BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00008091
         (1016 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40636.1| unknown [Picea sitchensis]                             350   e-118
gb|ABW33491.1| phytochrome P [Pinus sylvestris]                       336   e-114
gb|ABW33488.1| phytochrome P [Pinus sylvestris]                       336   e-114
gb|ABW33477.1| phytochrome P [Pinus sylvestris] gi|158321998|gb|...   336   e-114
sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|C...   340   e-113
ref|XP_006841448.1| hypothetical protein AMTR_s00003p00079190 [A...   329   e-111
dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]     323   e-106
ref|XP_004229009.1| PREDICTED: phytochrome B1-like [Solanum lyco...   321   e-106
ref|XP_006406775.1| hypothetical protein EUTSA_v100199780mg, par...   323   e-106
ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]   322   e-105
ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]   322   e-105
gb|EOY06733.1| Phytochrome B isoform 1 [Theobroma cacao]              315   e-105
gb|ACC60970.1| phytochrome B [Vitis riparia]                          318   e-105
gb|EOY06734.1| Phytochrome B isoform 2 [Theobroma cacao]              315   e-105
gb|EOY06735.1| Phytochrome B isoform 3, partial [Theobroma cacao]     315   e-105
gb|AGW45010.1| phytochrome B [Brassica rapa]                          320   e-105
ref|XP_006358209.1| PREDICTED: phytochrome B [Solanum tuberosum]      318   e-105
sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|em...   318   e-105
gb|ABY61307.1| phytochrome B [Arabidopsis thaliana] gi|164598002...   320   e-105
gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]                   320   e-105

>gb|ACN40636.1| unknown [Picea sitchensis]
          Length = 1132

 Score =  350 bits (897), Expect(2) = e-118
 Identities = 184/244 (75%), Positives = 206/244 (84%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            YN DARL  VFEQSGESGKSFDYTRS+KS+ ESVPEQQITAYLSR+QRGG IQPFGC++A
Sbjct: 37   YNADARLLQVFEQSGESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLA 96

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             EE+TFR+IAYSENA E+LDL P  QSVP       S  +     L IGTDVR++FT +S
Sbjct: 97   VEETTFRIIAYSENAVEMLDLAP--QSVP-------SMEQPQLEVLTIGTDVRTLFTAAS 147

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            +HSLE+AAVAQE+SLMNPI VH K S K FYAIVHRIDVGMVID EPL+T DA +S AGA
Sbjct: 148  AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLKTGDAFVSAAGA 207

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAISRLQSLP G+I  LCD+VVE+VRELTGYDRVMVY+FHEDEHGEVV+EIR
Sbjct: 208  VQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 267

Query: 296  RSDL 285
            RSDL
Sbjct: 268  RSDL 271



 Score =  103 bits (257), Expect(2) = e-118
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PV+VIQS+EL QPLCLVGSTLRAPH CHA YMANMGSIASLVMAVI+
Sbjct: 297 VRMICDCMATPVQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVII 353


>gb|ABW33491.1| phytochrome P [Pinus sylvestris]
          Length = 864

 Score =  336 bits (862), Expect(2) = e-114
 Identities = 176/230 (76%), Positives = 196/230 (85%)
 Frame = -1

Query: 974 GESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIACEESTFRVIAYSEN 795
           GESGKSFDYTRS+KS+ ESVPEQQITAYLSR+QRGG IQPFGC++A EE+TFR+IAYSEN
Sbjct: 1   GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60

Query: 794 APELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSSSHSLERAAVAQEVS 615
           A E+LDL P  QSVP       S  +     L IGTDVR++FT +S+HSLE+AAVAQE+S
Sbjct: 61  AVEMLDLAP--QSVP-------SMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEIS 111

Query: 614 LMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGAVQSQKLAVRAISRL 435
           LMNPI VH K S K FYAIVHRIDVGMVIDLEPLRT DA MS AGAVQSQKLAVRAISRL
Sbjct: 112 LMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRL 171

Query: 434 QSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIRRSDL 285
           QSLP G++G LCD VVE+VRELTGYDRVMVY+FHEDEHGEVV+EIRRSDL
Sbjct: 172 QSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDL 221



 Score =  105 bits (261), Expect(2) = e-114
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PVKVIQS+EL QPLCLVGSTLRAPH CHA YMANMGSIASLVMAVI+
Sbjct: 247 VRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVII 303


>gb|ABW33488.1| phytochrome P [Pinus sylvestris]
          Length = 864

 Score =  336 bits (862), Expect(2) = e-114
 Identities = 176/230 (76%), Positives = 196/230 (85%)
 Frame = -1

Query: 974 GESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIACEESTFRVIAYSEN 795
           GESGKSFDYTRS+KS+ ESVPEQQITAYLSR+QRGG IQPFGC++A EE+TFR+IAYSEN
Sbjct: 1   GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60

Query: 794 APELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSSSHSLERAAVAQEVS 615
           A E+LDL P  QSVP       S  +     L IGTDVR++FT +S+HSLE+AAVAQE+S
Sbjct: 61  AVEMLDLAP--QSVP-------SMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEIS 111

Query: 614 LMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGAVQSQKLAVRAISRL 435
           LMNPI VH K S K FYAIVHRIDVGMVIDLEPLRT DA MS AGAVQSQKLAVRAISRL
Sbjct: 112 LMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRL 171

Query: 434 QSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIRRSDL 285
           QSLP G++G LCD VVE+VRELTGYDRVMVY+FHEDEHGEVV+EIRRSDL
Sbjct: 172 QSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDL 221



 Score =  105 bits (261), Expect(2) = e-114
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PVKVIQS+EL QPLCLVGSTLRAPH CHA YMANMGSIASLVMAVI+
Sbjct: 247 VRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVII 303


>gb|ABW33477.1| phytochrome P [Pinus sylvestris] gi|158321998|gb|ABW33478.1|
           phytochrome P [Pinus sylvestris]
           gi|158322000|gb|ABW33479.1| phytochrome P [Pinus
           sylvestris] gi|158322002|gb|ABW33480.1| phytochrome P
           [Pinus sylvestris] gi|158322004|gb|ABW33481.1|
           phytochrome P [Pinus sylvestris]
           gi|158322006|gb|ABW33482.1| phytochrome P [Pinus
           sylvestris] gi|158322008|gb|ABW33483.1| phytochrome P
           [Pinus sylvestris] gi|158322010|gb|ABW33484.1|
           phytochrome P [Pinus sylvestris]
           gi|158322012|gb|ABW33485.1| phytochrome P [Pinus
           sylvestris] gi|158322014|gb|ABW33486.1| phytochrome P
           [Pinus sylvestris] gi|158322016|gb|ABW33487.1|
           phytochrome P [Pinus sylvestris]
           gi|158322020|gb|ABW33489.1| phytochrome P [Pinus
           sylvestris] gi|158322022|gb|ABW33490.1| phytochrome P
           [Pinus sylvestris]
          Length = 864

 Score =  336 bits (862), Expect(2) = e-114
 Identities = 176/230 (76%), Positives = 196/230 (85%)
 Frame = -1

Query: 974 GESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIACEESTFRVIAYSEN 795
           GESGKSFDYTRS+KS+ ESVPEQQITAYLSR+QRGG IQPFGC++A EE+TFR+IAYSEN
Sbjct: 1   GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60

Query: 794 APELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSSSHSLERAAVAQEVS 615
           A E+LDL P  QSVP       S  +     L IGTDVR++FT +S+HSLE+AAVAQE+S
Sbjct: 61  AVEMLDLAP--QSVP-------SMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEIS 111

Query: 614 LMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGAVQSQKLAVRAISRL 435
           LMNPI VH K S K FYAIVHRIDVGMVIDLEPLRT DA MS AGAVQSQKLAVRAISRL
Sbjct: 112 LMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRL 171

Query: 434 QSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIRRSDL 285
           QSLP G++G LCD VVE+VRELTGYDRVMVY+FHEDEHGEVV+EIRRSDL
Sbjct: 172 QSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDL 221



 Score =  105 bits (261), Expect(2) = e-114
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PVKVIQS+EL QPLCLVGSTLRAPH CHA YMANMGSIASLVMAVI+
Sbjct: 247 VRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVII 303


>sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|CAA65510.1| phytochrome
            [Pinus sylvestris]
          Length = 1131

 Score =  340 bits (872), Expect(2) = e-113
 Identities = 181/244 (74%), Positives = 202/244 (82%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            YN DARL  VFEQSGESGKSFDYTRS++    +VPEQQITAYLSR+QRGG IQPFGC++A
Sbjct: 37   YNSDARLLQVFEQSGESGKSFDYTRSIQVHNRAVPEQQITAYLSRIQRGGRIQPFGCVLA 96

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             EE+TFR+IAYSEN  E+LDL    QSVP       S  +     L IGTDVR++FT +S
Sbjct: 97   VEETTFRIIAYSENE-EMLDLG--AQSVP-------SMEKPQQDVLTIGTDVRTLFTAAS 146

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            +HSLE+AAVAQE+SLMNPI VH K S K FYAIVHRIDVGMVIDLEPLRT DA MS AGA
Sbjct: 147  AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGA 206

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAISRLQSLP G++G LCD VVE+VRELTGYDRVMVY+FHEDEHGEVV+EIR
Sbjct: 207  VQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 266

Query: 296  RSDL 285
            RSDL
Sbjct: 267  RSDL 270



 Score = 97.1 bits (240), Expect(2) = e-113
 Identities = 46/57 (80%), Positives = 49/57 (85%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PVKVIQS+EL QPLCLVGST  APH CHA YMANMGSI SL+MAVI+
Sbjct: 296 VRMICDCMATPVKVIQSEELMQPLCLVGSTPSAPHGCHAQYMANMGSIRSLLMAVII 352


>ref|XP_006841448.1| hypothetical protein AMTR_s00003p00079190 [Amborella trichopoda]
            gi|548843469|gb|ERN03123.1| hypothetical protein
            AMTR_s00003p00079190 [Amborella trichopoda]
          Length = 1124

 Score =  329 bits (844), Expect(2) = e-111
 Identities = 170/244 (69%), Positives = 202/244 (82%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            YN DARLH VFEQSGESGKSFDY++S+KS+ ESVPE+QITAYLS++QRGG IQPFGCMIA
Sbjct: 34   YNADARLHAVFEQSGESGKSFDYSQSVKSTTESVPEKQITAYLSKIQRGGHIQPFGCMIA 93

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             EES+FRVI+YSENA E+LDL P  Q+VP             +  L + TDVR++FT SS
Sbjct: 94   IEESSFRVISYSENAIEMLDLMP--QAVPSMD---------QTEILKVDTDVRTLFTPSS 142

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            + SL +AA A+E++L+NP+ +H K S K FYAI+HRIDVG+VIDLEP R+ D ++S+AGA
Sbjct: 143  ALSLAKAARAREITLLNPVWIHCKNSGKPFYAILHRIDVGIVIDLEPARSEDPALSIAGA 202

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAISRLQSLP G+IG LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+EIR
Sbjct: 203  VQSQKLAVRAISRLQSLPGGDIGLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAEIR 262

Query: 296  RSDL 285
            RSDL
Sbjct: 263  RSDL 266



 Score =  100 bits (248), Expect(2) = e-111
 Identities = 48/57 (84%), Positives = 49/57 (85%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMICDC A PVKVIQ D L QPLCLVGSTLRAPH CH+ YMANMGSIASL MAVIV
Sbjct: 292 VRMICDCHAKPVKVIQDDGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIV 348


>dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
          Length = 1172

 Score =  323 bits (829), Expect(2) = e-106
 Identities = 171/247 (69%), Positives = 199/247 (80%), Gaps = 3/247 (1%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSM--ESVPEQQITAYLSRMQRGGIIQPFGCM 843
            Y VDARLH VFEQSGESGKSFDY++SLK++    SVPEQQITAYLSR+QRGG IQPFGCM
Sbjct: 65   YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM 124

Query: 842  IACEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSP-FLVIGTDVRSIFT 666
            IA +ESTFR+I YSENA E+L L P  QSVP            + P  L +GTDVRS+FT
Sbjct: 125  IAVDESTFRIIGYSENAREMLGLTP--QSVP----------SLEKPEILAMGTDVRSLFT 172

Query: 665  RSSSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSV 486
             SSS  LERA VA+E++L+NP+ +HSK + K FYAI+HRIDVG+VIDLEP RT D ++S+
Sbjct: 173  ASSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSI 232

Query: 485  AGAVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVS 306
            AGAVQSQKLAVRAIS+LQSLP G+I  LCD VVE VR+LTGYDRVMVY+FHEDEHGEVV+
Sbjct: 233  AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVA 292

Query: 305  EIRRSDL 285
            E RR DL
Sbjct: 293  ESRRDDL 299



 Score = 90.1 bits (222), Expect(2) = e-106
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV V+Q D L Q +CLVGSTLRAPH CH+ YMANMGSIASL MAVI+
Sbjct: 325 VRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 381


>ref|XP_004229009.1| PREDICTED: phytochrome B1-like [Solanum lycopersicum]
            gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName:
            Full=Phytochrome B1 gi|4038600|emb|CAA05293.1|
            phytochrome B1 [Solanum lycopersicum]
          Length = 1131

 Score =  321 bits (823), Expect(2) = e-106
 Identities = 165/244 (67%), Positives = 198/244 (81%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y  DARLH VFEQSGESGKSFDY++S+K++ +SVPE+QITAYL+++QRGG IQPFGCMIA
Sbjct: 40   YTADARLHAVFEQSGESGKSFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIA 99

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E++FR+IAYSENA E+L L P  QSVP             S  L +GTDVR++FT SS
Sbjct: 100  VDEASFRIIAYSENACEMLSLTP--QSVPSLDK---------SEILTVGTDVRTLFTPSS 148

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            S  LERA  A+E++L+NPI +HSK S K FYAI+HR+DVG+VIDLEP RT D ++S+AGA
Sbjct: 149  SVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 208

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS LQSLP G+I  LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 209  VQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK 268

Query: 296  RSDL 285
            RSDL
Sbjct: 269  RSDL 272



 Score = 92.4 bits (228), Expect(2) = e-106
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V Q + L QPLCLVGSTLRAPH CHA YMANMGSIASL +AVI+
Sbjct: 298 VRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVII 354


>ref|XP_006406775.1| hypothetical protein EUTSA_v100199780mg, partial [Eutrema
            salsugineum] gi|557107921|gb|ESQ48228.1| hypothetical
            protein EUTSA_v100199780mg, partial [Eutrema salsugineum]
          Length = 809

 Score =  323 bits (829), Expect(2) = e-106
 Identities = 171/247 (69%), Positives = 199/247 (80%), Gaps = 3/247 (1%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSM--ESVPEQQITAYLSRMQRGGIIQPFGCM 843
            Y VDARLH VFEQSGESGKSFDY++SLK++    SVPEQQITAYLSR+QRGG IQPFGCM
Sbjct: 65   YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM 124

Query: 842  IACEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSP-FLVIGTDVRSIFT 666
            IA +ESTFR+I YSENA E+L L P  QSVP            + P  L +GTDVRS+FT
Sbjct: 125  IAVDESTFRIIGYSENAREMLGLTP--QSVP----------SLEKPEILAMGTDVRSLFT 172

Query: 665  RSSSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSV 486
             SSS  LERA VA+E++L+NP+ +HSK + K FYAI+HRIDVG+VIDLEP RT D ++S+
Sbjct: 173  ASSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSI 232

Query: 485  AGAVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVS 306
            AGAVQSQKLAVRAIS+LQSLP G+I  LCD VVE VR+LTGYDRVMVY+FHEDEHGEVV+
Sbjct: 233  AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVA 292

Query: 305  EIRRSDL 285
            E RR DL
Sbjct: 293  ESRRDDL 299



 Score = 90.1 bits (222), Expect(2) = e-106
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV V+Q D L Q +CLVGSTLRAPH CH+ YMANMGSIASL MAVI+
Sbjct: 325 VRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 381


>ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
          Length = 1132

 Score =  322 bits (826), Expect(2) = e-105
 Identities = 168/245 (68%), Positives = 200/245 (81%), Gaps = 1/245 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y VDARLH VFEQSGESGKSFDY++S+K+S +SVPEQQITAYLS++QRGG IQPFGCMIA
Sbjct: 40   YTVDARLHAVFEQSGESGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIA 99

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSP-FLVIGTDVRSIFTRS 660
             EE++FRVIAYSENA ELL L P  QSVP            + P  L IGTDVR++FT +
Sbjct: 100  IEEASFRVIAYSENARELLGLTP--QSVP----------SLEKPEILTIGTDVRNLFTSN 147

Query: 659  SSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAG 480
            S+  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AG
Sbjct: 148  SAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAG 207

Query: 479  AVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEI 300
            AVQSQKLAVRAIS+LQ+LP G+I  LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+E 
Sbjct: 208  AVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAES 267

Query: 299  RRSDL 285
            +R DL
Sbjct: 268  KRPDL 272



 Score = 89.0 bits (219), Expect(2) = e-105
 Identities = 43/57 (75%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+VIQ   L Q LCLVGSTLRAPH CHA YMANMGSIASL MAV++
Sbjct: 298 VRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVI 354


>ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
          Length = 1132

 Score =  322 bits (826), Expect(2) = e-105
 Identities = 168/245 (68%), Positives = 200/245 (81%), Gaps = 1/245 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y VDARLH VFEQSGESGKSFDY++S+K+S +SVPEQQITAYLS++QRGG IQPFGCMIA
Sbjct: 40   YTVDARLHAVFEQSGESGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIA 99

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSP-FLVIGTDVRSIFTRS 660
             EE++FRVIAYSENA ELL L P  QSVP            + P  L IGTDVR++FT +
Sbjct: 100  IEEASFRVIAYSENARELLGLTP--QSVP----------SLEKPEILTIGTDVRNLFTSN 147

Query: 659  SSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAG 480
            S+  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AG
Sbjct: 148  SAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAG 207

Query: 479  AVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEI 300
            AVQSQKLAVRAIS+LQ+LP G+I  LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+E 
Sbjct: 208  AVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAES 267

Query: 299  RRSDL 285
            +R DL
Sbjct: 268  KRPDL 272



 Score = 89.0 bits (219), Expect(2) = e-105
 Identities = 43/57 (75%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+VIQ   L Q LCLVGSTLRAPH CHA YMANMGSIASL MAV++
Sbjct: 298 VRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVI 354


>gb|EOY06733.1| Phytochrome B isoform 1 [Theobroma cacao]
          Length = 1138

 Score =  315 bits (807), Expect(2) = e-105
 Identities = 161/243 (66%), Positives = 198/243 (81%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y VDARLH VFEQSGE+GKSFDY++S++++ +SVPEQQITAYLS++QRGG IQPFGCM+A
Sbjct: 47   YTVDARLHAVFEQSGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMA 106

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E +FRVIAYSENA E+L + P  QSVP         N   +  L IGTDVR++FT SS
Sbjct: 107  VDEPSFRVIAYSENAREMLGITP--QSVP---------NLEKTEVLTIGTDVRTLFTPSS 155

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            +  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AGA
Sbjct: 156  ATLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGA 215

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS+LQSLP G+I  LCD VVE V+ELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 216  VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESK 275

Query: 296  RSD 288
            R D
Sbjct: 276  RPD 278



 Score = 95.9 bits (237), Expect(2) = e-105
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V+Q D L QPLCLVGSTLRAPH CHA YMANMGSIASL MAVI+
Sbjct: 305 VRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVII 361


>gb|ACC60970.1| phytochrome B [Vitis riparia]
          Length = 1129

 Score =  318 bits (814), Expect(2) = e-105
 Identities = 162/245 (66%), Positives = 202/245 (82%), Gaps = 1/245 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y +DARLH V+EQSGESGKSFDY++S++++ +SVPEQQITAYLS++QRGG IQPFGCM+A
Sbjct: 37   YTMDARLHAVYEQSGESGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLA 96

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSP-FLVIGTDVRSIFTRS 660
             +E+TFRVIA+SENA E+L L P  QSVP            + P  L++GTDVR++FT S
Sbjct: 97   VDEATFRVIAFSENAREMLGLTP--QSVP----------SLEKPEILLVGTDVRTLFTPS 144

Query: 659  SSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAG 480
            S+  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AG
Sbjct: 145  SAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAG 204

Query: 479  AVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEI 300
            AVQSQKLAVRAIS LQSLP G+I  LC+ VVE+VRELTGYDRVMVY+FHEDEHGEVV+E 
Sbjct: 205  AVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYDRVMVYKFHEDEHGEVVAES 264

Query: 299  RRSDL 285
            +RSDL
Sbjct: 265  KRSDL 269



 Score = 93.2 bits (230), Expect(2) = e-105
 Identities = 45/57 (78%), Positives = 47/57 (82%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV VIQ + L QPLCLVGSTLRAPH CHA YMANMGSIASL MAVI+
Sbjct: 295 VRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVII 351


>gb|EOY06734.1| Phytochrome B isoform 2 [Theobroma cacao]
          Length = 1070

 Score =  315 bits (807), Expect(2) = e-105
 Identities = 161/243 (66%), Positives = 198/243 (81%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y VDARLH VFEQSGE+GKSFDY++S++++ +SVPEQQITAYLS++QRGG IQPFGCM+A
Sbjct: 47   YTVDARLHAVFEQSGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMA 106

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E +FRVIAYSENA E+L + P  QSVP         N   +  L IGTDVR++FT SS
Sbjct: 107  VDEPSFRVIAYSENAREMLGITP--QSVP---------NLEKTEVLTIGTDVRTLFTPSS 155

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            +  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AGA
Sbjct: 156  ATLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGA 215

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS+LQSLP G+I  LCD VVE V+ELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 216  VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESK 275

Query: 296  RSD 288
            R D
Sbjct: 276  RPD 278



 Score = 95.9 bits (237), Expect(2) = e-105
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V+Q D L QPLCLVGSTLRAPH CHA YMANMGSIASL MAVI+
Sbjct: 305 VRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVII 361


>gb|EOY06735.1| Phytochrome B isoform 3, partial [Theobroma cacao]
          Length = 976

 Score =  315 bits (807), Expect(2) = e-105
 Identities = 161/243 (66%), Positives = 198/243 (81%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y VDARLH VFEQSGE+GKSFDY++S++++ +SVPEQQITAYLS++QRGG IQPFGCM+A
Sbjct: 47   YTVDARLHAVFEQSGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMA 106

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E +FRVIAYSENA E+L + P  QSVP         N   +  L IGTDVR++FT SS
Sbjct: 107  VDEPSFRVIAYSENAREMLGITP--QSVP---------NLEKTEVLTIGTDVRTLFTPSS 155

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            +  LE+A  A+E++L+NP+ +HSK S K FYAI+HRIDVG+VIDLEP RT D ++S+AGA
Sbjct: 156  ATLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGA 215

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS+LQSLP G+I  LCD VVE V+ELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 216  VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESK 275

Query: 296  RSD 288
            R D
Sbjct: 276  RPD 278



 Score = 95.9 bits (237), Expect(2) = e-105
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V+Q D L QPLCLVGSTLRAPH CHA YMANMGSIASL MAVI+
Sbjct: 305 VRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVII 361


>gb|AGW45010.1| phytochrome B [Brassica rapa]
          Length = 1172

 Score =  320 bits (821), Expect(2) = e-105
 Identities = 169/246 (68%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSM--ESVPEQQITAYLSRMQRGGIIQPFGCM 843
            Y VDARLH VFEQSGESG+SFDY++SLK++    SVPEQQITAYLSR+QRGG IQPFGCM
Sbjct: 61   YTVDARLHAVFEQSGESGRSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM 120

Query: 842  IACEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTR 663
            IA +ESTF +I YSENA E+L L P  QSVP     +          L +GTDVRS+FT 
Sbjct: 121  IAVDESTFAIIGYSENAREMLGLTP--QSVPSLERPE---------ILAMGTDVRSLFTS 169

Query: 662  SSSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVA 483
            SSS  LERA VA+E++L+NP+ +HSK + K FYAI+HRIDVG+VIDLEP RT D ++S+A
Sbjct: 170  SSSVLLERAFVAREITLLNPVWIHSKYTGKPFYAILHRIDVGVVIDLEPARTEDPALSIA 229

Query: 482  GAVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSE 303
            GAVQSQKLAVRAIS+LQSLP G+I  LCDAVVE VR+LTGYDRVMVY+FHEDEHGEVV+E
Sbjct: 230  GAVQSQKLAVRAISQLQSLPGGDIKLLCDAVVESVRDLTGYDRVMVYKFHEDEHGEVVAE 289

Query: 302  IRRSDL 285
             RR DL
Sbjct: 290  SRREDL 295



 Score = 90.1 bits (222), Expect(2) = e-105
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV V+Q D L Q +CLVGSTLRAPH CH+ YMANMGSIASL MAVI+
Sbjct: 321 VRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 377


>ref|XP_006358209.1| PREDICTED: phytochrome B [Solanum tuberosum]
          Length = 1130

 Score =  318 bits (814), Expect(2) = e-105
 Identities = 165/244 (67%), Positives = 197/244 (80%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y  DARLH VFEQSGESGK FDY++S+K++ +SVPE+QITAYL+++QRGG IQPFGCMIA
Sbjct: 38   YTADARLHAVFEQSGESGKFFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIA 97

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E++FRVIAYSENA E+L L P  QSVP     +          L IGTDVR++FT SS
Sbjct: 98   VDEASFRVIAYSENACEMLSLTP--QSVPSLEKCE---------ILTIGTDVRTLFTPSS 146

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            S  LERA  A+E++L+NPI +HSK S K FYAI+HR+DVG+VIDLEP RT D ++S+AGA
Sbjct: 147  SVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 206

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS LQSLP G+I  LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 207  VQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK 266

Query: 296  RSDL 285
            RSDL
Sbjct: 267  RSDL 270



 Score = 92.4 bits (228), Expect(2) = e-105
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V Q + L QPLCLVGSTLRAPH CHA YMANMGSIASL +AVI+
Sbjct: 296 VRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVII 352


>sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|emb|CAA74908.1| phytochrome B
            [Solanum tuberosum]
          Length = 1130

 Score =  318 bits (814), Expect(2) = e-105
 Identities = 165/244 (67%), Positives = 197/244 (80%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSMESVPEQQITAYLSRMQRGGIIQPFGCMIA 837
            Y  DARLH VFEQSGESGK FDY++S+K++ +SVPE+QITAYL+++QRGG IQPFGCMIA
Sbjct: 38   YTADARLHAVFEQSGESGKFFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIA 97

Query: 836  CEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTRSS 657
             +E++FRVIAYSENA E+L L P  QSVP     +          L IGTDVR++FT SS
Sbjct: 98   VDEASFRVIAYSENACEMLSLTP--QSVPSLEKCE---------ILTIGTDVRTLFTPSS 146

Query: 656  SHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVAGA 477
            S  LERA  A+E++L+NPI +HSK S K FYAI+HR+DVG+VIDLEP RT D ++S+AGA
Sbjct: 147  SVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 206

Query: 476  VQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSEIR 297
            VQSQKLAVRAIS LQSLP G+I  LCD VVE VRELTGYDRVMVY+FHEDEHGEVV+E +
Sbjct: 207  VQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK 266

Query: 296  RSDL 285
            RSDL
Sbjct: 267  RSDL 270



 Score = 92.4 bits (228), Expect(2) = e-105
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV+V Q + L QPLCLVGSTLRAPH CHA YMANMGSIASL +AVI+
Sbjct: 296 VRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVII 352


>gb|ABY61307.1| phytochrome B [Arabidopsis thaliana] gi|164598002|gb|ABY61308.1|
            phytochrome B [Arabidopsis thaliana]
            gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis
            thaliana]
          Length = 1168

 Score =  320 bits (819), Expect(2) = e-105
 Identities = 168/246 (68%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSM--ESVPEQQITAYLSRMQRGGIIQPFGCM 843
            Y VDARLH VFEQSGESGKSFDY++SLK++    SVPEQQITAYLSR+QRGG IQPFGCM
Sbjct: 57   YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM 116

Query: 842  IACEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTR 663
            IA +ES+FR+I YSENA E+L L P  QSVP     +          L +GTDVRS+FT 
Sbjct: 117  IAVDESSFRIIGYSENAREMLGLMP--QSVPTLEKPE---------ILAMGTDVRSLFTS 165

Query: 662  SSSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVA 483
            SSS  LERA VA+E++L+NP+ +HSK + K FYAI+HRIDVG+VIDLEP RT D ++S+A
Sbjct: 166  SSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIA 225

Query: 482  GAVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSE 303
            GAVQSQKLAVRAIS+LQSLP G+I  LCD VVE VR+LTGYDRVMVY+FHEDEHGEVV+E
Sbjct: 226  GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAE 285

Query: 302  IRRSDL 285
             +R DL
Sbjct: 286  SKRDDL 291



 Score = 90.1 bits (222), Expect(2) = e-105
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV V+Q D L Q +CLVGSTLRAPH CH+ YMANMGSIASL MAVI+
Sbjct: 317 VRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 373


>gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
          Length = 1168

 Score =  320 bits (819), Expect(2) = e-105
 Identities = 168/246 (68%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
 Frame = -1

Query: 1016 YNVDARLHHVFEQSGESGKSFDYTRSLKSSM--ESVPEQQITAYLSRMQRGGIIQPFGCM 843
            Y VDARLH VFEQSGESGKSFDY++SLK++    SVPEQQITAYLSR+QRGG IQPFGCM
Sbjct: 57   YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM 116

Query: 842  IACEESTFRVIAYSENAPELLDLNPHVQSVPXXXXXQESGNEADSPFLVIGTDVRSIFTR 663
            IA +ES+FR+I YSENA E+L L P  QSVP     +          L +GTDVRS+FT 
Sbjct: 117  IAVDESSFRIIGYSENAREMLGLMP--QSVPTLEKPE---------ILAMGTDVRSLFTS 165

Query: 662  SSSHSLERAAVAQEVSLMNPILVHSKTSSKAFYAIVHRIDVGMVIDLEPLRTRDASMSVA 483
            SSS  LERA VA+E++L+NP+ +HSK + K FYAI+HRIDVG+VIDLEP RT D ++S+A
Sbjct: 166  SSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIA 225

Query: 482  GAVQSQKLAVRAISRLQSLPSGNIGFLCDAVVEDVRELTGYDRVMVYRFHEDEHGEVVSE 303
            GAVQSQKLAVRAIS+LQSLP G+I  LCD VVE VR+LTGYDRVMVY+FHEDEHGEVV+E
Sbjct: 226  GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAE 285

Query: 302  IRRSDL 285
             +R DL
Sbjct: 286  SKRDDL 291



 Score = 90.1 bits (222), Expect(2) = e-105
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -2

Query: 232 VRMICDCRALPVKVIQSDELKQPLCLVGSTLRAPHACHAHYMANMGSIASLVMAVIV 62
           VRMI DC A PV V+Q D L Q +CLVGSTLRAPH CH+ YMANMGSIASL MAVI+
Sbjct: 317 VRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 373