BLASTX nr result
ID: Ephedra28_contig00008509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00008509
(464 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK21979.1| unknown [Picea sitchensis] gi|148908424|gb|ABR173... 114 1e-23
ref|XP_006856127.1| hypothetical protein AMTR_s00059p00153580 [A... 85 1e-14
ref|NP_564078.1| RING/U-box superfamily protein [Arabidopsis tha... 58 1e-06
ref|XP_006425748.1| hypothetical protein CICLE_v10026329mg [Citr... 58 1e-06
ref|XP_006425746.1| hypothetical protein CICLE_v10026329mg [Citr... 58 1e-06
ref|XP_006425744.1| hypothetical protein CICLE_v10026329mg [Citr... 58 1e-06
gb|EMJ03735.1| hypothetical protein PRUPE_ppa011052mg [Prunus pe... 58 1e-06
ref|XP_002893041.1| zinc finger family protein [Arabidopsis lyra... 57 3e-06
ref|XP_006304178.1| hypothetical protein CARUB_v10010212mg [Caps... 57 3e-06
ref|XP_006304177.1| hypothetical protein CARUB_v10010212mg [Caps... 57 3e-06
ref|XP_004291908.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-... 57 3e-06
gb|EMJ24382.1| hypothetical protein PRUPE_ppa009193mg [Prunus pe... 57 3e-06
emb|CBI19639.3| unnamed protein product [Vitis vinifera] 57 3e-06
ref|XP_002283534.1| PREDICTED: uncharacterized protein LOC100259... 57 3e-06
emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera] 57 3e-06
>gb|ABK21979.1| unknown [Picea sitchensis] gi|148908424|gb|ABR17325.1| unknown
[Picea sitchensis]
Length = 240
Score = 114 bits (286), Expect = 1e-23
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = +3
Query: 3 NFTVSXXXXXXXXXXXXHMHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQ 182
NFT S MHGFPDGVGY A PGYN+GFSNPFQGGHP T++Q +R+QEQ
Sbjct: 159 NFTFSAGFGLFPSLFGFQMHGFPDGVGYGAAPGYNYGFSNPFQGGHPHTFHQPMTREQEQ 218
Query: 183 EAMLCKYLLIIGMFVLLCLFFL 248
+AML KYLLIIG+FV++CL FL
Sbjct: 219 QAMLSKYLLIIGIFVVVCLIFL 240
>ref|XP_006856127.1| hypothetical protein AMTR_s00059p00153580 [Amborella trichopoda]
gi|548859986|gb|ERN17594.1| hypothetical protein
AMTR_s00059p00153580 [Amborella trichopoda]
Length = 235
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 NFTVSXXXXXXXXXXXXHMHGFPDGVGYAATPGYNHGFSNPFQG----GHPQTYNQQPSR 170
+FT S MHGFPD Y A PG+ +GFSNPF G GH + P++
Sbjct: 150 HFTFSAGFGLFPALFGFQMHGFPDATAYGAAPGFPYGFSNPFHGGHVHGHAHGFPHPPTQ 209
Query: 171 QQEQEAMLCKYLLIIGMFVLLCLFFL 248
Q+QEAML KYLL+IG+FV++C FL
Sbjct: 210 AQQQEAMLSKYLLVIGLFVIICFAFL 235
>ref|NP_564078.1| RING/U-box superfamily protein [Arabidopsis thaliana]
gi|8778447|gb|AAF79455.1|AC025808_37 F18O14.3
[Arabidopsis thaliana] gi|16323202|gb|AAL15335.1|
At1g19310/F18O14_14 [Arabidopsis thaliana]
gi|21436031|gb|AAM51593.1| At1g19310/F18O14_14
[Arabidopsis thaliana] gi|21553370|gb|AAM62463.1|
unknown [Arabidopsis thaliana]
gi|332191707|gb|AEE29828.1| RING/U-box superfamily
protein [Arabidopsis thaliana]
Length = 226
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +3
Query: 54 HMHGFPDGVGY--AATPGYNHGFSNPFQGGHP--QTYNQQPSRQQEQEAMLCKYLLIIGM 221
H HGFPD Y AA+ G+ HGFSNPF GGH +Y + RQ +Q+ L LLI+ +
Sbjct: 158 HFHGFPDAAMYGAAASGGFPHGFSNPFHGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFV 217
Query: 222 FVLLCLF 242
V+ LF
Sbjct: 218 VVVFSLF 224
>ref|XP_006425748.1| hypothetical protein CICLE_v10026329mg [Citrus clementina]
gi|567866253|ref|XP_006425749.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|557527738|gb|ESR38988.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|557527739|gb|ESR38989.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
Length = 255
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +3
Query: 60 HGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYLLIIGMFVLLCL 239
HGFPD Y T G+ +GFS F GGH + QPSR Q+ + +L LL+IG+FV+L L
Sbjct: 162 HGFPDATVYGTTSGFPNGFS-AFHGGHVHGF-PQPSRGQQADNVLKNLLLLIGLFVILAL 219
Query: 240 FF 245
F
Sbjct: 220 LF 221
>ref|XP_006425746.1| hypothetical protein CICLE_v10026329mg [Citrus clementina]
gi|567866249|ref|XP_006425747.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|568824653|ref|XP_006466711.1| PREDICTED: RING finger
protein 5-like isoform X1 [Citrus sinensis]
gi|568824656|ref|XP_006466712.1| PREDICTED: RING finger
protein 5-like isoform X2 [Citrus sinensis]
gi|568824658|ref|XP_006466713.1| PREDICTED: RING finger
protein 5-like isoform X3 [Citrus sinensis]
gi|557527736|gb|ESR38986.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|557527737|gb|ESR38987.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
Length = 234
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +3
Query: 60 HGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYLLIIGMFVLLCL 239
HGFPD Y T G+ +GFS F GGH + QPSR Q+ + +L LL+IG+FV+L L
Sbjct: 162 HGFPDATVYGTTSGFPNGFS-AFHGGHVHGF-PQPSRGQQADNVLKNLLLLIGLFVILAL 219
Query: 240 FF 245
F
Sbjct: 220 LF 221
>ref|XP_006425744.1| hypothetical protein CICLE_v10026329mg [Citrus clementina]
gi|567866245|ref|XP_006425745.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|557527734|gb|ESR38984.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
gi|557527735|gb|ESR38985.1| hypothetical protein
CICLE_v10026329mg [Citrus clementina]
Length = 222
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +3
Query: 60 HGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYLLIIGMFVLLCL 239
HGFPD Y T G+ +GFS F GGH + QPSR Q+ + +L LL+IG+FV+L L
Sbjct: 162 HGFPDATVYGTTSGFPNGFS-AFHGGHVHGF-PQPSRGQQADNVLKNLLLLIGLFVILAL 219
Query: 240 FF 245
F
Sbjct: 220 LF 221
>gb|EMJ03735.1| hypothetical protein PRUPE_ppa011052mg [Prunus persica]
gi|462398068|gb|EMJ03736.1| hypothetical protein
PRUPE_ppa011052mg [Prunus persica]
Length = 225
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +3
Query: 54 HMHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYLLIIGMFVLL 233
H HGFPD Y T G+ +GFS+ F GGH + Q S++Q+ + +L L+IG+FV+L
Sbjct: 162 HYHGFPDATVYGTTSGFPYGFSS-FHGGHAHGFPQPASQRQQVDNVLKNLFLLIGVFVIL 220
Query: 234 CL 239
L
Sbjct: 221 AL 222
>ref|XP_002893041.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338883|gb|EFH69300.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 226
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +3
Query: 54 HMHGFPDGVGY--AATPGYNHGFSNPFQGGHP--QTYNQQPSRQQEQEAMLCKYLLIIGM 221
H HGFPD Y AA+ G+ HGFSNPF GGH +Y + RQ +Q+ L L++ +
Sbjct: 158 HFHGFPDAAMYGAAASGGFPHGFSNPFHGGHSHMHSYQRHGGRQGQQDNHLKLLSLVVFV 217
Query: 222 FVLLCLF 242
V+L LF
Sbjct: 218 VVVLSLF 224
>ref|XP_006304178.1| hypothetical protein CARUB_v10010212mg [Capsella rubella]
gi|482572889|gb|EOA37076.1| hypothetical protein
CARUB_v10010212mg [Capsella rubella]
Length = 229
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 54 HMHGFPDGVGY--AATPGYNHGFSNPFQGGHP--QTYNQQPSRQQEQEAMLCKYLLIIGM 221
H HGFPD Y AA+ + HGFSNPF GGH +Y + RQ +Q+ L LL++
Sbjct: 161 HFHGFPDAAMYGAAASGSFPHGFSNPFHGGHSHMHSYQRHTGRQGQQDNQLKIILLVVFA 220
Query: 222 FVLLCLFF 245
FV+ F
Sbjct: 221 FVVFSFIF 228
>ref|XP_006304177.1| hypothetical protein CARUB_v10010212mg [Capsella rubella]
gi|482572888|gb|EOA37075.1| hypothetical protein
CARUB_v10010212mg [Capsella rubella]
Length = 196
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 54 HMHGFPDGVGY--AATPGYNHGFSNPFQGGHP--QTYNQQPSRQQEQEAMLCKYLLIIGM 221
H HGFPD Y AA+ + HGFSNPF GGH +Y + RQ +Q+ L LL++
Sbjct: 128 HFHGFPDAAMYGAAASGSFPHGFSNPFHGGHSHMHSYQRHTGRQGQQDNQLKIILLVVFA 187
Query: 222 FVLLCLFF 245
FV+ F
Sbjct: 188 FVVFSFIF 195
>ref|XP_004291908.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470111346|ref|XP_004291909.1| PREDICTED: E3
ubiquitin-protein ligase RMA1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470111348|ref|XP_004291910.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1-like isoform
3 [Fragaria vesca subsp. vesca]
gi|470111350|ref|XP_004291911.1| PREDICTED: E3
ubiquitin-protein ligase RMA1-like isoform 4 [Fragaria
vesca subsp. vesca]
Length = 244
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 MHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYLL-IIGMFVLL 233
MHGFPD Y AT G+ HGF N F G H YN +P + + AM+ Y L ++ MFV+
Sbjct: 176 MHGFPDAPLYGATAGFPHGFQNTFHGPHGHRYNFRPGPRVGRPAMVQDYYLKMLIMFVVA 235
Query: 234 C-LFFL*W 254
C L L W
Sbjct: 236 CALMALLW 243
>gb|EMJ24382.1| hypothetical protein PRUPE_ppa009193mg [Prunus persica]
Length = 302
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 57 MHGFPDGVGYAATPGYNHGFSNPFQGGHPQTY--NQQPSRQQEQEAMLCKYLLIIGMFVL 230
+HGFPD Y AT G+ HGFSN F GGHP Y +++ + Q +Q+ L L + + VL
Sbjct: 237 LHGFPDAAMYGATAGFPHGFSNSFPGGHPHRYHIHRRATGQGQQDYFLKMLFLFVVVCVL 296
Query: 231 LCLFF 245
+ L +
Sbjct: 297 VALMW 301
>emb|CBI19639.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 57 MHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYL-LIIGMFVLL 233
+HGFPD Y G+ +GFSN F GGH + Q P Q +Q K L L+IG+FV++
Sbjct: 89 VHGFPDATMYGPAAGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVII 148
Query: 234 CLFF 245
L +
Sbjct: 149 ALIW 152
>ref|XP_002283534.1| PREDICTED: uncharacterized protein LOC100259073 isoform 4 [Vitis
vinifera]
Length = 171
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 57 MHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYL-LIIGMFVLL 233
+HGFPD Y G+ +GFSN F GGH + Q P Q +Q K L L+IG+FV++
Sbjct: 107 VHGFPDATMYGPAAGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVII 166
Query: 234 CLFF 245
L +
Sbjct: 167 ALIW 170
>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
Length = 232
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 57 MHGFPDGVGYAATPGYNHGFSNPFQGGHPQTYNQQPSRQQEQEAMLCKYL-LIIGMFVLL 233
+HGFPD Y G+ +GFSN F GGH + Q P Q +Q K L L+IG+FV++
Sbjct: 168 VHGFPDATMYGPAAGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVII 227
Query: 234 CLFF 245
L +
Sbjct: 228 ALIW 231