BLASTX nr result
ID: Ephedra28_contig00008005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00008005
(476 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK24519.1| unknown [Picea sitchensis] 125 5e-27
gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transc... 109 4e-22
gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transc... 109 4e-22
gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transc... 109 4e-22
ref|XP_001776556.1| predicted protein [Physcomitrella patens] gi... 109 4e-22
ref|XP_001782492.1| predicted protein [Physcomitrella patens] gi... 109 4e-22
ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing fac... 107 1e-21
gb|EMT27182.1| Splicing factor, arginine/serine-rich 7 [Aegilops... 107 2e-21
gb|EMS45589.1| Serine/arginine-rich splicing factor 7 [Triticum ... 107 2e-21
gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum] 107 2e-21
dbj|BAJ94659.1| predicted protein [Hordeum vulgare subsp. vulgar... 107 2e-21
ref|XP_004964637.1| PREDICTED: serine/arginine-rich splicing fac... 104 1e-20
ref|XP_004964636.1| PREDICTED: serine/arginine-rich splicing fac... 104 1e-20
ref|XP_004964635.1| PREDICTED: serine/arginine-rich splicing fac... 104 1e-20
ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group] g... 104 1e-20
gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japo... 104 1e-20
gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indi... 104 1e-20
ref|XP_006655864.1| PREDICTED: serine/arginine-rich splicing fac... 103 2e-20
gb|AFW85524.1| hypothetical protein ZEAMMB73_327204 [Zea mays] 103 2e-20
ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [S... 103 2e-20
>gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 125 bits (315), Expect = 5e-27
Identities = 59/76 (77%), Positives = 62/76 (81%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFIEFEDRRDA DAVRALNGK DWRVE+SRN GDDMSC
Sbjct: 30 SVWVARKPPGFAFIEFEDRRDAGDAVRALNGKNDWRVELSRNSGGGGRGGRGRGGDDMSC 89
Query: 294 YKCGESGHFARECSMR 247
YKCGESGHFAREC++R
Sbjct: 90 YKCGESGHFARECNLR 105
>gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens]
Length = 209
Score = 109 bits (272), Expect = 4e-22
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWV RKPPGFAFIEFEDRRDA DA+RALNGK WRVE+SR+ GDDM C
Sbjct: 30 SVWVGRKPPGFAFIEFEDRRDADDAIRALNGKNGWRVELSRS-SGGGGGPRGRGGDDMKC 88
Query: 294 YKCGESGHFARECSMR 247
Y+CGE GHFAREC +R
Sbjct: 89 YECGEPGHFARECRLR 104
>gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens]
Length = 137
Score = 109 bits (272), Expect = 4e-22
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWV RKPPGFAFIEFEDRRDA DA+RALNGK WRVE+SR+ GDDM C
Sbjct: 30 SVWVGRKPPGFAFIEFEDRRDADDAIRALNGKNGWRVELSRS-SGGGGGPRGRGGDDMKC 88
Query: 294 YKCGESGHFARECSMR 247
Y+CGE GHFAREC +R
Sbjct: 89 YECGEPGHFARECRLR 104
>gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens]
Length = 210
Score = 109 bits (272), Expect = 4e-22
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWV RKPPGFAFIEFEDRRDA DA+RALNGK WRVE+SR+ GDDM C
Sbjct: 30 SVWVGRKPPGFAFIEFEDRRDADDAIRALNGKNGWRVELSRS-SGGGGGPRGRGGDDMKC 88
Query: 294 YKCGESGHFARECSMR 247
Y+CGE GHFAREC +R
Sbjct: 89 YECGEPGHFARECRLR 104
>ref|XP_001776556.1| predicted protein [Physcomitrella patens]
gi|162672147|gb|EDQ58689.1| predicted protein
[Physcomitrella patens]
Length = 174
Score = 109 bits (272), Expect = 4e-22
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWV RKPPGFAFIEFEDRRDA DA+RALNGK WRVE+SR+ GDDM C
Sbjct: 30 SVWVGRKPPGFAFIEFEDRRDADDAIRALNGKNGWRVELSRS-SGGGGGPRGRGGDDMKC 88
Query: 294 YKCGESGHFARECSMR 247
Y+CGE GHFAREC +R
Sbjct: 89 YECGEPGHFARECRLR 104
>ref|XP_001782492.1| predicted protein [Physcomitrella patens]
gi|162666045|gb|EDQ52711.1| predicted protein
[Physcomitrella patens]
Length = 224
Score = 109 bits (272), Expect = 4e-22
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWV RKPPGFAFIEFEDRRDA DA+RALNGK WRVE+SR+ GDDM C
Sbjct: 30 SVWVGRKPPGFAFIEFEDRRDADDAIRALNGKNGWRVELSRS-SGGGGGPRGRGGDDMKC 88
Query: 294 YKCGESGHFARECSMR 247
Y+CGE GHFAREC +R
Sbjct: 89 YECGEPGHFARECRLR 104
>ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 185
Score = 107 bits (268), Expect = 1e-21
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+DRRDA DA+R ++GK WRVE+SRN G +M C
Sbjct: 30 SVWVARKPPGFAFIDFDDRRDAQDAIRDIDGKNGWRVELSRNASSGRGGRDRSGGSEMKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGESGHFAREC +R
Sbjct: 90 YECGESGHFARECRLR 105
>gb|EMT27182.1| Splicing factor, arginine/serine-rich 7 [Aegilops tauschii]
Length = 187
Score = 107 bits (266), Expect = 2e-21
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAF++F+DRRDA DA++ L+GK WRVE+SRN G +M C
Sbjct: 30 SVWVARKPPGFAFVDFDDRRDAQDAIKDLDGKNGWRVELSRNASSGRGGRDRSGGSEMKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGESGHFAREC +R
Sbjct: 90 YECGESGHFARECRLR 105
>gb|EMS45589.1| Serine/arginine-rich splicing factor 7 [Triticum urartu]
Length = 191
Score = 107 bits (266), Expect = 2e-21
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAF++F+DRRDA DA++ L+GK WRVE+SRN G +M C
Sbjct: 30 SVWVARKPPGFAFVDFDDRRDAQDAIKDLDGKNGWRVELSRNASSGRGGRDRSGGSEMKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGESGHFAREC +R
Sbjct: 90 YECGESGHFARECRLR 105
>gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum]
Length = 167
Score = 107 bits (266), Expect = 2e-21
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAF++F+DRRDA DA++ L+GK WRVE+SRN G +M C
Sbjct: 30 SVWVARKPPGFAFVDFDDRRDAQDAIKDLDGKNGWRVELSRNASSGRGGRDRSGGSEMKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGESGHFAREC +R
Sbjct: 90 YECGESGHFARECRLR 105
>dbj|BAJ94659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517812|dbj|BAK03824.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 182
Score = 107 bits (266), Expect = 2e-21
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAF++F+DRRDA DA++ L+GK WRVE+SRN G +M C
Sbjct: 30 SVWVARKPPGFAFVDFDDRRDAQDAIKDLDGKNGWRVELSRNASSGRGGRDRSGGSEMKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGESGHFAREC +R
Sbjct: 90 YECGESGHFARECRLR 105
>ref|XP_004964637.1| PREDICTED: serine/arginine-rich splicing factor RSZ21A-like isoform
X3 [Setaria italica]
Length = 186
Score = 104 bits (260), Expect = 1e-20
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+D+RDA DA+R L+GK WRVEISRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDKRDAEDAIRDLDGKNGWRVEISRNSSSGRGGRDRQGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>ref|XP_004964636.1| PREDICTED: serine/arginine-rich splicing factor RSZ21A-like isoform
X2 [Setaria italica]
Length = 193
Score = 104 bits (260), Expect = 1e-20
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+D+RDA DA+R L+GK WRVEISRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDKRDAEDAIRDLDGKNGWRVEISRNSSSGRGGRDRQGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>ref|XP_004964635.1| PREDICTED: serine/arginine-rich splicing factor RSZ21A-like isoform
X1 [Setaria italica]
Length = 209
Score = 104 bits (260), Expect = 1e-20
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+D+RDA DA+R L+GK WRVEISRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDKRDAEDAIRDLDGKNGWRVEISRNSSSGRGGRDRQGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName:
Full=Serine/arginine-rich splicing factor RSZ21A;
AltName: Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor,
arginine/serine-rich 7 [Oryza sativa Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor,
arginine/serine-rich 7 [Oryza sativa Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa
Japonica Group] gi|215686646|dbj|BAG88899.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 185
Score = 104 bits (259), Expect = 1e-20
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+DRRDA DA+R ++GK WRVE+SRN + C
Sbjct: 30 SVWVARKPPGFAFIDFDDRRDAQDAIRDIDGKNGWRVELSRNASSGRGGRDRYGSSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 104 bits (259), Expect = 1e-20
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+DRRDA DA+R ++GK WRVE+SRN + C
Sbjct: 109 SVWVARKPPGFAFIDFDDRRDAQDAIRDIDGKNGWRVELSRNASSGRGGRDRYGSSESKC 168
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 169 YECGETGHFARECRLR 184
>gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 104 bits (259), Expect = 1e-20
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+DRRDA DA+R ++GK WRVE+SRN + C
Sbjct: 109 SVWVARKPPGFAFIDFDDRRDAQDAIRDIDGKNGWRVELSRNASSGRGGRDRYGSSESKC 168
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 169 YECGETGHFARECRLR 184
>ref|XP_006655864.1| PREDICTED: serine/arginine-rich splicing factor RSZ21A-like [Oryza
brachyantha]
Length = 185
Score = 103 bits (258), Expect = 2e-20
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+DRRDA D++R L+GK WRVE+SRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDRRDAQDSIRDLDGKNGWRVELSRNASSGRGGRDRYGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>gb|AFW85524.1| hypothetical protein ZEAMMB73_327204 [Zea mays]
Length = 138
Score = 103 bits (258), Expect = 2e-20
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+D+RDA DA+R L+GK WRVE+SRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDKRDAEDAIRDLDGKNGWRVELSRNASGGRGGRDRHGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105
>ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein
SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich
splicing factor RSZ21 transcript I [Sorghum bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich
splicing factor RSZ21 transcript III [Sorghum bicolor]
Length = 186
Score = 103 bits (258), Expect = 2e-20
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = -3
Query: 474 SVWVARKPPGFAFIEFEDRRDASDAVRALNGKKDWRVEISRNXXXXXXXXXXXXGDDMSC 295
SVWVARKPPGFAFI+F+D+RDA DA+R L+GK WRVE+SRN G + C
Sbjct: 30 SVWVARKPPGFAFIDFDDKRDAEDAIRDLDGKNGWRVELSRNASSGRGGRDRYGGSESKC 89
Query: 294 YKCGESGHFARECSMR 247
Y+CGE+GHFAREC +R
Sbjct: 90 YECGETGHFARECRLR 105