BLASTX nr result
ID: Ephedra28_contig00007978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00007978
(588 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17840.1| unknown [Picea sitchensis] 214 1e-53
gb|ABR16646.1| unknown [Picea sitchensis] 214 1e-53
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao] 193 2e-47
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps... 192 4e-47
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps... 192 4e-47
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe... 192 7e-47
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-... 191 2e-46
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr... 190 2e-46
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-... 190 2e-46
gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus... 189 4e-46
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab... 189 4e-46
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-... 189 5e-46
gb|AAB69385.1| sigma factor 2 [Arabidopsis thaliana] 189 5e-46
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis] 188 8e-46
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 188 8e-46
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 188 8e-46
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 188 8e-46
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 188 8e-46
dbj|BAC43527.1| putative plastid RNA polymerase sigma-subunit SI... 188 1e-45
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A... 188 1e-45
>gb|ABR17840.1| unknown [Picea sitchensis]
Length = 495
Score = 214 bits (546), Expect = 1e-53
Identities = 96/183 (52%), Positives = 141/183 (77%)
Frame = -3
Query: 550 KNQSNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRK 371
++ S+ RLLTA+EE+ SR +QDL KL+RI+ +YK+K GKEPT+ QWAE +G+DQK+L+
Sbjct: 190 RDWSSSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKM 249
Query: 370 RLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRF 191
RLE G +S K+++CNLRLV+S+A YQN G+ LQDL+QAG +GL+R EKFD +RGF+F
Sbjct: 250 RLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKF 309
Query: 190 STYAHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDIT 11
STYA+WWIRQ++ K LT QS+ + +P + VE+ +++R L ++H R PT +E++++
Sbjct: 310 STYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVA 369
Query: 10 GFS 2
G S
Sbjct: 370 GIS 372
>gb|ABR16646.1| unknown [Picea sitchensis]
Length = 592
Score = 214 bits (546), Expect = 1e-53
Identities = 96/183 (52%), Positives = 141/183 (77%)
Frame = -3
Query: 550 KNQSNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRK 371
++ S+ RLLTA+EE+ SR +QDL KL+RI+ +YK+K GKEPT+ QWAE +G+DQK+L+
Sbjct: 287 RDWSSSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKM 346
Query: 370 RLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRF 191
RLE G +S K+++CNLRLV+S+A YQN G+ LQDL+QAG +GL+R EKFD +RGF+F
Sbjct: 347 RLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKF 406
Query: 190 STYAHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDIT 11
STYA+WWIRQ++ K LT QS+ + +P + VE+ +++R L ++H R PT +E++++
Sbjct: 407 STYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVA 466
Query: 10 GFS 2
G S
Sbjct: 467 GIS 469
>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
Length = 623
Score = 193 bits (491), Expect = 2e-47
Identities = 90/180 (50%), Positives = 127/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLTANEE+ S +QDL KLER++++ ++ G +PT QWA A G+DQK+LR RL
Sbjct: 310 STSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLN 369
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 370 YGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 429
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 430 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLS 489
>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
gi|482575837|gb|EOA40024.1| hypothetical protein
CARUB_v10008711mg [Capsella rubella]
Length = 571
Score = 192 bits (489), Expect = 4e-47
Identities = 89/180 (49%), Positives = 128/180 (71%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S+ +LLT EE S +QDL KLER++ + ++ G++PT +QWA A G+DQKSLRKR+
Sbjct: 267 SSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRIN 326
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 327 YGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 386
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446
>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
gi|482575836|gb|EOA40023.1| hypothetical protein
CARUB_v10008711mg [Capsella rubella]
Length = 487
Score = 192 bits (489), Expect = 4e-47
Identities = 89/180 (49%), Positives = 128/180 (71%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S+ +LLT EE S +QDL KLER++ + ++ G++PT +QWA A G+DQKSLRKR+
Sbjct: 267 SSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRIN 326
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 327 YGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 386
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446
>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
Length = 401
Score = 192 bits (487), Expect = 7e-47
Identities = 91/177 (51%), Positives = 126/177 (71%)
Frame = -3
Query: 532 RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 353
RLLTANEEI S +Q+L KLE+++++ + G +PTI QWA A G+DQK+LRKR+ G
Sbjct: 102 RLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGI 161
Query: 352 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 173
+ KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 162 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHW 221
Query: 172 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
WI+QAV K+L+ QS+ + +P + VEA ++R+ K + R P +E+++ TG S
Sbjct: 222 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 278
>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
Length = 564
Score = 191 bits (484), Expect = 2e-46
Identities = 90/180 (50%), Positives = 125/180 (69%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLT EEI S +QDL KLE+I++ ++ G +PT QWA G+DQK+LRKRL
Sbjct: 262 SASRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLN 321
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLV+G EKFDGT+GF+FSTY
Sbjct: 322 YGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTY 381
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 382 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLS 441
>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
gi|557095448|gb|ESQ36030.1| hypothetical protein
EUTSA_v10007187mg [Eutrema salsugineum]
Length = 579
Score = 190 bits (483), Expect = 2e-46
Identities = 88/180 (48%), Positives = 127/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S+ +LLTA EE S +QDL KLER++ + ++ G +PT QWA A G+DQKSLRKR+
Sbjct: 277 SSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQKSLRKRIN 336
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + + +M+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 337 YGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 396
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + + P +E+++ TG S
Sbjct: 397 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLS 456
>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
subsp. vesca]
Length = 616
Score = 190 bits (483), Expect = 2e-46
Identities = 90/177 (50%), Positives = 124/177 (70%)
Frame = -3
Query: 532 RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 353
RLLTANEEI S +Q+L KLE++++ + G +PT QWA A G+DQK+LRKR+ G
Sbjct: 317 RLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGI 376
Query: 352 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 173
+ KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 377 MCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 436
Query: 172 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
WI+QAV K+L+ QS+ + +P + VEA ++R+ K + R P +E+++ TG S
Sbjct: 437 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 493
>gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus vulgaris]
Length = 1302
Score = 189 bits (481), Expect = 4e-46
Identities = 89/177 (50%), Positives = 124/177 (70%)
Frame = -3
Query: 532 RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 353
RLLT+ EEI S +QDL KLERI++ ++ G +PT QWA G+DQK+LRKRL G
Sbjct: 1003 RLLTSTEEIKLSEGIQDLLKLERIQEDLVERCGGQPTFAQWAAVAGVDQKTLRKRLSHGR 1062
Query: 352 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 173
+ KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLV+G EKFDGT+GF+FSTYAHW
Sbjct: 1063 FCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHW 1122
Query: 172 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
WI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ G S
Sbjct: 1123 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEAAGLS 1179
>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 189 bits (481), Expect = 4e-46
Identities = 88/180 (48%), Positives = 126/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S+ +LLT EE S +QDL KLER++ + ++ G++PT QWA A G+DQKSLRKR+
Sbjct: 268 SSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGVDQKSLRKRIH 327
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 328 HGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 387
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + + P +E+++ TG S
Sbjct: 388 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
lycopersicum]
Length = 613
Score = 189 bits (480), Expect = 5e-46
Identities = 90/177 (50%), Positives = 126/177 (71%)
Frame = -3
Query: 532 RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 353
RLLTA+EE SR +QDL KLER++ + ++ G +PT QWA A G+DQ +LRKRL G
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373
Query: 352 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 173
+ KM+ N+RLV+SIA YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433
Query: 172 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
WI+QAV K+L+ QS+ + +P + VEA ++++ + + ++ R P E+++ TG S
Sbjct: 434 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLS 490
>gb|AAB69385.1| sigma factor 2 [Arabidopsis thaliana]
Length = 574
Score = 189 bits (480), Expect = 5e-46
Identities = 88/184 (47%), Positives = 127/184 (69%)
Frame = -3
Query: 553 TKNQSNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLR 374
T + S +LLT EE S +QDL KLER++ + ++ G++PT QWA A G+DQKSLR
Sbjct: 266 TTSSSKLKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLR 325
Query: 373 KRLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFR 194
+R+ G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+
Sbjct: 326 QRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFK 385
Query: 193 FSTYAHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDI 14
FSTYAHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + + P +E+++
Sbjct: 386 FSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEA 445
Query: 13 TGFS 2
TG S
Sbjct: 446 TGLS 449
>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 574
Score = 188 bits (478), Expect = 8e-46
Identities = 88/180 (48%), Positives = 126/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLTA EEI S +QDL KLE+++++ ++ G PT QWA A G+DQK+LR+R+
Sbjct: 271 STSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRIN 330
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 331 YGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 390
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 391 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLS 450
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
tuberosum]
Length = 613
Score = 188 bits (478), Expect = 8e-46
Identities = 89/177 (50%), Positives = 126/177 (71%)
Frame = -3
Query: 532 RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 353
RLLTA+EE SR +QDL KLER++ + ++ G +PT QWA A G+DQ +LRKRL G
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373
Query: 352 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 173
+ KM+ N+RLV+SIA YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433
Query: 172 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
WI+QAV K+L+ QS+++ +P + VEA ++++ + + ++ R P E+++ G S
Sbjct: 434 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLS 490
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 188 bits (478), Expect = 8e-46
Identities = 86/180 (47%), Positives = 126/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLTA EE+ S +QDL KLE++++ +++ G +PT QWA A G+DQK+LR+R
Sbjct: 273 STSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTN 332
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 333 YGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 392
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 393 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 452
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 188 bits (478), Expect = 8e-46
Identities = 86/180 (47%), Positives = 126/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLTA EE+ S +QDL KLE++++ +++ G +PT QWA A G+DQK+LR+R
Sbjct: 276 STSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTN 335
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 336 YGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 395
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 396 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 455
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 188 bits (478), Expect = 8e-46
Identities = 87/180 (48%), Positives = 127/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S RLLTA+EE+ S +QDL KLER++++ ++ G +PT QWA A G+DQ++LRKR+
Sbjct: 267 STSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRIN 326
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 327 HGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 386
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ G S
Sbjct: 387 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLS 446
>dbj|BAC43527.1| putative plastid RNA polymerase sigma-subunit SIG1 [Arabidopsis
thaliana]
Length = 572
Score = 188 bits (477), Expect = 1e-45
Identities = 87/180 (48%), Positives = 126/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
S+ +LLT EE S +QDL KLER++ + ++ G++PT QWA A G+DQKSLR+R+
Sbjct: 268 SSSKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIH 327
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 328 HGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 387
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+++ +P + VEA ++++ + + + P +E+++ TG S
Sbjct: 388 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447
>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
gi|548831956|gb|ERM94758.1| hypothetical protein
AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 188 bits (477), Expect = 1e-45
Identities = 87/180 (48%), Positives = 127/180 (70%)
Frame = -3
Query: 541 SNRRLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 362
++ +LLTA EE+ S +QDL KLE++ ++ ++ G EPT QWA A GIDQK+LR+RL
Sbjct: 267 NSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLS 326
Query: 361 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTY 182
G + KM+ N+RLV+SIA YQ +G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 327 YGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 386
Query: 181 AHWWIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 2
AHWWI+QAV K+L+ QS+ + +P + V+A ++R+ ++ R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLS 446