + ++E   A+  LR RRMY RAL ++ WL   K  + +   YA+ L
Sbjct: 145  VASALDKWIEEGKEINRTELANAMLELRKRRMYGRALQMTEWLDEHKQFELEERDYASRL 204

Query: 221  DCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLD 400
            D +    G  + E +++ +P   +G +VYRTLL NYA   N+ + EE+F  M  +   L 
Sbjct: 205  DLISKVRGLYKGEVYIERIPESFRGELVYRTLLSNYAATSNVRKTEEVFNKMRDLGFPLS 264

Query: 401  TADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXX 580
            T   + ML+LY    ++KI   L  ME   +KP   TY+ILI  KG + DI GM      
Sbjct: 265  TFACDQMLILYRRVNKKKIADVLLLMEKENLKPSLNTYKILIDIKGLMNDITGMEQILET 324

Query: 581  XXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFY 760
                         +IIA+    + + EKA ++L E+E      +     R + ++LL  Y
Sbjct: 325  MKSEGVELDLRAQSIIARNYASAGLKEKAEKVLKEMEG-----ESLEENRHVCKDLLSIY 379

Query: 761  ALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQSMLERHHILSAK 940
              L R  +V R WK  E        +    I  +G++ K+ +AE IF+ +L+  H +S+ 
Sbjct: 380  GFLQRADEVTRIWKICEEKPRYN--ESLAAILAFGKIDKVKEAEAIFEKILKMGHRVSSN 437

Query: 941  HYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDD 1120
             Y  LL VY++HK++S+ KDLV++M+ SG  +      ++IKLYV +G++EKAE  LS  
Sbjct: 438  VYSVLLKVYIDHKMVSEGKDLVKQMSDSGCSIGALTWDAVIKLYVEVGEVEKAESALSKA 497

Query: 1121 YGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKV 1300
                 +KP   S + V+ +Y + GDV + E+IF++M+Q GY+ +F+ Y +L+ AYV AK 
Sbjct: 498  TQSKQIKPLMSSFMHVMDEYVKRGDVHNTEKIFERMKQAGYQSRFRAYQALIQAYVNAKA 557

Query: 1301 PAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            PA+ +   M+ D   P+K +   + K D
Sbjct: 558  PAYGMNDRMKADNIFPNKGLAAQLAKAD 585


>ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Glycine max]
          Length = 600

 Score =  276 bits (705), Expect = 2e-71
 Identities = 154/460 (33%), Positives = 259/460 (56%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            L ++ LN+    + S+L +W  QG  +++ E   A++ LR R+MY RA  +  WL + K 
Sbjct: 137  LFKVILNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLESNKK 196

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
            ++F  + YA+ LD +    G  QAE +++S+P   +G ++YRTLL N A++ N+  +E++
Sbjct: 197  LEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLIASEKI 256

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   L     N +LLLY    ++KI   L  ME   +KP  +TYRILI +KG  
Sbjct: 257  FNKMKDLDLPLTVFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGHS 316

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DIAGM                 + A++A+    + + EKA  +L E+E      ++   
Sbjct: 317  NDIAGMEQVFETMKEEGFEPDIQLQALLARHYTSAGLKEKAEAILKEIE-----GENLEE 371

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
            ++ +   LL  YA L +  +VER WK  E+   +   D    +  WG+L KI++AE +F+
Sbjct: 372  KQWVCATLLRLYANLGKADEVERIWKVCESKPRVD--DCLAAVEAWGKLEKIEEAEAVFE 429

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
             M  +   L++K+Y  LL +Y N+K+L+K KDL+++M  SG+R+      +L+KLY+  G
Sbjct: 430  -MASKKWKLNSKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAG 488

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKA+ +L        ++P + + + +L++YA+ GDV ++E+IF KMRQ GY  +   +
Sbjct: 489  EVEKADSVLQKAIQQSQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQF 548

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
              L+ AYV AKVPA+ ++  M+ D   P+K +   +  +D
Sbjct: 549  KVLMQAYVNAKVPAYGIRERMKADNLFPNKTLANQLFLVD 588


>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335948|gb|EFH66365.1| DNA binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 594

 Score =  275 bits (704), Expect = 3e-71
 Identities = 157/446 (35%), Positives = 241/446 (54%)
 Frame = +2

Query: 47   SSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHLDC 226
            S+LD+W+EQG   +++E   A+  LR RRMY RAL ++ WL   K  +     YA+ LD 
Sbjct: 144  SALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYASRLDL 203

Query: 227  VFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLDTA 406
            +    G  + E++++++P   +G +VYRTLL NY    N+  AE +F  M  +   L T 
Sbjct: 204  ISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFPLSTF 263

Query: 407  DYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXXXX 586
              N ML+LY    ++KI   L  ME   +KP+  TY+ILI TKG   DI GM        
Sbjct: 264  TCNQMLILYKRVDKKKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQIVETMK 323

Query: 587  XXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFYAL 766
                       A+IA+    + + EKA ++L E+E      +     R + ++LL  Y  
Sbjct: 324  SEGVEPDLRARALIARNYASAGLKEKAEKVLKEMEG-----ESLEENRHVYKDLLSVYGF 378

Query: 767  LNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQSMLERHHILSAKHY 946
            L R  +V R WK  E        +    I  +G++ K+ +AE +F+ ML+  H +S+  Y
Sbjct: 379  LQRADEVTRIWKICEEKPRYN--ESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVSSNVY 436

Query: 947  KALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSDDYG 1126
              LL VYV+HK++S+ KDLV++M  SG  +      ++IKLY+  G++EKAE  LS    
Sbjct: 437  SVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSKAIQ 496

Query: 1127 HMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAKVPA 1306
               +KP   S + V+ +Y   GDV + E+IF +M+Q GY+ +F+ Y +L+ AYV AK PA
Sbjct: 497  SKQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTYQALIQAYVNAKAPA 556

Query: 1307 HKLKHAMREDRFIPSKAMVQLIEKLD 1384
            + +K  M+ D   P+K +   + K D
Sbjct: 557  YGMKDRMKADNIFPNKGLAAQLTKTD 582


>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Oryza brachyantha]
          Length = 594

 Score =  274 bits (700), Expect = 7e-71
 Identities = 155/461 (33%), Positives = 248/461 (53%), Gaps = 1/461 (0%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL+  L S   ++  +  +WL  GN + +SE    +  LR R++Y +AL +  ++   KL
Sbjct: 129  LLKALLESPRTDVAGAAKKWLNSGNTLERSELFYVILCLRKRKLYRKALQLLEYVEESKL 188

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
            +D     YA+H+D V   HG  +AE +++ +P+  +G IVYRTLL N  +  N+ +AE++
Sbjct: 189  LDLGERDYASHVDLVAKVHGIYKAEKYIEDIPASHRGEIVYRTLLANCVSIANVKKAEQV 248

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +   +     N +LLLY    ++K+   L  ME   +KP  +TY++L+ TKG  
Sbjct: 249  FNKMKDLGFPVSLFSCNQLLLLYKRVDKKKLGDVLSMMEKENVKPSLFTYKLLVDTKGAA 308

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DI  M                 I A IA+  +     EKA  +L ++E     E D   
Sbjct: 309  RDIEDMEKVIETMQADGIEPDHLIQATIARHYIFCGHREKAEAILGQME-----EDDITE 363

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAV-GIRIWGQLGKIDKAEQIF 901
             R   + +L  YALL +  DVERHWK  E +   P L+  +  I  +G LG+++KAE+IF
Sbjct: 364  NRSACKFVLPLYALLGKSADVERHWKVCEAN---PRLEECLPAIEAFGMLGEVEKAEEIF 420

Query: 902  QSMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGL 1081
            ++M +    LS++ Y A+L VY N KL  K K+L ++M   G R+      SL+KLY+  
Sbjct: 421  ENMFKTWKTLSSRFYNAMLKVYANKKLFDKGKELAKRMGDDGCRVGPSTLDSLVKLYLNA 480

Query: 1082 GDMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKM 1261
            G++EKA+ +L        +KP Y + + +L  Y++ GD+ +AE++F K+RQMGY  + + 
Sbjct: 481  GEVEKADSILHKLSHKDKIKPMYNTYLMLLDSYSKKGDIHNAEKLFSKIRQMGYTGRIRQ 540

Query: 1262 YSSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
            Y  LL AY+ AK P +  +  M+ D   P++ +  L+   D
Sbjct: 541  YQLLLEAYLNAKAPIYGFRERMKADDIFPNRVVASLLAATD 581


>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
            lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
            ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  274 bits (700), Expect = 7e-71
 Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 1/449 (0%)
 Frame = +2

Query: 41   IVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKLIDFDPNYYAAHL 220
            I S+LD+W+E+GN +T+ E  +A+  LR RRMY RAL +S WL   K I+ +   Y++ L
Sbjct: 145  IGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNERDYSSRL 204

Query: 221  DCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEELFRTMNAIWPKLD 400
            D      G +  E+++Q +P   KG ++YRTLL N     N+ ++E +F  M  +   L 
Sbjct: 205  DLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLGFPLS 264

Query: 401  TADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTLGDIAGMIXXXXX 580
                + MLLLY    R+KI   L  ME   +KP   TY+ILI  KG   DI+GM      
Sbjct: 265  GFTCDQMLLLYKRIDRKKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGMEQILET 324

Query: 581  XXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFSQRIIVRNLLWFY 760
                         A+ AK    + + EKA ++L E+E      +   + R   ++LL  Y
Sbjct: 325  MKDEGVQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEG-----ESLEANRRAFKDLLSIY 379

Query: 761  ALLNRETDVERHWKKIENDDDIPLLDYAVG-IRIWGQLGKIDKAEQIFQSMLERHHILSA 937
            A L RE +V R WK  E+    P  D ++  I  +G+L K+ +AE IF+ ++      S+
Sbjct: 380  ASLGREDEVTRIWKICESK---PYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASS 436

Query: 938  KHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLGDMEKAEFMLSD 1117
              Y  LL VYV+HK+LSK KDLV++M +SG R++     +LIKLYV  G++EKA+ ML  
Sbjct: 437  NTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLDK 496

Query: 1118 DYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMYSSLLHAYVIAK 1297
                   K    S + ++ +Y++ GDV + E+IF KMR++GY  + + + +LL AY+ AK
Sbjct: 497  ASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREVGYTSRLRQFQALLQAYINAK 556

Query: 1298 VPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
             PA+ ++  M+ D   P+K+M   + + D
Sbjct: 557  APAYGMRDRMKADNIFPNKSMAAQLAQGD 585


>ref|XP_004967670.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Setaria italica]
          Length = 613

 Score =  273 bits (699), Expect = 1e-70
 Identities = 156/460 (33%), Positives = 246/460 (53%)
 Frame = +2

Query: 5    LLEIPLNSKFEEIVSSLDEWLEQGNVVTKSEAMEALKGLRSRRMYPRALTVSSWLWTKKL 184
            LL+  L +   E+  +L++W   GNV+ + E    L  LR RR + +AL +  W+   KL
Sbjct: 148  LLKAMLETPRHEVTKALEKWANDGNVLDRGELFFVLLNLRKRRWFGKALQLLEWVEESKL 207

Query: 185  IDFDPNYYAAHLDCVFNAHGADQAESFLQSLPSHMKGIIVYRTLLKNYANRRNIPRAEEL 364
            ++F    YA+ +D     +G  +AE +++ +P+  +G IVYRTLL N     N+ +AE++
Sbjct: 208  LEFVERDYASRVDLTAKVYGLHKAEQYIEKIPAAHRGEIVYRTLLANCVQEANVNKAEKV 267

Query: 365  FRTMNAIWPKLDTADYNLMLLLYSLAKRQKIMMFLKEMESACIKPDTYTYRILIYTKGTL 544
            F  M  +  +     +N +LLLY    ++KI   L  ME   +KP  ++Y++L+  KGT 
Sbjct: 268  FNRMKDLGFQPTIFSFNQLLLLYKRVDKKKITDVLAMMEKENVKPSLFSYKLLVDAKGTS 327

Query: 545  GDIAGMIXXXXXXXXXXXXXXXXILAIIAKQCVKSAMTEKAGELLSELERLCDLEKDFFS 724
             DI GM                   A  A+  +     EKA  LL  +E       D  +
Sbjct: 328  RDIEGMEKVIEQMETEGVEPDLTFKATAARHYIFDGQREKAEALLESMEG-----DDINT 382

Query: 725  QRIIVRNLLWFYALLNRETDVERHWKKIENDDDIPLLDYAVGIRIWGQLGKIDKAEQIFQ 904
             R   + LL  YA L +  DVER WK  +  D+  L +    I+ +G LG ++KAE++F+
Sbjct: 383  NRAACKILLPLYAFLGKNDDVERIWKVCK--DNTRLDECHSAIQAFGTLGDVEKAEEVFE 440

Query: 905  SMLERHHILSAKHYKALLDVYVNHKLLSKAKDLVEKMTKSGIRLQRPIRTSLIKLYVGLG 1084
            +M  R   LS+K+Y A+L VY N  LL K K+L ++M ++ I+       +L+KLYV  G
Sbjct: 441  NMFLRWKTLSSKYYNAMLKVYANQNLLDKGKELAKRMDENHIKFGNTTLDALVKLYVDAG 500

Query: 1085 DMEKAEFMLSDDYGHMTVKPCYLSIVSVLKKYAETGDVSSAERIFDKMRQMGYKRKFKMY 1264
            ++EKA+ +L        ++P Y S + +L  Y++ GDV ++ER+F K+RQ+GY  + + Y
Sbjct: 501  EVEKADSLLHKLSQKHRIRPQYSSYLMLLDCYSKKGDVHNSERVFHKLRQIGYTGRIRQY 560

Query: 1265 SSLLHAYVIAKVPAHKLKHAMREDRFIPSKAMVQLIEKLD 1384
              LLHAY+ AK PA+  K  M+ D   P+ A+  LI   D
Sbjct: 561  QLLLHAYLHAKAPAYGFKERMKADNIFPNNAVATLITATD 600