BLASTX nr result
ID: Ephedra28_contig00007939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00007939
(642 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A... 343 3e-92
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 339 3e-91
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 339 3e-91
ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutr... 333 2e-89
ref|XP_001773330.1| predicted protein [Physcomitrella patens] gi... 332 4e-89
ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Caps... 332 7e-89
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 332 7e-89
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 330 2e-88
ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragari... 328 6e-88
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 328 6e-88
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 328 1e-87
ref|XP_001773082.1| predicted protein [Physcomitrella patens] gi... 327 1e-87
ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]... 327 2e-87
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The... 327 2e-87
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca... 327 2e-87
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 327 2e-87
ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Caps... 327 2e-87
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 325 9e-87
ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata] ... 324 1e-86
gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus pe... 323 2e-86
>ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
gi|548860061|gb|ERN17669.1| hypothetical protein
AMTR_s00059p00193620 [Amborella trichopoda]
Length = 884
Score = 343 bits (879), Expect = 3e-92
Identities = 166/213 (77%), Positives = 189/213 (88%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKEI+HDNTVTWLA+WNDPINPKE KYVFLAASS+LKG SDKEKYEKAR+LK+YI+ IR+
Sbjct: 537 WKEIKHDNTVTWLAFWNDPINPKELKYVFLAASSSLKGQSDKEKYEKARLLKDYIDSIRE 596
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKD K+Q A+ATYLID+LALRAGNEKDDDEADTVGCCTLKVENV L+ SS+
Sbjct: 597 TYTKHFNSKDIMKRQTAIATYLIDRLALRAGNEKDDDEADTVGCCTLKVENVTLLPLSSL 656
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V P VYKAIG+F+ K++ DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 657 QFDFLGKDSIRYFNTVEVLPPVYKAIGDFRSGKKEGDDLFDKLDTSKLNAHLKELMPGLT 716
Query: 543 AKVFRTYNASITLDRLLQETEGVDIPQKVAAYQ 641
AKVFRTYNAS TLDRLLQ+T G + +K+A YQ
Sbjct: 717 AKVFRTYNASETLDRLLQDTTGSNPTEKIADYQ 749
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 339 bits (870), Expect = 3e-91
Identities = 166/214 (77%), Positives = 188/214 (87%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR+LK+YI++IR
Sbjct: 363 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRA 422
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ +
Sbjct: 423 TYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKL 482
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRYFNTV V+ VYKAIG+FK K DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 483 EFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLT 542
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +E G D +K+ YQ
Sbjct: 543 AKVFRTYNASITLDEMLNREARGGDAMEKIVIYQ 576
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 339 bits (870), Expect = 3e-91
Identities = 166/214 (77%), Positives = 188/214 (87%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR+LK+YI++IR
Sbjct: 522 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRA 581
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ +
Sbjct: 582 TYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKL 641
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRYFNTV V+ VYKAIG+FK K DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 642 EFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLT 701
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +E G D +K+ YQ
Sbjct: 702 AKVFRTYNASITLDEMLNREARGGDAMEKIVIYQ 735
>ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutrema salsugineum]
gi|567179002|ref|XP_006401469.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102558|gb|ESQ42921.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102559|gb|ESQ42922.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
Length = 904
Score = 333 bits (854), Expect = 2e-89
Identities = 162/214 (75%), Positives = 187/214 (87%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSALKGLSDKEKYEKAR LK++I IR
Sbjct: 543 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARKLKDHIGHIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFSNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVDCIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVEPPVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD++L +ET ++P+KV YQ
Sbjct: 723 AKVFRTYNASITLDQMLSKETRDGEVPEKVVVYQ 756
>ref|XP_001773330.1| predicted protein [Physcomitrella patens]
gi|162675372|gb|EDQ61868.1| predicted protein
[Physcomitrella patens]
Length = 632
Score = 332 bits (852), Expect = 4e-89
Identities = 162/213 (76%), Positives = 184/213 (86%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKEIRHDNTVTWLAYW DPIN KEFKYVFLAASS+LKG SD +KYEKARMLK+YI+DIR+
Sbjct: 272 WKEIRHDNTVTWLAYWKDPINDKEFKYVFLAASSSLKGQSDMQKYEKARMLKDYIDDIRR 331
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F S D TK+QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V LV P S+
Sbjct: 332 TYTHDFSSSDPTKQQIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVTLVAPKSL 391
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V VYKAIG+FKK K++ DDLF+ LDT+KLN HLK +MP LT
Sbjct: 392 QFDFLGKDSIRYFNTVEVDERVYKAIGQFKKGKKEGDDLFERLDTTKLNLHLKGIMPSLT 451
Query: 543 AKVFRTYNASITLDRLLQETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD LLQ+T G + +A YQ
Sbjct: 452 AKVFRTYNASITLDNLLQDTTGETTIEIIADYQ 484
>ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Capsella rubella]
gi|482548276|gb|EOA12470.1| hypothetical protein
CARUB_v10025842mg [Capsella rubella]
Length = 923
Score = 332 bits (850), Expect = 7e-89
Identities = 162/214 (75%), Positives = 187/214 (87%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINP+EFKYVFLAASSALKGLSDKEKYEKAR L ++I++IR
Sbjct: 557 WKEVKHDNTVTWLAFWNDPINPREFKYVFLAASSALKGLSDKEKYEKARNLSDHIDNIRT 616
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ NF +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ I
Sbjct: 617 TYTKNFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKI 676
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFD LDTSKLN HLKEL+PGLT
Sbjct: 677 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDMLDTSKLNAHLKELVPGLT 736
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L QET+ D+ QK+ YQ
Sbjct: 737 AKVFRTYNASITLDEMLSQETKDGDVNQKIVVYQ 770
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 332 bits (850), Expect = 7e-89
Identities = 166/214 (77%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LKNYI+DIR
Sbjct: 497 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRA 556
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV P+S+
Sbjct: 557 TYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSL 616
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRY TV V+ VYKAI +F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 617 QFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLT 676
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L ++T+ D+ QKV YQ
Sbjct: 677 AKVFRTYNASITLDEMLNKDTKEGDVAQKVVVYQ 710
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 330 bits (846), Expect = 2e-88
Identities = 164/214 (76%), Positives = 184/214 (85%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS LKGLSDKEKYEKAR+LK+YI+ IR
Sbjct: 547 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRA 606
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TKKQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV V P+ +
Sbjct: 607 AYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 666
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRY N V V+ V+KAI +F+ K S DLFD LDTSKLN HLKELMPGLT
Sbjct: 667 KFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLT 726
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET+G D+ +KV YQ
Sbjct: 727 AKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQ 760
>ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragaria vesca subsp. vesca]
Length = 838
Score = 328 bits (842), Expect = 6e-88
Identities = 163/213 (76%), Positives = 184/213 (86%), Gaps = 1/213 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK YI DIR
Sbjct: 477 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKEYIGDIRA 536
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F S+D K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV + P+S+
Sbjct: 537 AYTKDFTSRDAAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIPPNSL 596
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+F+FLGKDSIRY NTV V+P VYK I +F++ K+DSDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 597 EFNFLGKDSIRYENTVEVEPAVYKEIKKFQEGKKDSDDLFDKLDTSKLNAHLKELMPGLT 656
Query: 543 AKVFRTYNASITLD-RLLQETEGVDIPQKVAAY 638
AKVFRTYNASITLD L QET D+ +K Y
Sbjct: 657 AKVFRTYNASITLDNELNQETTEGDVLKKKVFY 689
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 328 bits (842), Expect = 6e-88
Identities = 164/215 (76%), Positives = 186/215 (86%), Gaps = 2/215 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI +IR
Sbjct: 529 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRA 588
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPS-S 359
Y + SKD TKKQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + S +
Sbjct: 589 AYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPGSFN 648
Query: 360 IQFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGL 539
++FDFLGKDSIRY NTV VKPEVY+AIG F+K K+ +DDLFD+LDT+KLN HLKELMPGL
Sbjct: 649 LKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELMPGL 708
Query: 540 TAKVFRTYNASITLD-RLLQETEGVDIPQKVAAYQ 641
TAKVFRTYNASITLD +L +ETE D+ +KV YQ
Sbjct: 709 TAKVFRTYNASITLDEKLYEETEDGDVAEKVVIYQ 743
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 328 bits (840), Expect = 1e-87
Identities = 160/213 (75%), Positives = 183/213 (85%), Gaps = 1/213 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI +IR
Sbjct: 516 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRA 575
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 576 AYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKL 635
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRY NTV V+ VYKAIG F+ K+ +DDLFD LDTSKLN HLKELMPGLT
Sbjct: 636 KFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLT 695
Query: 543 AKVFRTYNASITLD-RLLQETEGVDIPQKVAAY 638
AKVFRTYNASITLD +L +ETE D+ +K+ Y
Sbjct: 696 AKVFRTYNASITLDEKLYEETEDGDVAEKIVIY 728
>ref|XP_001773082.1| predicted protein [Physcomitrella patens]
gi|162675629|gb|EDQ62122.1| predicted protein
[Physcomitrella patens]
Length = 502
Score = 327 bits (839), Expect = 1e-87
Identities = 159/213 (74%), Positives = 183/213 (85%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLAYW DPIN KEFKYVFLAASS+LKG SD KYEKAR LK+YI++IR+
Sbjct: 142 WKEVRHDNTVTWLAYWKDPINDKEFKYVFLAASSSLKGQSDMLKYEKARTLKDYIDNIRR 201
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F S D TK+QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V+L+ P S+
Sbjct: 202 TYTKDFSSSDPTKQQIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVSLIAPKSL 261
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V VYKAIG+FKK K+ DDLF+ LDT+KLN HLK +MPGLT
Sbjct: 262 QFDFLGKDSIRYFNTVEVDERVYKAIGQFKKGKKGGDDLFERLDTTKLNLHLKGIMPGLT 321
Query: 543 AKVFRTYNASITLDRLLQETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD LLQ+T G + +A YQ
Sbjct: 322 AKVFRTYNASITLDTLLQDTRGETTIEIIADYQ 354
>ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]
gi|9758163|dbj|BAB08548.1| DNA topoisomerase I
[Arabidopsis thaliana] gi|110741973|dbj|BAE98926.1| DNA
topoisomerase I like protein [Arabidopsis thaliana]
gi|332009232|gb|AED96615.1| DNA topoisomerase 1 beta
[Arabidopsis thaliana]
Length = 917
Score = 327 bits (837), Expect = 2e-87
Identities = 160/214 (74%), Positives = 184/214 (85%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+W+DPINPKEFKYVFLAASS+LKG SDKEKYEKAR L N+I IR
Sbjct: 550 WKEVKHDNTVTWLAFWSDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRA 609
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 610 AYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 669
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLNTHLKELM GLT
Sbjct: 670 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLT 729
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET D+P+KV YQ
Sbjct: 730 AKVFRTYNASITLDLMLSKETRDGDVPEKVVVYQ 763
>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
Length = 733
Score = 327 bits (837), Expect = 2e-87
Identities = 160/214 (74%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 416 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 475
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 476 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 535
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 536 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 595
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET+ D+ +KV YQ
Sbjct: 596 AKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQ 629
>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao]
Length = 836
Score = 327 bits (837), Expect = 2e-87
Identities = 160/214 (74%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 543 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET+ D+ +KV YQ
Sbjct: 723 AKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQ 756
>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao]
Length = 904
Score = 327 bits (837), Expect = 2e-87
Identities = 160/214 (74%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 543 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET+ D+ +KV YQ
Sbjct: 723 AKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQ 756
>ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Capsella rubella]
gi|482548682|gb|EOA12876.1| hypothetical protein
CARUB_v10025848mg [Capsella rubella]
Length = 915
Score = 327 bits (837), Expect = 2e-87
Identities = 160/214 (74%), Positives = 183/214 (85%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR L N+I IR
Sbjct: 548 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRA 607
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 608 AYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 667
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKELM GLT
Sbjct: 668 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKADDLFDELDTSKLNAHLKELMAGLT 727
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET D+P+KV YQ
Sbjct: 728 AKVFRTYNASITLDLMLSKETRDGDVPEKVVVYQ 761
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 325 bits (832), Expect = 9e-87
Identities = 159/214 (74%), Positives = 187/214 (87%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPI+ K+FKYVFLAASSALKG SDKEKYEK+R LK++I IR
Sbjct: 550 WKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHIHKIRD 609
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKDKTKKQIAVATYLID+LALRAGNEKDDDEA+TVGCCTLKV+NV V P+++
Sbjct: 610 TYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVDNVTCVPPNNL 669
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V+ VYKAI EF+ K+ DDLFD+LDT++LN HLK+LMPGLT
Sbjct: 670 QFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPGDDLFDKLDTTRLNAHLKDLMPGLT 729
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ETE + +K+A YQ
Sbjct: 730 AKVFRTYNASITLDDILHKETEDGTLLEKIAVYQ 763
>ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata]
gi|297311921|gb|EFH42345.1| TOP1BETA [Arabidopsis lyrata
subsp. lyrata]
Length = 922
Score = 324 bits (831), Expect = 1e-86
Identities = 160/214 (74%), Positives = 184/214 (85%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+W DPIN KEFKYVFLA SSA+KGLSDKEKYEKAR L ++I++IR
Sbjct: 556 WKEVKHDNTVTWLAFWVDPINQKEFKYVFLAPSSAMKGLSDKEKYEKARNLTDHIDNIRT 615
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ NF +KD T KQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ I
Sbjct: 616 TYTKNFTAKDVTTKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKI 675
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKEL+PGLT
Sbjct: 676 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLT 735
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L QET+ D+ QK+ YQ
Sbjct: 736 AKVFRTYNASITLDEMLSQETKDGDLNQKIVVYQ 769
>gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
Length = 790
Score = 323 bits (829), Expect = 2e-86
Identities = 161/214 (75%), Positives = 184/214 (85%), Gaps = 1/214 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPIN +EFKYVFLA SS+LKG SDKEKYEKARMLK+YI +IR
Sbjct: 429 WKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKARMLKDYIGNIRA 488
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV + P+S+
Sbjct: 489 AYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIAPNSL 548
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+F+FLGKDSIRY NTV V+ VYKAI +F+ KR DDLFD LDTSKLN HLKELMPGLT
Sbjct: 549 EFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRGCDDLFDRLDTSKLNAHLKELMPGLT 608
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQKVAAYQ 641
AKVFRTYNASITLD +L +ET+ D+ +KV YQ
Sbjct: 609 AKVFRTYNASITLDNILNKETKEGDLSEKVVVYQ 642