BLASTX nr result
ID: Ephedra28_contig00007925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00007925
(1716 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ... 437 e-120
gb|ESW31567.1| hypothetical protein PHAVU_002G248800g [Phaseolus... 434 e-119
ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutr... 433 e-118
gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus pe... 432 e-118
ref|NP_192184.1| pentatricopeptide repeat-containing protein [Ar... 430 e-117
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 429 e-117
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-116
ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Caps... 425 e-116
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 425 e-116
ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containi... 424 e-116
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 423 e-115
gb|ABR17838.1| unknown [Picea sitchensis] 423 e-115
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi... 422 e-115
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,... 422 e-115
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein... 421 e-115
ref|XP_002324099.1| hypothetical protein POPTR_0017s12720g [Popu... 420 e-115
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe... 420 e-114
ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat... 419 e-114
gb|EOX91314.1| Pentatricopeptide repeat (PPR) superfamily protei... 419 e-114
ref|XP_002308737.1| pentatricopeptide repeat-containing family p... 418 e-114
>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318652|gb|EFH49074.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 776
Score = 437 bits (1123), Expect = e-120
Identities = 230/549 (41%), Positives = 325/549 (59%), Gaps = 30/549 (5%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
RQ FD M R + SWN +I+ A +G EA QLF+ +H N
Sbjct: 234 RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE---SPVHDVFTWTAMVSGYIQN- 289
Query: 1536 KWLEKGRELHFEARQHGIEV----------------------------NTQVGSSLVGFY 1441
+ +E+ REL F+ EV N ++++ Y
Sbjct: 290 RMVEEAREL-FDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGY 348
Query: 1440 CKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFS 1261
+CG + A+ +FD MP +D V+W ++I Y +G A+ LFV M +G RS+FS
Sbjct: 349 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFS 408
Query: 1260 AIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEG 1081
+ ++ LE GKQ H +V G + + L MY K +F++ G
Sbjct: 409 SALSTCADVVA-LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 467
Query: 1080 KSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDY 901
K + SW +I G S+HG +E LR FE+M R GLKP+D + VL AC+ TGLV +G Y
Sbjct: 468 KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 527
Query: 900 FDSMSRVYGLNPSNQHIGFMTELLGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHG 727
F +M++ YG+ P++QH M +LLGR+ E A L+ MP +P WGTLL A ++HG
Sbjct: 528 FHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587
Query: 726 NTELAKVAADQLFQMKDQKPPAYVMLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWI 547
NTELA+ AAD++F M+ + YV+LSN+YA G+W +V ++R M+DKG+KK PG SWI
Sbjct: 588 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647
Query: 546 EVKNTTHLFFVGDKAHPQSDEIYGTLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQH 367
E++N TH F VGD+ HP+ DEI+ L L +M++ G+ TS LHDV++E+KE +V++
Sbjct: 648 EIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRY 707
Query: 366 HCEKLAIAFGLMSTSHGTPLRVLKNMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFAD 187
H E+LA+A+G+M S G P+RV+KN+RVC DCHNA+KYM+KV+GR IILRDNNRFHHF D
Sbjct: 708 HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKD 767
Query: 186 GACSCGDYW 160
G+CSCGDYW
Sbjct: 768 GSCSCGDYW 776
Score = 84.3 bits (207), Expect = 1e-13
Identities = 88/382 (23%), Positives = 152/382 (39%), Gaps = 2/382 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R +FD+M R L SWN MI + +A +LF M +
Sbjct: 110 RMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDV----------------C 153
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
W ++++ Y + G +D+AR+VFD MP K+ V+WN+L+
Sbjct: 154 SW-----------------------NTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALL 190
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
AY+ N + A LF N +++ ++ GFVKK +E
Sbjct: 191 SAYVQNSKLEEACVLFGSRENWALV----SWNCLLGGFVKKKKIVEA------------- 233
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ F++ +KV + + SW +ITG +Q+G E +LF+
Sbjct: 234 -----------------RQFFDSMKV------RDVVSWNTIITGYAQNGEIDEARQLFDE 270
Query: 996 MVRSGLKPNDEIF--LCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR 823
P ++F ++ + +V+E + FD M ++ + G++ G
Sbjct: 271 ------SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ---GE 321
Query: 822 SSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSN 643
E A++L MP + V W T++ G AK D +M + P ++ +
Sbjct: 322 RVEMAKELFDVMPCRNV-STWNTMITGYAQCGKISEAKNLFD---KMPKRDPVSWAAMIA 377
Query: 642 IYAQDGKWDEVARVRQLMKDKG 577
Y+Q G E R+ LM+ +G
Sbjct: 378 GYSQSGHSYEALRLFVLMEREG 399
>gb|ESW31567.1| hypothetical protein PHAVU_002G248800g [Phaseolus vulgaris]
gi|561032989|gb|ESW31568.1| hypothetical protein
PHAVU_002G248800g [Phaseolus vulgaris]
Length = 641
Score = 434 bits (1115), Expect = e-119
Identities = 217/521 (41%), Positives = 320/521 (61%), Gaps = 2/521 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R++FD+M R + +W +MI+ A + +AL LF M+ G +
Sbjct: 123 RRMFDEMPCRDMVTWTSMITGYAQNESANDALVLFPKMLREGARPNEFTLSSLVKCCGFI 182
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
GR++H ++G N VGSSLV Y +CG+L AR VFD + K+ V+WN+LI
Sbjct: 183 ASYGYGRQIHACCWKYGCYSNVFVGSSLVDMYARCGYLGEARSVFDELGCKNEVSWNALI 242
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
Y G+ A+ +FV+M +GY P T+SA++ GCLEQGK HA ++ G
Sbjct: 243 TGYARKGEGEEALAMFVRMQREGYRPTEFTYSALLCS-CSSMGCLEQGKWLHAHLMKSGR 301
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ + L MY K+ W+ KVF K + S +++ G +QHG+ +E ++ FE
Sbjct: 302 KLVGYVGNTLLHMYTKSGSIWDAEKVFGKLGKIDVVSCNSMLIGYAQHGLGREAVQHFEE 361
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS 817
M+R G+ PND FL VL AC+R L+ EG YF M R Y + P H + +LLGR+
Sbjct: 362 MIRFGIVPNDITFLSVLTACSRARLLDEGKHYFGLM-RKYHIEPEVSHYATIVDLLGRAG 420
Query: 816 --EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSN 643
+ A+ I +MP +P G WG LL ACKMH NTE+ AA ++F++ P + +L+N
Sbjct: 421 LLDQAKSFIEEMPIEPTGAIWGALLGACKMHKNTEMGAYAAQRVFELDPSYPGTHTLLAN 480
Query: 642 IYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYK 463
IYA G+W++VA+VR++MK+ GLKKEP CSW+E++N+ H+F D AHPQ D+I+ +
Sbjct: 481 IYASAGRWEDVAKVRKIMKNSGLKKEPACSWVEIENSVHVFVANDLAHPQKDKIHKMWEE 540
Query: 462 LYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRV 283
L +++E+G+ P TS VD ++KEL +Q+H EKLA+AF L++T G+ +R++KN+RV
Sbjct: 541 LNQKIKEIGYVPDTSHVHLFVDQQEKELNLQYHSEKLALAFALLNTPPGSIIRIMKNIRV 600
Query: 282 CGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
CGDCH+A+KY+S V R+I++RD NRFHH DG+CSCGDYW
Sbjct: 601 CGDCHSAIKYVSLVVKREIVVRDTNRFHHIRDGSCSCGDYW 641
Score = 124 bits (310), Expect = 2e-25
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L +G+ +HF + + + +S++ Y +CG L++AR++FD MP +D V W S+I
Sbjct: 84 LREGKLVHFHILNSEFKNDLVIQNSVLFMYARCGSLEDARRMFDEMPCRDMVTWTSMITG 143
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFSAII--TGFVKKGGCLEQGKQTHALVVHRGL 1177
Y N N+A+ LF KM+ +G P T S+++ GF+ G G+Q HA G
Sbjct: 144 YAQNESANDALVLFPKMLREGARPNEFTLSSLVKCCGFIASYG---YGRQIHACCWKYGC 200
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ + S L DMY + VF++ K+ SW A+ITG ++ G +E L +F
Sbjct: 201 YSNVFVGSSLVDMYARCGYLGEARSVFDELGCKNEVSWNALITGYARKGEGEEALAMFVR 260
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEG 910
M R G +P + + +L +C+ G +++G
Sbjct: 261 MQREGYRPTEFTYSALLCSCSSMGCLEQG 289
>ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutrema salsugineum]
gi|557089963|gb|ESQ30671.1| hypothetical protein
EUTSA_v10011302mg [Eutrema salsugineum]
Length = 650
Score = 433 bits (1114), Expect = e-118
Identities = 228/544 (41%), Positives = 323/544 (59%), Gaps = 25/544 (4%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFN-----------GMVGGGIHXXXXX 1570
RQ FD M+ R + SWN +IS A +G EA +LF+ MV G +
Sbjct: 108 RQFFDSMNVRDVVSWNTIISGYAQNGEIVEARKLFDESPVQDVFTWTAMVSGYVQNRMVE 167
Query: 1569 XXXXXXXXA----NLKW------LEKGRELHFEARQHGIEV--NTQVGSSLVGFYCKCGW 1426
+ W +G + I N ++++ Y +CG
Sbjct: 168 EARELFDKMPERNEVSWNAMLAGYVQGERMELAKELFDIMPFRNVSTWNTMITGYAQCGD 227
Query: 1425 LDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITG 1246
+ A+++FD MP +D V+W ++I Y G A+ LFV+M +G RS+FS+ ++
Sbjct: 228 VSEAKKLFDKMPKRDPVSWAAMIAGYSQCGHGYEALRLFVQMEREGGRLNRSSFSSALST 287
Query: 1245 FVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDS 1066
LE GKQ H +V G + + L MY K +FE+ GK + S
Sbjct: 288 CADVVA-LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAYDLFEEMTGKDIVS 346
Query: 1065 WTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMS 886
W +I G S+HG +E LR FE+M R GLKP+D + VL AC+ TGLV +G YF +M+
Sbjct: 347 WNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATLVAVLSACSHTGLVDKGRQYFYTMT 406
Query: 885 RVYGLNPSNQHIGFMTELLGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELA 712
+ +G+ P++QH M +LLGR+ E A L+ MP +P G WGTLL A ++HGNTELA
Sbjct: 407 QDFGVTPNSQHYACMVDLLGRAGFLEEAHNLMKNMPFEPDGAIWGTLLGASRVHGNTELA 466
Query: 711 KVAADQLFQMKDQKPPAYVMLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNT 532
+ AAD++F M+ + YV+LSN+YA G+W +V ++R M+DKG+KK PG SWIE++N
Sbjct: 467 ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRLKMRDKGVKKVPGYSWIEIQNK 526
Query: 531 THLFFVGDKAHPQSDEIYGTLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKL 352
TH F VGD+ HP+ DEIY L L +M++ G+ TS LHDV++E+KE +V++H E+L
Sbjct: 527 THTFSVGDEFHPEKDEIYAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKECMVRYHSERL 586
Query: 351 AIAFGLMSTSHGTPLRVLKNMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSC 172
A+A+G+M S G P+RV+KN+RVC DCHNA+K M+KV+GR IILRDNNRFHHF DG+CSC
Sbjct: 587 AVAYGIMRVSSGKPIRVMKNLRVCEDCHNAIKCMAKVTGRLIILRDNNRFHHFKDGSCSC 646
Query: 171 GDYW 160
GDYW
Sbjct: 647 GDYW 650
Score = 79.7 bits (195), Expect = 4e-12
Identities = 85/361 (23%), Positives = 140/361 (38%), Gaps = 26/361 (7%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLF-----------NGMVGGGIHXXXXX 1570
R+VFD+M + SWN ++SA + +EA +LF N ++GG +
Sbjct: 46 RRVFDRMPEKNEVSWNALLSAYVQNSRMEEACRLFRSRENWALVSWNCLLGGFVKKKMIV 105
Query: 1569 XXXXXXXXANLKWLEKGRELHFEARQHGIEVNTQ------------VGSSLVGFYCKCGW 1426
N++ + + Q+G V + +++V Y +
Sbjct: 106 EARQFFDSMNVRDVVSWNTIISGYAQNGEIVEARKLFDESPVQDVFTWTAMVSGYVQNRM 165
Query: 1425 LDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITG 1246
++ AR++FD MP ++ V+WN+++ Y+ + A ELF M + ST++ +ITG
Sbjct: 166 VEEARELFDKMPERNEVSWNAMLAGYVQGERMELAKELFDIMPFRNV----STWNTMITG 221
Query: 1245 FVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDS 1066
+ + G D K+F+K + S
Sbjct: 222 YAQCG------------------------------------DVSEAKKLFDKMPKRDPVS 245
Query: 1065 WTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMS 886
W A+I G SQ G E LRLF M R G + N F L C ++ G +
Sbjct: 246 WAAMIAGYSQCGHGYEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL- 304
Query: 885 RVYGLNPSNQHIGFMTELL---GRSSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTEL 715
V G + +G L+ S E A L +M K + +W T++ HG E
Sbjct: 305 -VKGGYETGCFVGNALLLMYCKCGSIEEAYDLFEEMTGKDI-VSWNTMIAGYSRHGFGEE 362
Query: 714 A 712
A
Sbjct: 363 A 363
Score = 78.6 bits (192), Expect = 8e-12
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 2/320 (0%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L K REL FE+ E + ++++ Y + G +D AR+VFD MP K+ V+WN+L+ A
Sbjct: 11 LGKAREL-FESMP---ERDVCSWNTILSGYAQNGCVDEARRVFDRMPEKNEVSWNALLSA 66
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGG 1171
Y+ N + A LF N +++ ++ GFVKK
Sbjct: 67 YVQNSRMEEACRLFRSRENWALV----SWNCLLGGFVKK--------------------- 101
Query: 1170 DSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMV 991
M ++ + F++ + V + + SW +I+G +Q+G E +LF+
Sbjct: 102 ---------KMIVEARQFFDSMNV------RDVVSWNTIISGYAQNGEIVEARKLFDE-- 144
Query: 990 RSGLKPNDEIF--LCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS 817
P ++F ++ + +V+E + FD M ++ + G++ G
Sbjct: 145 ----SPVQDVFTWTAMVSGYVQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ---GERM 197
Query: 816 EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSNIY 637
E A++L MP + V W T++ G+ AK D +M + P ++ + Y
Sbjct: 198 ELAKELFDIMPFRNV-STWNTMITGYAQCGDVSEAKKLFD---KMPKRDPVSWAAMIAGY 253
Query: 636 AQDGKWDEVARVRQLMKDKG 577
+Q G E R+ M+ +G
Sbjct: 254 SQCGHGYEALRLFVQMEREG 273
>gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus persica]
Length = 563
Score = 432 bits (1111), Expect = e-118
Identities = 212/523 (40%), Positives = 326/523 (62%), Gaps = 4/523 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R +FD+M ++ L +W +IS + + PQ+AL LF M+ G+ +
Sbjct: 43 RNLFDQMPSKDLVTWTALISGYSQYDRPQDALVLFPQMLLRGLEPNQFTLSSLFKAAGAV 102
Query: 1536 KW--LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNS 1363
+ GR+LH ++G + N VG+SLV Y + G +D ++ +FD++ TK+ V+WN+
Sbjct: 103 SDDNNKHGRQLHAYCLKYGFDTNVYVGTSLVDMYARWGHMDESQLIFDSLETKNEVSWNA 162
Query: 1362 LIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHR 1183
LI + +A+ LF KM+ +G+ P T+S++ T G +EQGK HA ++
Sbjct: 163 LIAGHARKAQGEHALRLFWKMLREGFKPTHFTYSSVFTACASAGS-MEQGKWVHAHMIKS 221
Query: 1182 GLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLF 1003
G + + + L DMY K+ + KVF++ + + SW +++TG +QHG+ QE ++ F
Sbjct: 222 GAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDIVSWNSMLTGYAQHGLGQETVQRF 281
Query: 1002 ENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR 823
E M+R G++PND FLCVL AC+ GL+ EG YFD M + Y + H + +LLGR
Sbjct: 282 EEMLRIGIQPNDITFLCVLTACSHAGLLDEGQYYFDLM-KSYNIELQISHYVTIVDLLGR 340
Query: 822 SS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVML 649
+ + A K I +MP +P WG LL AC+MH N +L AA+++F++ +V+L
Sbjct: 341 AGLLDRAAKFIREMPIEPTAAVWGALLGACRMHKNIDLGAYAAERVFELDPHDSGPHVLL 400
Query: 648 SNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTL 469
SNIYA G+ + ARVR+LMKD G+KKEP CSW+E++N H+F D AHPQ EI
Sbjct: 401 SNIYASAGRLSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMW 460
Query: 468 YKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNM 289
+ G+++++G+ P TS L VD +++E+ +Q+H EKLA+AF L++T+ G+ +R+ KN+
Sbjct: 461 ETISGKIKDIGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNI 520
Query: 288 RVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
RVCGDCH+A+KY+SKV GR+II+RD NRFHHF +G+CSC DYW
Sbjct: 521 RVCGDCHSAIKYVSKVEGREIIVRDTNRFHHFRNGSCSCRDYW 563
Score = 110 bits (274), Expect = 2e-21
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 11/279 (3%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L++ R +H + + + ++++ Y KCG L++AR +FD MP+KD V W +LI
Sbjct: 4 LQQARIVHAHILTSHFKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALISG 63
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCL-----EQGKQTHALVVH 1186
Y +A+ LF +M+ +G P + T S++ K G + + G+Q HA +
Sbjct: 64 YSQYDRPQDALVLFPQMLLRGLEPNQFTLSSLF----KAAGAVSDDNNKHGRQLHAYCLK 119
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
G + + + L DMY + +F+ E K+ SW A+I G ++ + LRL
Sbjct: 120 YGFDTNVYVGTSLVDMYARWGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRL 179
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELL- 829
F M+R G KP + V AC G +++G + + + + F+ L
Sbjct: 180 FWKMLREGFKPTHFTYSSVFTACASAGSMEQG-----KWVHAHMIKSGAKLVAFVGNTLL 234
Query: 828 -----GRSSEAAEKLISQMPNKPVGDAWGTLLNACKMHG 727
S E A K+ ++ + + +W ++L HG
Sbjct: 235 DMYAKSGSIEDARKVFDRLVRQDI-VSWNSMLTGYAQHG 272
>ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g02750 gi|4263522|gb|AAD15348.1| hypothetical protein
[Arabidopsis thaliana] gi|7269760|emb|CAB77760.1|
hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 430 bits (1105), Expect = e-117
Identities = 229/560 (40%), Positives = 327/560 (58%), Gaps = 41/560 (7%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFN-----------GMVGGGIHXXXXX 1570
RQ FD M+ R + SWN +I+ A G EA QLF+ MV G I
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN---- 294
Query: 1569 XXXXXXXXANLKWLEKGRELHFEARQHGIEV----------------------------N 1474
+ +E+ REL F+ EV N
Sbjct: 295 -----------RMVEEAREL-FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 1473 TQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMIN 1294
++++ Y +CG + A+ +FD MP +D V+W ++I Y +G A+ LFV+M
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 1293 QGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFW 1114
+G RS+FS+ ++ LE GKQ H +V G + + L MY K
Sbjct: 403 EGGRLNRSSFSSALSTCADVVA-LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 1113 NCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACT 934
+F++ GK + SW +I G S+HG + LR FE+M R GLKP+D + VL AC+
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 933 RTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS--EAAEKLISQMPNKPVGDAW 760
TGLV +G YF +M++ YG+ P++QH M +LLGR+ E A L+ MP +P W
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 759 GTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSNIYAQDGKWDEVARVRQLMKDK 580
GTLL A ++HGNTELA+ AAD++F M+ + YV+LSN+YA G+W +V ++R M+DK
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 579 GLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYKLYGQMRELGFKPTTSFALHDV 400
G+KK PG SWIE++N TH F VGD+ HP+ DEI+ L +L +M++ G+ TS LHDV
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701
Query: 399 DDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRVCGDCHNAVKYMSKVSGRQIIL 220
++E+KE +V++H E+LA+A+G+M S G P+RV+KN+RVC DCHNA+KYM++++GR IIL
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761
Query: 219 RDNNRFHHFADGACSCGDYW 160
RDNNRFHHF DG+CSCGDYW
Sbjct: 762 RDNNRFHHFKDGSCSCGDYW 781
Score = 83.6 bits (205), Expect = 2e-13
Identities = 87/391 (22%), Positives = 168/391 (42%), Gaps = 16/391 (4%)
Frame = -1
Query: 1701 KMHNRGLSSWNNMISACAHHGYPQEALQLF-----------NGMVGGGIHXXXXXXXXXX 1555
K + + WN IS+ G EAL++F NGM+ G +
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE------- 110
Query: 1554 XXXANLKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAV 1375
E R+L E + + V+ V ++ Y + L AR++F+ MP +D
Sbjct: 111 --------FELARKLFDEMPERDL-VSWNV---MIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 1374 AWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERS--TFSAIITGFVKKGGCLEQGKQTH 1201
+WN+++ Y NG V++A +F +M PE++ +++A+++ +V + K
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM------PEKNDVSWNALLSAYV------QNSKMEE 206
Query: 1200 ALVVHRGLGGDSMIA-SYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMS 1024
A ++ + ++++ + L ++K K + F+ + + SW +ITG +Q G
Sbjct: 207 ACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 1023 QEVLRLFENMVRSGLKPNDEIF--LCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHI 850
E +LF+ P ++F ++ + +V+E + FD M ++ +
Sbjct: 267 DEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLA 320
Query: 849 GFMTELLGRSSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQK 670
G++ G E A++L MP + V W T++ G AK D +M +
Sbjct: 321 GYVQ---GERMEMAKELFDVMPCRNV-STWNTMITGYAQCGKISEAKNLFD---KMPKRD 373
Query: 669 PPAYVMLSNIYAQDGKWDEVARVRQLMKDKG 577
P ++ + Y+Q G E R+ M+ +G
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 429 bits (1102), Expect = e-117
Identities = 215/521 (41%), Positives = 318/521 (61%), Gaps = 2/521 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R++FD+M +R + SW +MI+ A + +AL LF M+ G +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
GR++H ++G N VGSSLV Y +CG+L A VFD + K+ V+WN+LI
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
Y G+ A+ LFV+M +GY P T+SA+++ GCLEQGK HA ++
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS-CSSMGCLEQGKWLHAHLMKSSQ 307
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ + L MY K+ + KVF+K + S +++ G +QHG+ +E + F+
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS 817
M+R G++PND FL VL AC+ L+ EG YF M R Y + P H + +LLGR+
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAG 426
Query: 816 --EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSN 643
+ A+ I +MP +P WG LL A KMH NTE+ AA ++F++ P + +L+N
Sbjct: 427 LLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLAN 486
Query: 642 IYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYK 463
IYA G+W++VA+VR++MKD G+KKEP CSW+EV+N+ H+F D AHPQ ++I+ K
Sbjct: 487 IYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEK 546
Query: 462 LYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRV 283
L +++E+G+ P TS L VD ++KEL +Q+H EKLA++F L++T G+ +R++KN+RV
Sbjct: 547 LNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRV 606
Query: 282 CGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
CGDCH+A+KY+S V R+II+RD NRFHHF DG CSCGDYW
Sbjct: 607 CGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 125 bits (315), Expect = 4e-26
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 8/291 (2%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L++G+ +HF + + + +SL+ Y +CG L+ AR++FD MP +D V+W S+I
Sbjct: 90 LKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITG 149
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFSAII--TGFVKKGGCLEQGKQTHALVVHRGL 1177
Y N ++A+ LF +M++ G P T S+++ G++ C G+Q HA G
Sbjct: 150 YAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNC---GRQIHACCWKYGC 206
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ + S L DMY + + VF+K K+ SW A+I G ++ G +E L LF
Sbjct: 207 HSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVR 266
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELL---- 829
M R G +P + + +L +C+ G +++G + + S + +G++ L
Sbjct: 267 MQREGYRPTEFTYSALLSSCSSMGCLEQG-----KWLHAHLMKSSQKLVGYVGNTLLHMY 321
Query: 828 --GRSSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQM 682
S AEK+ ++ V ++L HG L K AA Q +M
Sbjct: 322 AKSGSIRDAEKVFDKLVKVDVVSC-NSMLIGYAQHG---LGKEAAQQFDEM 368
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 426 bits (1094), Expect = e-116
Identities = 212/522 (40%), Positives = 322/522 (61%), Gaps = 3/522 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHG-YPQEALQLFNGMVGGGIHXXXXXXXXXXXXXAN 1540
R++FD++ + + SW MI+ G Y +EAL LF GM+ + AN
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
L L G ++ A + G V +SL+ Y + G +D+AR+ FD + K+ +++N++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I AY N + A+ELF ++ +QG TF+++++G G + +G+Q HA V+ G
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG-TIGKGEQIHARVIKSG 507
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
L + + + L MY + + + +VFE E +++ SWT++ITG ++HG + + L LF
Sbjct: 508 LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567
Query: 999 NMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRS 820
M+ G++PN ++ VL AC+ GLV EG +F SM +G+ P +H M ++LGRS
Sbjct: 568 KMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRS 627
Query: 819 SEAAEKL--ISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLS 646
+E + I+ MP K W T L AC++HGN EL K AA + + + P AY++LS
Sbjct: 628 GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLS 687
Query: 645 NIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLY 466
N+YA KWDEV+ +R+ MK+K L KE GCSW+EV+N H F+VGD +HP++ EIY L
Sbjct: 688 NLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQ 747
Query: 465 KLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMR 286
L ++++LG+ P F LHDV++EQKE L+ H EK+A+AFGL+STS P+RV KN+R
Sbjct: 748 NLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLR 807
Query: 285 VCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
+CGDCH+A+KY+S +GR+II+RD NRFHH DG CSC +YW
Sbjct: 808 ICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 110 bits (274), Expect = 2e-21
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 6/335 (1%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
+VF+KM R +W MI+ GY EA+ LF M+ G AN++
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 1533 WLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKC---GWLDNARQVFDNMPTKDAVAWNS 1363
L G++LH +A +HG+ ++ VG L+ Y KC G + AR++FD + + +W +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 1362 LIVAYLDNGDVN-NAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVH 1186
+I Y+ G + A++LF MI P TFS+ + L G+Q V
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL-AALRIGEQVFTHAVK 404
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
G + +A+ L MY ++ + K F+ K+L S+ VI +++ S+E L L
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLG 826
F + G+ + F +L G + +G + + GL + + +
Sbjct: 465 FNEIEDQGMGASAFTFASLLSGAASIGTIGKG-EQIHARVIKSGLKLNQSVCNALISMYS 523
Query: 825 R--SSEAAEKLISQMPNKPVGDAWGTLLNACKMHG 727
R + E+A ++ M ++ V +W +++ HG
Sbjct: 524 RCGNIESAFQVFEDMEDRNV-ISWTSIITGFAKHG 557
Score = 108 bits (269), Expect = 9e-21
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 6/271 (2%)
Frame = -1
Query: 1692 NRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLKWLEKGRE 1513
+R L SW+ M+S A++ AL F M+ G + + +++ G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189
Query: 1512 LH-FEARQHGIEVNTQVGSSLVGFYCKC-GWLDNARQVFDNMPTKDAVAWNSLIVAYLDN 1339
+ F + ++ + VG L+ + K G L +A +VF+ MP ++AV W +I +
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 1338 GDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMI 1159
G A++LF++MI GY P+R T S +I+ L G+Q H+ + GL D +
Sbjct: 250 GYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM-ELLLLGQQLHSQAIRHGLTLDRCV 308
Query: 1158 ASYLADMYLK-NKDFWNCL--KVFEKTEGKSLDSWTAVITGLSQH-GMSQEVLRLFENMV 991
L +MY K + D C K+F++ ++ SWTA+ITG Q G +E L LF M+
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI 368
Query: 990 RSGLKPNDEIFLCVLQACTRTGLVKEGLDYF 898
+ + PN F L+AC ++ G F
Sbjct: 369 LTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
>ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Capsella rubella]
gi|482558914|gb|EOA23106.1| hypothetical protein
CARUB_v10003899mg [Capsella rubella]
Length = 756
Score = 425 bits (1093), Expect = e-116
Identities = 224/548 (40%), Positives = 324/548 (59%), Gaps = 29/548 (5%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFN-----------GMVGGGIHXXXXX 1570
RQ FD M R + SWN +I+ A +G EA QLF+ MV G I
Sbjct: 214 RQFFDSMKVRDVVSWNTIITGYAQNGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 273
Query: 1569 XXXXXXXXA----NLKW------------LEKGRELHFEARQHGIEVNTQVGSSLVGFYC 1438
+ W +E +EL F+ N ++++ +
Sbjct: 274 EARELFDNMPERNEVSWNAMLAGYVQGERMEMAKEL-FDVMPCR---NVSTWNTMITGFS 329
Query: 1437 KCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSA 1258
+CG + A+ +FD MP +D V+W ++I Y +G A+ LFV+M +G RS+FS+
Sbjct: 330 QCGKISEAKNLFDKMPMRDPVSWAAMISGYSQSGHSYEALRLFVQMEREGGRLNRSSFSS 389
Query: 1257 IITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGK 1078
++ LE GKQ H +V G + + L MY K +F++ GK
Sbjct: 390 ALSTCADVVA-LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMNGK 448
Query: 1077 SLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYF 898
+ SW +I G S+HG +E LR FE+M R GLKP+D + VL AC+ TGLV +G YF
Sbjct: 449 DIVSWNTLIAGYSRHGFGEEALRFFESMKREGLKPDDATLVAVLSACSHTGLVDKGRQYF 508
Query: 897 DSMSRVYGLNPSNQHIGFMTELLGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGN 724
+M++ YG+ P++QH M +LLGR+ + A L+ +MP +P WGTLL A ++HGN
Sbjct: 509 YTMTQDYGVTPNSQHYACMVDLLGRAGLLDEAHNLMKKMPFEPDAAIWGTLLGASRVHGN 568
Query: 723 TELAKVAADQLFQMKDQKPPAYVMLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIE 544
T+LA+ AAD++F M+ + YV+LSNIYA G+W +V ++R M+DKG+KK PG SWIE
Sbjct: 569 TDLAETAADKIFAMEPENSGMYVLLSNIYASSGRWGDVGKLRVKMRDKGVKKVPGYSWIE 628
Query: 543 VKNTTHLFFVGDKAHPQSDEIYGTLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHH 364
++N TH F V D+ HP+ D+IY L L ++++ G+ TS LHDV++E+KE +V++H
Sbjct: 629 IQNKTHTFSVADEFHPEKDKIYAFLEDLELRIKKAGYVSKTSVVLHDVEEEEKERMVRYH 688
Query: 363 CEKLAIAFGLMSTSHGTPLRVLKNMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADG 184
E+LA+A+G+M G P+RV+KN+RVC DCHNA+KYM+K++GR IILRDNNRFHHF DG
Sbjct: 689 SERLAVAYGIMHVPSGRPIRVIKNLRVCEDCHNAIKYMAKITGRLIILRDNNRFHHFKDG 748
Query: 183 ACSCGDYW 160
+CSCGDYW
Sbjct: 749 SCSCGDYW 756
Score = 84.7 bits (208), Expect = 1e-13
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 4/311 (1%)
Frame = -1
Query: 1497 RQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAM 1318
R + N + L Y + L AR++F+ MP +D +WN+++ Y NG V++A
Sbjct: 93 RWSSVSYNAMISGYLRNGYVRNRNLGIARELFERMPERDVCSWNTMLSGYAQNGCVDDAR 152
Query: 1317 ELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG--LGGDSMIASYLA 1144
+F +M + + SA + + C G + + +V LGG
Sbjct: 153 RIFDRMPEKNEVSWNALLSAYVQNNKLEEACALFGSRENWALVSWNCLLGG--------- 203
Query: 1143 DMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDE 964
++K K + F+ + + + SW +ITG +Q+G E +LF+ P +
Sbjct: 204 --FVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGKIDEARQLFDE------SPVQD 255
Query: 963 IF--LCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSSEAAEKLISQ 790
+F ++ + +V+E + FD+M ++ + G++ G E A++L
Sbjct: 256 VFTWTAMVSGYIQNRMVEEARELFDNMPERNEVSWNAMLAGYVQ---GERMEMAKELFDV 312
Query: 789 MPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSNIYAQDGKWDEV 610
MP + V W T++ G AK D++ M+D P ++ + + Y+Q G E
Sbjct: 313 MPCRNV-STWNTMITGFSQCGKISEAKNLFDKM-PMRD--PVSWAAMISGYSQSGHSYEA 368
Query: 609 ARVRQLMKDKG 577
R+ M+ +G
Sbjct: 369 LRLFVQMEREG 379
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 425 bits (1093), Expect = e-116
Identities = 211/522 (40%), Positives = 323/522 (61%), Gaps = 3/522 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHG-YPQEALQLFNGMVGGGIHXXXXXXXXXXXXXAN 1540
R++FD++ + + SW MI+ G Y +EAL LF GM+ + AN
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
L L G ++ A + G V +SL+ Y + G +D+AR+ FD + K+ +++N++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I AY N + A+ELF ++ +QG TF+++++G G + +G+Q HA V+ G
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG-TIGKGEQIHARVIKSG 507
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
L + + + L MY + + + +VFE E +++ SWT++ITG ++HG + + L LF
Sbjct: 508 LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567
Query: 999 NMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRS 820
M+ G++PN+ ++ VL AC+ GLV EG +F SM +G+ P +H + ++LGRS
Sbjct: 568 KMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRS 627
Query: 819 SEAAEKL--ISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLS 646
+E + I+ MP K W T L AC++HGN EL K AA + + + P AY++LS
Sbjct: 628 GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLS 687
Query: 645 NIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLY 466
N+YA KWDEV+ +R+ MK+K L KE GCSW+EV+N H F+VGD +HP++ EIY L
Sbjct: 688 NLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQ 747
Query: 465 KLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMR 286
L ++++LG+ P F LHDV++EQKE L+ H EK+A+AFGL+STS P+RV KN+R
Sbjct: 748 NLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLR 807
Query: 285 VCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
+CGDCH+A+KY+S +GR+II+RD NRFHH DG CSC +YW
Sbjct: 808 ICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 110 bits (276), Expect = 1e-21
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 6/335 (1%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
+VF+KM R +W MI+ GY EA+ LF M+ G AN++
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 1533 WLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKC---GWLDNARQVFDNMPTKDAVAWNS 1363
L G++LH +A +HG+ ++ VG L+ Y KC G + AR++FD + + +W +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 1362 LIVAYLDNGDVN-NAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVH 1186
+I Y+ G + A++LF MI P TFS+ + L G+Q V
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL-AALRIGEQVFTHAVK 404
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
G + +A+ L MY ++ + K F+ K+L S+ VI +++ S+E L L
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLG 826
F + G+ + F +L G + +G + + GL + + +
Sbjct: 465 FNEIEDQGMGASAFTFASLLSGAASIGTIGKG-EQIHARVIKSGLKLNQSVCNALISMYS 523
Query: 825 R--SSEAAEKLISQMPNKPVGDAWGTLLNACKMHG 727
R + E+A ++ M ++ V +W +++ HG
Sbjct: 524 RCGNIESAFQVFEDMEDRNV-ISWTSIITGFAKHG 557
Score = 107 bits (266), Expect = 2e-20
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 6/271 (2%)
Frame = -1
Query: 1692 NRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLKWLEKGRE 1513
+R L SW+ M+S A++ AL F M+ G + + +++ G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189
Query: 1512 LH-FEARQHGIEVNTQVGSSLVGFYCKC-GWLDNARQVFDNMPTKDAVAWNSLIVAYLDN 1339
+ F + ++ + VG L+ + K G L +A +VF+ MP ++AV W +I +
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 1338 GDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMI 1159
G A++LF+ MI GY P+R T S +I+ L G+Q H+ + GL D +
Sbjct: 250 GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM-ELLLLGQQLHSQAIRHGLTLDRCV 308
Query: 1158 ASYLADMYLK-NKDFWNCL--KVFEKTEGKSLDSWTAVITGLSQH-GMSQEVLRLFENMV 991
L +MY K + D C K+F++ ++ SWTA+ITG Q G +E L LF M+
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI 368
Query: 990 RSGLKPNDEIFLCVLQACTRTGLVKEGLDYF 898
+ + PN F L+AC ++ G F
Sbjct: 369 LTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
>ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
[Oryza brachyantha]
Length = 637
Score = 424 bits (1090), Expect = e-116
Identities = 221/528 (41%), Positives = 314/528 (59%), Gaps = 9/528 (1%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMV---GGGIHXXXXXXXXXXXXX 1546
R +FD+M R SW+ ++SA A HG P AL L+ M G +
Sbjct: 112 RALFDRMPQRDHFSWSALVSAYARHGQPGAALALYRRMYEEPGNAVADNEFTASSALAAA 171
Query: 1545 ANLKWLEKGRELHFEARQHGIEV--NTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVA 1372
+ GRELH + GI+ + + S+L Y KCG +D+AR+VFD MP +DAV+
Sbjct: 172 TAARCARAGRELHCHVVRRGIDAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVS 231
Query: 1371 WNSLIVAYLDNGDVNNAMELFVKMINQG-YAPERSTFSAIITGFVKKGGCLEQ-GKQTHA 1198
W +++ Y D G LF+ M+ G P T++ ++ + +E G+Q H
Sbjct: 232 WTAMVERYFDGGRGGEGFRLFLHMLRAGGVRPNEFTYAGVLRACAEFA--VESFGRQVHG 289
Query: 1197 LVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQE 1018
+ G G S L MY K D N ++VFE T L SWTAVI+G +Q+G +E
Sbjct: 290 RMAKSGYGDSCFAESALVRMYSKCGDMGNAVRVFEATAKPDLVSWTAVISGYAQNGQPEE 349
Query: 1017 VLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMT 838
LR F+ +RSG++P+ F+ VL AC GLV +GL+ F S+ YG+ + H +
Sbjct: 350 ALRYFDMFLRSGIRPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYGIENTADHYACVI 409
Query: 837 ELLGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPP 664
+LL RS E AE++IS+M KP W +LL C++H N LA+ AA+ LF+++ + P
Sbjct: 410 DLLSRSGQFERAEEMISKMAVKPNKFLWASLLGGCRIHRNVRLARRAAEVLFEIEPENPA 469
Query: 663 AYVMLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDE 484
YV L+NIYA G +DEV VR++M+ KG+ K P SWIEV H+F VGDK+HPQ+DE
Sbjct: 470 TYVTLANIYASVGLFDEVEDVRRIMESKGVTKMPASSWIEVGRRVHVFLVGDKSHPQADE 529
Query: 483 IYGTLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLR 304
IY L KL +MRE G+ T F LHDV+DEQKE + +H E+LA+AFG+++T G P++
Sbjct: 530 IYALLKKLSVKMREEGYVADTEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGAPIK 589
Query: 303 VLKNMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
V KN+R+CGDCH A+K +S++ R+II+RD+NRFHHF G+CSC DYW
Sbjct: 590 VFKNLRICGDCHTAIKLISQMVQREIIVRDSNRFHHFKKGSCSCRDYW 637
Score = 91.3 bits (225), Expect = 1e-15
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Frame = -1
Query: 1425 LDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQ-GYAPERSTFSA-II 1252
L +AR +FD MP +D +W++L+ AY +G A+ L+ +M + G A + F+A
Sbjct: 108 LPSARALFDRMPQRDHFSWSALVSAYARHGQPGAALALYRRMYEEPGNAVADNEFTASSA 167
Query: 1251 TGFVKKGGCLEQGKQTHALVVHRGL--GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGK 1078
C G++ H VV RG+ GGD+++ S LADMY K + +VF++ +
Sbjct: 168 LAAATAARCARAGRELHCHVVRRGIDAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVR 227
Query: 1077 SLDSWTAVITGLSQHGMSQEVLRLFENMVRS-GLKPNDEIFLCVLQACTRTGLVKEGLDY 901
SWTA++ G E RLF +M+R+ G++PN+ + VL+AC + G
Sbjct: 228 DAVSWTAMVERYFDGGRGGEGFRLFLHMLRAGGVRPNEFTYAGVLRACAEFAVESFGRQV 287
Query: 900 FDSMSR 883
M++
Sbjct: 288 HGRMAK 293
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Cucumis sativus] gi|449529868|ref|XP_004171920.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 423 bits (1088), Expect = e-115
Identities = 218/521 (41%), Positives = 311/521 (59%), Gaps = 2/521 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
RQ+FD+M + + SWN MI+ A G +EAL LF M + A
Sbjct: 215 RQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQS 274
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
L+ G + G+ N ++ ++L+ Y KCG L AR++FD+M +D ++WN +I
Sbjct: 275 NALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMI 334
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
Y A+ LF +M+ G P TF +I+ G ++ GK HA +
Sbjct: 335 GGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA-IDLGKWIHAYINKNFN 393
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ +++ L D+Y K + +VF+ + KSL SW A+I GL+ HG + + LF
Sbjct: 394 SVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSK 453
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS 817
M G++PN+ F+ +L AC GLV G +F SM + Y ++P +QH G M +LLGR+
Sbjct: 454 MSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG 513
Query: 816 --EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSN 643
E AE L+ M KP G WG+LL AC+ HG EL ++ A++LF+++ P AYV+LSN
Sbjct: 514 LFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSN 573
Query: 642 IYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYK 463
IYA GKWD+VAR+R + D+G+KK PGC+ IEV N H F VGDK HPQS++IY L +
Sbjct: 574 IYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEE 633
Query: 462 LYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRV 283
+ Q++ GF TS L+D+D+E KE + HH EKLAIAFGL+ST GTP+R++KN+RV
Sbjct: 634 VDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRV 693
Query: 282 CGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
C +CH+A K +SK+ R+II RD NRFHHF DG+CSC DYW
Sbjct: 694 CRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 111 bits (278), Expect = 8e-22
Identities = 86/369 (23%), Positives = 151/369 (40%), Gaps = 36/369 (9%)
Frame = -1
Query: 1710 VFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLKW 1531
+F+ + L WN+MI + P AL F M+ G+ A L
Sbjct: 85 LFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLAS 144
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNA--------------------- 1414
+G+++H + G + + +SL+ Y + G ++NA
Sbjct: 145 AHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAG 204
Query: 1413 ----------RQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTF 1264
RQ+FD MP KD V+WN++I Y G A+ LF M P ST
Sbjct: 205 YALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTI 264
Query: 1263 SAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTE 1084
++++ + L+ G + + RGL + + + L DMY K D ++F+
Sbjct: 265 VSVLSA-CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323
Query: 1083 GKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLD 904
+ + SW +I G + +E L LF M+ SG++P + FL +L +C G + G
Sbjct: 324 ERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKW 383
Query: 903 YFDSMSRVYGLNPSNQHIGFMTELLGRSSE-----AAEKLISQMPNKPVGDAWGTLLNAC 739
+++ N ++ T L+ ++ AA ++ M K + +W ++
Sbjct: 384 IHAYINK----NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA-SWNAMICGL 438
Query: 738 KMHGNTELA 712
MHG + A
Sbjct: 439 AMHGQADKA 447
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 423 bits (1087), Expect = e-115
Identities = 212/520 (40%), Positives = 316/520 (60%), Gaps = 2/520 (0%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
++F++M R ++SWN +I + + EAL FN M GI A+L
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336
Query: 1533 WLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIV 1354
LE+G+++H A + G E N VG++LV Y KCG +++A ++F+ MP K+ VAWN++I
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396
Query: 1353 AYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLG 1174
Y +G + A+ LF++M QG P+ +++ LEQGKQ H + G
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA-LEQGKQIHGYTIRSGFE 455
Query: 1173 GDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENM 994
+ ++ + L D+Y K + K+FE+ + + SWT +I HG ++ L LF M
Sbjct: 456 SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKM 515
Query: 993 VRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS- 817
+G K + F +L AC+ GLV +GL YF M YGL P +H + +LLGR+
Sbjct: 516 QETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGH 575
Query: 816 -EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSNI 640
+ A +I M +P + WG LL AC++H N EL + AA LF++ YV+LSNI
Sbjct: 576 LDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNI 635
Query: 639 YAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYKL 460
YA+ +W++VA++R++MK+KG+KK+PGCS + V F VGD+ HPQS++IY L L
Sbjct: 636 YAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEIL 695
Query: 459 YGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRVC 280
Y QMR+ G+ P T+ AL DV++E KE ++ H EKLAI+FG+++TS G P+R++KN+RVC
Sbjct: 696 YEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVC 755
Query: 279 GDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
DCHNA K++SK+ GR+II+RD NRFHH +G CSCGDYW
Sbjct: 756 SDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 168 bits (426), Expect = 6e-39
Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 8/341 (2%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
RQVFD+M R + SWN +I+ + +G P EAL LF+ M GI A+L
Sbjct: 175 RQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHL 234
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
LE+G+++H A + GIE + V + LV Y KCG ++ A ++F+ MP +D +WN++I
Sbjct: 235 LALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAII 294
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
Y N + A+ F +M +G P T +++ LEQG+Q H + G
Sbjct: 295 GGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHL-FALEQGQQIHGYAIRSGF 353
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
+ ++ + L +MY K + + K+FE+ K++ +W A+I+G SQHG E L LF
Sbjct: 354 ESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIE 413
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLN-----PSNQHIGF-MTE 835
M G+KP+ + VL AC +++G +++G SN +G + +
Sbjct: 414 MQAQGIKPDSFAIVSVLPACAHFLALEQG-------KQIHGYTIRSGFESNVVVGTGLVD 466
Query: 834 LLGR--SSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTE 718
+ + + A+KL +MP + V +W T++ A +HG+ E
Sbjct: 467 IYAKCGNVNTAQKLFERMPEQDV-VSWTTMILAYGIHGHGE 506
Score = 153 bits (387), Expect = 2e-34
Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 2/345 (0%)
Frame = -1
Query: 1674 WNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLKWLEKGRELHFEAR 1495
W I +G+ +AL+L+ M GI+ + L+ GR++H +
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 1494 QHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAME 1315
G E + VG++L Y KCG L+NARQVFD MP +D V+WN++I Y NG A+
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 1314 LFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMY 1135
LF +M G P ST +++ LEQGKQ H + G+ D ++ + L +MY
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMP-VCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266
Query: 1134 LKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFL 955
K + K+FE+ + + SW A+I G S + E L F M G+KPN +
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326
Query: 954 CVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR--SSEAAEKLISQMPN 781
VL AC +++G R G ++ + + + + +A KL +MP
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIR-SGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK 385
Query: 780 KPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLS 646
K V AW +++ HG+ A ++ Q + KP ++ ++S
Sbjct: 386 KNV-VAWNAIISGYSQHGHPHEALALFIEM-QAQGIKPDSFAIVS 428
>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 422 bits (1085), Expect = e-115
Identities = 209/531 (39%), Positives = 322/531 (60%), Gaps = 14/531 (2%)
Frame = -1
Query: 1710 VFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLKW 1531
+FD+M +R L +W ++IS + P+E+L LF M+ G+ L
Sbjct: 131 LFDEMPHRDLVTWTSLISGYSQLDRPRESLVLFPHMLRHGL----------VPNQFTLSS 180
Query: 1530 LEK------------GRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPT 1387
L K GR+LH + G + N VG+SLV Y +CG +D+++ +FD + T
Sbjct: 181 LLKAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGLMDDSQIIFDALRT 240
Query: 1386 KDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQ 1207
K+ V+WN+LI + G +A+ LF M+ G+ P T+S++ T G +EQGK
Sbjct: 241 KNEVSWNALIAGHARKGQGEHALRLFWNMLRGGFKPTHFTYSSVFT-VCASAGSMEQGKW 299
Query: 1206 THALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGM 1027
H+ ++ G+ + + + L DMY K+ + KVF++ + + SW +++TG +QHG+
Sbjct: 300 VHSHMIKSGVNLVAFVGNTLLDMYAKSGSIEDARKVFDRLVKRDVVSWNSMLTGYAQHGL 359
Query: 1026 SQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIG 847
E ++LFE M+R G++PND FLCVL AC+ + L+ EG YF M + + + P H
Sbjct: 360 GTETVQLFEEMLRIGVQPNDISFLCVLTACSHSHLLDEGQYYFHLMRKKFKIEPQVFHYV 419
Query: 846 FMTELLGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQ 673
M +LLGR+ + A+K I +MP +P WG LL AC+MH N +L AA F++
Sbjct: 420 TMVDLLGRAGLLDRADKFIREMPTEPTAAVWGALLGACRMHNNIDLGAYAAKWAFELDPS 479
Query: 672 KPPAYVMLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQ 493
Y++L+N+YA G+ ++ A+VR++MK+ G+KKEP CSW+E++N H+F D AHPQ
Sbjct: 480 DSGPYIILANMYASAGRLNDAAKVRKMMKEGGVKKEPACSWVEIENAVHMFVANDDAHPQ 539
Query: 492 SDEIYGTLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGT 313
EIY + +++E+G+ P TS L VD +++E +Q H EK+A+AF L++T G+
Sbjct: 540 RAEIYRRWEMISKKIKEIGYVPDTSHVLFFVDQQEREFKLQFHSEKIALAFALLNTPPGS 599
Query: 312 PLRVLKNMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
+R+ KN+RVCGDCH+A+KY+SKV R+II+RD NRFHHF DG+CSCGDYW
Sbjct: 600 TIRIKKNIRVCGDCHSAIKYVSKVERREIIVRDTNRFHHFRDGSCSCGDYW 650
Score = 104 bits (260), Expect = 1e-19
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Frame = -1
Query: 1461 SSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYA 1282
++L+ Y KCG LD+A +FD MP +D V W SLI Y ++ LF M+ G
Sbjct: 113 NTLLNTYVKCGSLDHAHHLFDEMPHRDLVTWTSLISGYSQLDRPRESLVLFPHMLRHGLV 172
Query: 1281 PERSTFSAIITGFVKKGGC-----LEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDF 1117
P + T S+++ K G G+Q HA G + + + L DMY +
Sbjct: 173 PNQFTLSSLL----KAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGLM 228
Query: 1116 WNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQAC 937
+ +F+ K+ SW A+I G ++ G + LRLF NM+R G KP + V C
Sbjct: 229 DDSQIIFDALRTKNEVSWNALIAGHARKGQGEHALRLFWNMLRGGFKPTHFTYSSVFTVC 288
Query: 936 TRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS--EAAEKLISQMPNKPVGDA 763
G +++G M + G+N + ++ +S E A K+ ++ + V +
Sbjct: 289 ASAGSMEQGKWVHSHMIK-SGVNLVAFVGNTLLDMYAKSGSIEDARKVFDRLVKRDV-VS 346
Query: 762 WGTLLNACKMHG-NTELAKVAADQL 691
W ++L HG TE ++ + L
Sbjct: 347 WNSMLTGYAQHGLGTETVQLFEEML 371
>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 810
Score = 422 bits (1085), Expect = e-115
Identities = 210/520 (40%), Positives = 314/520 (60%), Gaps = 2/520 (0%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
+VF M + ++SWN +I CA +G P++AL L+ M G+ A+LK
Sbjct: 292 RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLK 351
Query: 1533 WLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIV 1354
L G+E+H +HG+E+++ +G SL+ Y CG +AR +FD M K +V+WN++I
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411
Query: 1353 AYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLG 1174
Y NG +A+ LF K+++ G+ P +++ G + L GK+TH + L
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL-GACSQQSALRLGKETHCYALKALLM 470
Query: 1173 GDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENM 994
D +A DMY K+ VF+ + K L SW A+I HG +E + LFE M
Sbjct: 471 EDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERM 530
Query: 993 VRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS- 817
+ G P+ F+ +L C+ GLV+EGL YF+ M +G+ P +H + ++LGR+
Sbjct: 531 RKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGR 590
Query: 816 -EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSNI 640
+ A +L+ +MP +P W +LL+ C+ G E+ ++ A++L +++ + YV LSN+
Sbjct: 591 LDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNL 650
Query: 639 YAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYKL 460
YA G+WD+V RVRQ++KD GL+K+ GCSWIE+ H F GD PQS E+ T KL
Sbjct: 651 YAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKL 710
Query: 459 YGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRVC 280
+M ++G+KP TS LHDVD+E+K ++ H EKLAI FGL++T+ GT LR+ KN+R+C
Sbjct: 711 EKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRIC 770
Query: 279 GDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
DCHNA K+MS+V+GR+II+RDN RFHHF DG CSCGDYW
Sbjct: 771 VDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 139 bits (351), Expect = 3e-30
Identities = 95/340 (27%), Positives = 157/340 (46%), Gaps = 7/340 (2%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGM-VGGGIHXXXXXXXXXXXXXAN 1540
+ +FDK + + SWN MI GY EA LF M + I
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLE 248
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
+ L +ELH + +HG + + V + V Y KCG L A +VF +M TK +WN+L
Sbjct: 249 ISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNAL 308
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I NGD A+ L+++M G P+ T +++ L GK+ H V+ G
Sbjct: 309 IGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKS-LRYGKEVHGFVLRHG 367
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
L DS I L +Y+ + + +F+ E KS SW A+I+G SQ+G+ ++ L LF
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFR 427
Query: 999 NMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMT----EL 832
+V G +P+D + VL AC++ ++ G + + Y L F+ ++
Sbjct: 428 KLVSDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALKALLMEDVFVACSTIDM 482
Query: 831 LGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTE 718
+S + + + + NK + +W ++ A +HG+ E
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLA-SWNAIIAAYGVHGDGE 521
Score = 99.0 bits (245), Expect = 6e-18
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 13/283 (4%)
Frame = -1
Query: 1521 GRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLD 1342
G +H + G+ ++ VG++L+ Y K G++D A +VF MP ++ V+WNS+I + +
Sbjct: 50 GEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSE 109
Query: 1341 NGDVNNAMELFVKMI--NQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGD 1168
NG + ++ V+M+ +G P+ +T ++ ++ ++ G + H L V GL D
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD-VQMGIRIHGLAVKLGLSED 168
Query: 1167 SMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENM-V 991
+ + L DMY K +F+K K+ SW +I GL G E LF M +
Sbjct: 169 VRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQM 228
Query: 990 RSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSSEA 811
+ ++ N+ L +L AC ++ S+ ++G S +H EL+ A
Sbjct: 229 QEDIEVNEVTVLNILPACLEISQLR-------SLKELHGY--SIRHGFQYDELVANGFVA 279
Query: 810 ----------AEKLISQMPNKPVGDAWGTLLNACKMHGNTELA 712
AE++ M K V ++W L+ C +G+ A
Sbjct: 280 AYAKCGMLICAERVFYSMETKTV-NSWNALIGGCAQNGDPRKA 321
Score = 99.0 bits (245), Expect = 6e-18
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 2/250 (0%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGG--GIHXXXXXXXXXXXXXAN 1540
+VF M R L SWN++IS + +G+ ++ + M+ G G+ A
Sbjct: 87 KVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAR 146
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
++ G +H A + G+ + +V +SLV Y KCG+L A+ +FD K+AV+WN++
Sbjct: 147 EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I G + A LF +M Q I + L K+ H + G
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
D ++A+ Y K +VF E K+++SW A+I G +Q+G ++ L L+
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326
Query: 999 NMVRSGLKPN 970
M SGL P+
Sbjct: 327 QMTYSGLVPD 336
>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508781793|gb|EOY29049.1|
Tetratricopeptide repeat-like superfamily protein isoform
1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
Tetratricopeptide repeat-like superfamily protein isoform
1 [Theobroma cacao]
Length = 675
Score = 421 bits (1081), Expect = e-115
Identities = 209/525 (39%), Positives = 320/525 (60%), Gaps = 6/525 (1%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R +FD+M + + SW +I+A + HG P A+ LF M+ G A L
Sbjct: 153 RNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHMLSLGFFPNQFTLSSLLKASAAL 212
Query: 1536 KWLEK----GRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAW 1369
G +LH + G+ N VGSSL+ Y +CG +D AR +FD + +K+ V+W
Sbjct: 213 PDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDEARLIFDALHSKNEVSW 272
Query: 1368 NSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVV 1189
N+LI + G ++A+ LF KM+ Q + P TF +I+ G G LEQGK HA V+
Sbjct: 273 NALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSIL-GACASTGSLEQGKWVHAHVI 331
Query: 1188 HRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLR 1009
G + + + L MY K+ + +F++ + SW +++T +QHG+ +E ++
Sbjct: 332 KSGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLTAYAQHGLGKEAVQ 391
Query: 1008 LFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELL 829
F+ M+R G+ PND FLC+L AC+R GL+ +G YF MS Y + P H + +L
Sbjct: 392 WFQEMLRIGVGPNDITFLCLLTACSRAGLLDQGQYYFKLMSN-YNIEPQISHYVTIVDLF 450
Query: 828 GRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYV 655
GR+ + AE+ I +MP KP WG LL AC+MH N EL AA+++F++ V
Sbjct: 451 GRAGLLDKAERFIREMPIKPTAAVWGALLGACRMHKNMELGTYAAERVFELDPHDSGPLV 510
Query: 654 MLSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYG 475
+LSNIYA G+W + A+VR++MK+ G+KKEP CSW+E++NT H+F D AHPQ +EI+
Sbjct: 511 LLSNIYASAGRWSDAAKVRKMMKESGVKKEPACSWVEIENTVHVFVANDDAHPQMEEIHK 570
Query: 474 TLYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLK 295
++ +++E+G+ P S L +D +++E+ +Q+H EKLA+AF L+++S G+ +R+ K
Sbjct: 571 MWEEISARIKEIGYVPDISHVLFYMDQQEREIKLQYHSEKLALAFALLNSSPGSTIRIKK 630
Query: 294 NMRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
N+RVCGDCH+A+K++S+V R+II+RD NRFHHF G+CSCGDYW
Sbjct: 631 NIRVCGDCHSAIKFVSQVVRREIIVRDTNRFHHFRGGSCSCGDYW 675
Score = 115 bits (288), Expect = 6e-23
Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%)
Frame = -1
Query: 1461 SSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYA 1282
+SL+ Y KCG LD+AR +FD MP KD V+W +LI AY +G +A+ LF M++ G+
Sbjct: 137 NSLLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHMLSLGFF 196
Query: 1281 PERSTFSAIITGFVKKGGCLE-------QGKQTHALVVHRGLGGDSMIASYLADMYLKNK 1123
P + T S+++ K L G Q HA GL + + S L DMY +
Sbjct: 197 PNQFTLSSLL----KASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCG 252
Query: 1122 DFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQ 943
+F+ K+ SW A+I G ++ G + L LF M+R +P F +L
Sbjct: 253 CMDEARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSILG 312
Query: 942 ACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELL------GRSSEAAEKLISQMPN 781
AC TG +++G + + + + FM L S + A+ + ++
Sbjct: 313 ACASTGSLEQG-----KWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVK 367
Query: 780 KPVGDAWGTLLNACKMHG 727
V +W ++L A HG
Sbjct: 368 SDV-VSWNSMLTAYAQHG 384
>ref|XP_002324099.1| hypothetical protein POPTR_0017s12720g [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| hypothetical protein
POPTR_0017s12720g [Populus trichocarpa]
Length = 676
Score = 420 bits (1080), Expect = e-115
Identities = 218/522 (41%), Positives = 308/522 (59%), Gaps = 3/522 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMV-GGGIHXXXXXXXXXXXXXAN 1540
+ +FDKM R SW MIS H P EAL+LF M A
Sbjct: 156 KSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAA 215
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
+ L G+E+H + G++ + V S+L Y KCG ++ AR +FD M +D V W ++
Sbjct: 216 VPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAM 275
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I Y +G +LF ++ G P TFS ++ + E GK+ H + G
Sbjct: 276 IDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTS-EELGKKVHGYMTRVG 334
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
S AS L MY K + + +VF++T L SWT++I G +Q+G E +R FE
Sbjct: 335 FDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFE 394
Query: 999 NMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRS 820
+V+SG +P+ F+ VL AC GLV +GLDYF S+ YGL + H + +LL RS
Sbjct: 395 LLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARS 454
Query: 819 SE--AAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLS 646
+ AE +IS+M KP W +LL C++HGN +LA+ AA+ LF+++ + P YV L+
Sbjct: 455 GQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLA 514
Query: 645 NIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLY 466
NIYA G W EVA++R+ M D+G+ K+PG SWI +K H+F VGD +HP+S EI L
Sbjct: 515 NIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLG 574
Query: 465 KLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMR 286
KL +M+E GF P T+F LHDV+DEQKE + +H EKLA+AFG++ST GTP++V KN+R
Sbjct: 575 KLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLR 634
Query: 285 VCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
C DCH A+K++SK++ R+II+RD+NRFH F DG CSC DYW
Sbjct: 635 TCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 111 bits (278), Expect = 8e-22
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 39/312 (12%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L++G+++H + G + + L+ Y KC L +++++FD MP +D +WN LI
Sbjct: 86 LQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISG 145
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFS--AIITGFVKKG------------------ 1231
Y G + A LF KM PER FS A+I+G+V+
Sbjct: 146 YAKMGLLQEAKSLFDKM------PERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNS 199
Query: 1230 -----------------GCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLK 1102
CL GK+ H ++ GL D ++ S L+DMY K
Sbjct: 200 KSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARH 259
Query: 1101 VFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGL 922
+F+K + + +WTA+I Q G +E LF +++RSG++PN+ F VL AC
Sbjct: 260 IFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTS 319
Query: 921 VKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSSE--AAEKLISQMPNKPVGDAWGTLL 748
+ G M+RV G +P + + + + +AE++ + P +P +W +L+
Sbjct: 320 EELGKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLI 377
Query: 747 NACKMHGNTELA 712
+G + A
Sbjct: 378 AGYAQNGQPDEA 389
>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
Length = 793
Score = 420 bits (1079), Expect = e-114
Identities = 212/522 (40%), Positives = 320/522 (61%), Gaps = 3/522 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGY-PQEALQLFNGMVGGGIHXXXXXXXXXXXXXAN 1540
R+VFD+M N + SW ++I+ G +EA++LF GM+ G + AN
Sbjct: 273 RKVFDRMPNHNVLSWTSIINGYVQSGEGDEEAIKLFVGMMTGHVPPNHFTFSSILKACAN 332
Query: 1539 LKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSL 1360
L L KG ++H A + G+ VG+SL+ Y + G +++AR+ FD + K+ +++N++
Sbjct: 333 LSDLRKGDQVHSLAVKLGLASVNCVGNSLISMYSRSGQVEDARKAFDILYEKNLISYNTI 392
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
+ AY + D A +F ++ + G+ TFS++++G + +G+Q HA ++ G
Sbjct: 393 VDAYAKHSDTEEAFGIFHEIQDTGFGASAFTFSSLLSGAASICA-VGKGEQIHARIIKSG 451
Query: 1179 LGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFE 1000
+ I + L MY + + VF + E ++ SWT++ITG ++HG + + +F
Sbjct: 452 FESNQGICNALVSMYSRCGNIDAAFAVFNEMEDWNVISWTSMITGFAKHGYAAAAVEMFN 511
Query: 999 NMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRS 820
M+ +GLKPN+ ++ VL AC+ GLV EG +F +M + +G+ P +H M +LLGRS
Sbjct: 512 KMLEAGLKPNEITYIAVLSACSHAGLVAEGWKHFKAMQKKHGIIPRMEHYACMVDLLGRS 571
Query: 819 SEAAEKL--ISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLS 646
E + I+ MP W T L AC++HG+ EL K AA + + AY +LS
Sbjct: 572 GSLVEAIEFINSMPFTADELIWRTFLGACRVHGHIELGKHAAKMIIEQNPHDSAAYSLLS 631
Query: 645 NIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLY 466
N+YA G W+EVA+VR+ MK+K L KE G SWIEVKN H F VGD +HP++ EIY L
Sbjct: 632 NLYASSGLWEEVAKVRKDMKEKFLIKEAGSSWIEVKNKIHKFHVGDTSHPKAREIYDELD 691
Query: 465 KLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMR 286
KL +++++GF P T F LHDV++EQKE + H EK+A+AFGL+STS P+RV KN+R
Sbjct: 692 KLGSKIKKIGFVPNTDFVLHDVEEEQKEYYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 751
Query: 285 VCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
VCGDCH A+KY+SK +GR+I++RD+NRFHHF DG CSC DYW
Sbjct: 752 VCGDCHTAIKYISKATGREIVVRDSNRFHHFKDGTCSCNDYW 793
Score = 120 bits (302), Expect = 1e-24
Identities = 97/342 (28%), Positives = 161/342 (47%), Gaps = 9/342 (2%)
Frame = -1
Query: 1710 VFDKMHN-RGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
+F+ M N R L SW+ M+S A++ EA+ F M+ G + +N +
Sbjct: 67 IFENMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLEDGFYPNEYCFASVIRACSNAQ 126
Query: 1533 WLEKGRELHFEARQHG-IEVNTQVGSSLVGFYCK-CGWLDNARQVFDNMPTKDAVAWNSL 1360
+ G + + G + + VG SL+ + K G LD+A +VF+ MP DAV W +
Sbjct: 127 NIRIGNIIFGSVIKSGYLGSDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVTWTLM 186
Query: 1359 IVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG 1180
I G A++L+V M+ G P++ T S +I+ K L G+Q H+ V+ G
Sbjct: 187 ITRLAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACTKLDS-LSLGQQLHSWVIRSG 245
Query: 1179 LGGDSMIASYLADMYLK---NKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGM-SQEVL 1012
L + L DMY K + + KVF++ ++ SWT++I G Q G +E +
Sbjct: 246 LALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTSIINGYVQSGEGDEEAI 305
Query: 1011 RLFENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTEL 832
+LF M+ + PN F +L+AC +++G D S++ GL N + +
Sbjct: 306 KLFVGMMTGHVPPNHFTFSSILKACANLSDLRKG-DQVHSLAVKLGLASVNCVGNSLISM 364
Query: 831 LGRSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELA 712
RS E A K + K + ++ T+++A H +TE A
Sbjct: 365 YSRSGQVEDARKAFDILYEKNL-ISYNTIVDAYAKHSDTEEA 405
Score = 114 bits (285), Expect = 1e-22
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANLK 1534
+VF+ M +W MI+ A G P EA+ L+ M+ G+ L
Sbjct: 170 KVFETMPETDAVTWTLMITRLAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACTKLD 229
Query: 1533 WLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKC---GWLDNARQVFDNMPTKDAVAWNS 1363
L G++LH + G+ + VG LV Y KC G +D+AR+VFD MP + ++W S
Sbjct: 230 SLSLGQQLHSWVIRSGLALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTS 289
Query: 1362 LIVAYLDNGDVN-NAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVH 1186
+I Y+ +G+ + A++LFV M+ P TFS+I+ L +G Q H+L V
Sbjct: 290 IINGYVQSGEGDEEAIKLFVGMMTGHVPPNHFTFSSILKACANLSD-LRKGDQVHSLAVK 348
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
GL + + + L MY ++ + K F+ K+L S+ ++ ++H ++E +
Sbjct: 349 LGLASVNCVGNSLISMYSRSGQVEDARKAFDILYEKNLISYNTIVDAYAKHSDTEEAFGI 408
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEG 910
F + +G + F +L V +G
Sbjct: 409 FHEIQDTGFGASAFTFSSLLSGAASICAVGKG 440
Score = 84.0 bits (206), Expect = 2e-13
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 10/304 (3%)
Frame = -1
Query: 1521 GRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTK-DAVAWNSLIVAYL 1345
GR +H +E++ V +SL+ Y K A +F+NM K + V+W++++ +
Sbjct: 29 GRLVHARLVHSQLELDPVVLNSLISLYSKSRDWKKANSIFENMGNKRNLVSWSAMVSCFA 88
Query: 1344 DNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRG-LGGD 1168
+N A+ F+ M+ G+ P F+++I + G V+ G LG D
Sbjct: 89 NNDMGLEAILTFLDMLEDGFYPNEYCFASVIRA-CSNAQNIRIGNIIFGSVIKSGYLGSD 147
Query: 1167 SMIASYLADMYLKNK-DFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMV 991
+ L DM+ K + + KVFE +WT +IT L+Q G E + L+ +M+
Sbjct: 148 VCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVTWTLMITRLAQMGCPGEAIDLYVDML 207
Query: 990 RSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR---- 823
SGL P+ V+ ACT+ + G + R GL + + ++ +
Sbjct: 208 WSGLMPDQFTLSGVISACTKLDSLSLGQQLHSWVIR-SGLALGHCVGCCLVDMYAKCAAD 266
Query: 822 -SSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLF--QMKDQKPPAYVM 652
S + A K+ +MPN V +W +++N G + A +LF M PP +
Sbjct: 267 GSMDDARKVFDRMPNHNV-LSWTSIINGYVQSGEGD---EEAIKLFVGMMTGHVPPNHFT 322
Query: 651 LSNI 640
S+I
Sbjct: 323 FSSI 326
Score = 63.5 bits (153), Expect = 3e-07
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = -1
Query: 1302 MINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNK 1123
M +G P+ +S ++ ++ + G+ HA +VH L D ++ + L +Y K++
Sbjct: 1 MAQRGTHPDLPIYSLLLKSCIRSRN-FDLGRLVHARLVHSQLELDPVVLNSLISLYSKSR 59
Query: 1122 DFWNCLKVFEKTEGK-SLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVL 946
D+ +FE K +L SW+A+++ + + M E + F +M+ G PN+ F V+
Sbjct: 60 DWKKANSIFENMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLEDGFYPNEYCFASVI 119
Query: 945 QACTRTGLVKEGLDYFDSM 889
+AC+ ++ G F S+
Sbjct: 120 RACSNAQNIRIGNIIFGSV 138
>ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 419 bits (1078), Expect = e-114
Identities = 217/521 (41%), Positives = 305/521 (58%), Gaps = 2/521 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R+VFD+M + + SWN ++ CA G EAL L M G A
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 1536 KWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLI 1357
+ +G ELH A ++G + VGSSL+ Y C D + +VFDN+P +DA+ WNS++
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246
Query: 1356 VAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHRGL 1177
NG V+ A+ LF +M++ G P TFS++I L GKQ HA V+ G
Sbjct: 247 AGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLL-LGKQLHAYVIRGGF 305
Query: 1176 GGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFEN 997
G+ I+S L DMY K + ++F++ + + SWTA+I G + HG ++E L LF+
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365
Query: 996 MVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGRSS 817
M LKPN FL VL AC+ GLV +G YF+SMS YG+ PS +H + + LGR
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPG 425
Query: 816 --EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVMLSN 643
E A IS M KP W TLL ACK+H NT LA+ A ++F ++ + ++++LSN
Sbjct: 426 KLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSN 485
Query: 642 IYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTLYK 463
Y+ G+W+E A +R+ M+ KG++KEP CSWIEVKN H+F DK+HP + I L
Sbjct: 486 TYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNV 545
Query: 462 LYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNMRV 283
QM G+ P T D+++EQK ++ H EKLAI FG++ST GT +RV+KN+RV
Sbjct: 546 FSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRV 605
Query: 282 CGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
C DCH K++SK+ GR+I++RD NRFHHF DG CSCGD+W
Sbjct: 606 CVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 100 bits (248), Expect = 3e-18
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Frame = -1
Query: 1521 GRELHFEARQHGIEVNTQVGSSLVGFYCKCGW--------------LDNARQVFDNMPTK 1384
G LH A + G + ++L+ YCK L++ R+VFD MP K
Sbjct: 77 GASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK 136
Query: 1383 DAVAWNSLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQT 1204
D V+WN+L++ ++G A+ L +M G P+ T S+++ F +G + +G +
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA-EGADVRRGMEL 195
Query: 1203 HALVVHRGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMS 1024
H G D + S L DMY +KVF+ + W +++ G +Q+G
Sbjct: 196 HGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSV 255
Query: 1023 QEVLRLFENMVRSGLKPNDEIFLCVLQAC 937
E L LF M+ SG+KP F ++ AC
Sbjct: 256 DEALGLFRRMLHSGIKPMPVTFSSLIPAC 284
>gb|EOX91314.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 684
Score = 419 bits (1077), Expect = e-114
Identities = 220/524 (41%), Positives = 314/524 (59%), Gaps = 6/524 (1%)
Frame = -1
Query: 1713 QVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFN----GMVGGGIHXXXXXXXXXXXXX 1546
++FD+M R SW MIS P+EAL+L+ MV
Sbjct: 165 KLFDEMPERDNFSWTAMISGYVRFDRPKEALELYRMKEMSMVS---KLNKFTVSSAIAAS 221
Query: 1545 ANLKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWN 1366
A + L G+E+H + G++++ V S+L+ Y KCG ++ AR+VFD + +D V+W
Sbjct: 222 AAMGCLTTGKEIHGRITRAGLDLDEVVWSALMDMYGKCGSIEEARRVFDKIVDRDIVSWT 281
Query: 1365 SLIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVH 1186
++I Y ++G ELF +++ G P TF+ ++ E GKQ H +
Sbjct: 282 AMIDRYFEDGRWEEGFELFSELMKSGIRPNEFTFAGVLNACADHAA-EEIGKQVHGCMTR 340
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
G S AS L MY K + N +VF L SWT++ITG +Q+G +E L
Sbjct: 341 LGFNPFSFAASALVHMYSKCGNVENAKRVFNGMPLPDLVSWTSLITGYAQNGQPEEALEY 400
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLG 826
FE +++SG KP+ F+ VL ACT GLV +GL+YF S+ +GL + H + +LL
Sbjct: 401 FELLLKSGTKPDHITFVGVLSACTHAGLVDKGLEYFHSIKDRHGLTHTADHYACIIDLLA 460
Query: 825 RSS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVM 652
RS + AE +I +MP KP W +LL C++HGN ELA+ AA+ LF+++ + P YV
Sbjct: 461 RSGRFQEAENIIVKMPMKPDKFLWASLLGGCRIHGNLELAEKAAEALFEIEPENPATYVT 520
Query: 651 LSNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGT 472
++NIYA G+WDEVA++R+ M DKG+ K+PG SWIEVK H+F VGD HP+S EI
Sbjct: 521 MANIYATAGRWDEVAKIRKKMDDKGVVKKPGLSWIEVKRELHVFLVGDTTHPKSKEINEF 580
Query: 471 LYKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKN 292
L KL +MRE G+ P T+F LHDV++EQKE + +H EKLA+AFG+++T GTP++V KN
Sbjct: 581 LVKLSKRMREEGYVPNTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIIATPPGTPIKVFKN 640
Query: 291 MRVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
+R C DCHNA+KY+SK+ R+I +RD+NRFH F DG CSC DYW
Sbjct: 641 LRTCVDCHNAIKYISKIVDRKITVRDSNRFHCFEDGNCSCRDYW 684
Score = 117 bits (292), Expect = 2e-23
Identities = 86/312 (27%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Frame = -1
Query: 1530 LEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNSLIVA 1351
L +G+ +H + G + + L+ Y KCG L +A+ VFD M +D +WN+L+
Sbjct: 94 LNEGKSVHQHIKISGFSAGLVICNRLLDMYAKCGSLADAQNVFDEMSERDLCSWNTLMSG 153
Query: 1350 YLDNGDVNNAMELFVKMINQGYAPERSTFS--AIITGFVKKG------------------ 1231
Y G + A +LF +M PER FS A+I+G+V+
Sbjct: 154 YAKMGMLKEANKLFDEM------PERDNFSWTAMISGYVRFDRPKEALELYRMKEMSMVS 207
Query: 1230 -----------------GCLEQGKQTHALVVHRGLGGDSMIASYLADMYLKNKDFWNCLK 1102
GCL GK+ H + GL D ++ S L DMY K +
Sbjct: 208 KLNKFTVSSAIAASAAMGCLTTGKEIHGRITRAGLDLDEVVWSALMDMYGKCGSIEEARR 267
Query: 1101 VFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLFENMVRSGLKPNDEIFLCVLQACTRTGL 922
VF+K + + SWTA+I + G +E LF +++SG++PN+ F VL AC
Sbjct: 268 VFDKIVDRDIVSWTAMIDRYFEDGRWEEGFELFSELMKSGIRPNEFTFAGVLNACADHAA 327
Query: 921 VKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR--SSEAAEKLISQMPNKPVGDAWGTLL 748
+ G M+R+ G NP + + + + + E A+++ + MP P +W +L+
Sbjct: 328 EEIGKQVHGCMTRL-GFNPFSFAASALVHMYSKCGNVENAKRVFNGMP-LPDLVSWTSLI 385
Query: 747 NACKMHGNTELA 712
+G E A
Sbjct: 386 TGYAQNGQPEEA 397
>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222854713|gb|EEE92260.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 590
Score = 418 bits (1075), Expect = e-114
Identities = 206/523 (39%), Positives = 321/523 (61%), Gaps = 4/523 (0%)
Frame = -1
Query: 1716 RQVFDKMHNRGLSSWNNMISACAHHGYPQEALQLFNGMVGGGIHXXXXXXXXXXXXXANL 1537
R++FD+M +R + +W +I+ + H PQ+AL L M+ G+ + +
Sbjct: 70 RKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGV 129
Query: 1536 KWLE--KGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNS 1363
+ +GR+LH ++G + N V +++ Y +C L+ A+ +FD M +K+ V+WN+
Sbjct: 130 GSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNA 189
Query: 1362 LIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGCLEQGKQTHALVVHR 1183
LI Y G + A LF M+ + P T+S+++ G LEQGK HAL++
Sbjct: 190 LIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGS-LEQGKWVHALMIKW 248
Query: 1182 GLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRLF 1003
G + + + L DMY K+ + KVF++ + + SW +++TG SQHG+ + L+ F
Sbjct: 249 GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRF 308
Query: 1002 ENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELLGR 823
E M+R+ + PND FLCVL AC+ GL+ EG YFD M + Y + P H M +LLGR
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGR 367
Query: 822 SS--EAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQMKDQKPPAYVML 649
+ + A + IS+MP KP WG LL AC+MH N EL AA+ +F++ P +V+L
Sbjct: 368 AGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLL 427
Query: 648 SNIYAQDGKWDEVARVRQLMKDKGLKKEPGCSWIEVKNTTHLFFVGDKAHPQSDEIYGTL 469
NIYA G+W++ A+VR++MK+ G+KKEP CSW+E++N H+F D AHPQ EI+
Sbjct: 428 YNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMW 487
Query: 468 YKLYGQMRELGFKPTTSFALHDVDDEQKELLVQHHCEKLAIAFGLMSTSHGTPLRVLKNM 289
++ +++E+G+ P +S L +D +++E +Q+H EKLA+AF L++T G+ +R+ KN+
Sbjct: 488 EQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNI 547
Query: 288 RVCGDCHNAVKYMSKVSGRQIILRDNNRFHHFADGACSCGDYW 160
R+CGDCH+A K++SK+ R+II+RD NRFHHF DGACSC DYW
Sbjct: 548 RICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 106 bits (265), Expect = 3e-20
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 7/294 (2%)
Frame = -1
Query: 1542 NLKWLEKGRELHFEARQHGIEVNTQVGSSLVGFYCKCGWLDNARQVFDNMPTKDAVAWNS 1363
+L L +G+ +H + + ++L+ Y KCG L AR++FD M ++D V W +
Sbjct: 27 HLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTA 86
Query: 1362 LIVAYLDNGDVNNAMELFVKMINQGYAPERSTFSAIITGFVKKGGC-LEQGKQTHALVVH 1186
LI Y + +A+ L +M+ G P + T ++++ G + QG+Q H L +
Sbjct: 87 LITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLR 146
Query: 1185 RGLGGDSMIASYLADMYLKNKDFWNCLKVFEKTEGKSLDSWTAVITGLSQHGMSQEVLRL 1006
G + ++ + DMY + +F+ K+ SW A+I G ++ G + L
Sbjct: 147 YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCL 206
Query: 1005 FENMVRSGLKPNDEIFLCVLQACTRTGLVKEGLDYFDSMSRVYGLNPSNQHIGFMTELL- 829
F NM+R +KP + VL AC G +++G + ++ +G + + F+ L
Sbjct: 207 FSNMLRENVKPTHFTYSSVLCACASMGSLEQG-KWVHALMIKWG----EKLVAFVGNTLL 261
Query: 828 -----GRSSEAAEKLISQMPNKPVGDAWGTLLNACKMHGNTELAKVAADQLFQM 682
S E A+K+ ++ + V +W ++L HG L KVA + +M
Sbjct: 262 DMYAKSGSIEDAKKVFDRLAKRDV-VSWNSMLTGYSQHG---LGKVALQRFEEM 311