BLASTX nr result

ID: Ephedra28_contig00008037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00008037
         (1148 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77946.1| unknown [Picea sitchensis]                              76   2e-11
ref|XP_643819.1| hypothetical protein DDB_G0275195 [Dictyosteliu...    58   6e-06

>gb|ADE77946.1| unknown [Picea sitchensis]
          Length = 493

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 26/187 (13%)
 Frame = -3

Query: 498 NRGQESLGTNNADNGTVPSNSEMSNFVTSIMQQMMGGXNEP---------PAQDVRNLCD 346
           N  ++ L   N  N  V S S+M+N V S++QQ+MG   +            Q   +L  
Sbjct: 28  NDARDRLRNGNNSNVAVSSGSDMANLVNSVLQQVMGAYTQSGRPNQQQSDEQQATSSLAT 87

Query: 345 NNSNN--TRENATSEVEGGDVSERV------------AAMDIDKQEENLTSATNEIDSST 208
            N  N  T+E   SE    D  E              + ++++ +E +++S+++   +ST
Sbjct: 88  RNETNSLTKEPMVSEKSHNDKQEVALSENTIDVGPVSSTIEVNMKERDMSSSSSNAVAST 147

Query: 207 SSGSKNDAQSLTQPEGQHSSNQTTAP--MGLGGLQPLPSKP-PKQNRKQKSVKTSTHDKE 37
           S  S         PE + S   TT P  +GLGGLQPLPSK   KQN KQ++ K +  D E
Sbjct: 148 SYTSSQSEMLQPIPEKECSDGHTTVPVGLGLGGLQPLPSKKRTKQNHKQQTNKLAELDFE 207

Query: 36  STQNSEA 16
             +N  A
Sbjct: 208 GEKNEAA 214


>ref|XP_643819.1| hypothetical protein DDB_G0275195 [Dictyostelium discoideum AX4]
            gi|60471924|gb|EAL69878.1| hypothetical protein
            DDB_G0275195 [Dictyostelium discoideum AX4]
          Length = 1213

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 66/339 (19%), Positives = 128/339 (37%), Gaps = 15/339 (4%)
 Frame = -3

Query: 990  SQANPSPAAGQTDQAGNNNSTNRAGGSXXXXXXXXXXXXXXXXXPHEQGNNGALNAFYPV 811
            S  N S + G  +++ NN+S N+   +                  +E  NN + N     
Sbjct: 739  SSHNESSSQGSNNESSNNDSNNQNSNNEPSNNESSNQSSNNLSSNNESSNNESSNQ---- 794

Query: 810  LGRLPQMNLSQGAPTPSVNQTAAGGTPNIQSQQPESVQIQPVVTHVQVHAQVGNADGQTM 631
             G   + + S+ +   S NQ+      N  SQ   S +     ++  ++++  N      
Sbjct: 795  -GSNNESSHSESSNNESSNQSLNSEYNNEPSQGSNS-ESSNESSNQSLNSESNNDSSSHG 852

Query: 630  SGFSLPNMFSVPISANSMQGAAQPGTMGQGASQNQRT-NGNDNPVNRGQESLGTNNADNG 454
            S     N      + +S  G+    +  + +SQ+    + N+   N    S G+NN  + 
Sbjct: 853  SNSESSN------NESSSHGSNNESSNNESSSQDSSNYSSNNGSSNNESSSQGSNNESSN 906

Query: 453  TVPSNSEMSNFVTSIMQQMMGGXNEPPAQDVRNLCDNNSNNTRENATSEVEGGDVSERVA 274
               +N   +N  +S         NEP  Q   N   NN ++  E++ +E      +   +
Sbjct: 907  QGSNNESSNNESSSQGSNNESSHNEPSNQSSNNESSNNESSNNESSNNESSSKGSNNESS 966

Query: 273  AMDIDKQEENLTSATNEIDS------STSSGSKNDA--------QSLTQPEGQHSSNQTT 136
              +   Q  N  S+ NE ++      S+S GS N++        +S +Q     SSN  +
Sbjct: 967  NNESSNQGSNNESSNNESNNESSNNESSSQGSNNESSNNESSNNESSSQSSNNGSSNNES 1026

Query: 135  APMGLGGLQPLPSKPPKQNRKQKSVKTSTHDKESTQNSE 19
            +  G            + + K  + ++S+H   +  +S+
Sbjct: 1027 SNQGSNNESSSHGSNNESSSKGSNNESSSHGSNNESSSQ 1065


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