BLASTX nr result

ID: Ephedra28_contig00007728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00007728
         (1031 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                             110   7e-22
gb|ABR17776.1| unknown [Picea sitchensis]                             100   1e-18
gb|ABR16492.1| unknown [Picea sitchensis]                              99   3e-18
gb|ADE76554.1| unknown [Picea sitchensis]                              92   3e-16

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score =  110 bits (276), Expect = 7e-22
 Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 150 KKRMIISKVRQGIMRHGFVIFTRPGGDQTTDLRLGVSSHTVS-TDVNTELKEWIDEAWKN 326
           +++ +I++VR+   RHGFV+F R G   T D RLGV +H     D+ +E+ EW+++AW++
Sbjct: 406 EQKAVITRVRRLPKRHGFVVFCREG-QTTVDFRLGVVTHAADLNDIRSEMVEWVEKAWRD 464

Query: 327 GEGNKLDFSGCGKGNLEVLAVHYKRAETYATEDFKLRVSWVEE-DNMEKGKSGRWECHLS 503
              ++L F     G   ++ + YK  ETY TED+K R+S V E D     ++ RWEC LS
Sbjct: 465 RTPDQL-FVFPHPGRFLMMNIRYKETETYVTEDWKFRISHVAEGDRTGLVRNRRWECGLS 523

Query: 504 SRRFEWNNAINEDDASSVLLETGIVSLIKKGALVS 608
           SR F+WN+ I +  +   +++T +V+L+K+    S
Sbjct: 524 SRWFKWNDGITDSRSMESIMKTDVVALVKEAVKFS 558


>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score =  100 bits (248), Expect = 1e-18
 Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
 Frame = +3

Query: 150 KKRMIISKVRQGIMRHGFVIFTRPGGDQTTDLRLGVSSHTVS-TDVNTELKEWIDEAWKN 326
           +++ +I+++R    RHGFV F R G   TTD RL V +H     ++  E+ + +D+AW++
Sbjct: 267 EQKAVITRIRGLPKRHGFVTFCREGRT-TTDFRLAVVTHEADLNNIRPEMVQLVDQAWRD 325

Query: 327 GEGNKLDFSGCGKGNLEVLAVHYKRAETYATEDFKLRVSWV-EEDNMEKGKSGRWECHLS 503
              ++L       G    + + YK  ETY TED+K R+S V E D     ++ RWEC LS
Sbjct: 326 RTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFRISKVGEADRTGMMENERWECGLS 384

Query: 504 SRRFEWNNAINEDDASSVLLETGIVSLIKKGALVSRAM 617
           SR F+WN+ I    +   +++T +V+L+K+ A +S AM
Sbjct: 385 SRWFKWNDGITGSASMDSIVKTDVVALVKEAAKLSEAM 422


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = +3

Query: 150 KKRMIISKVRQGIMRHGFVIFTRPGGDQTTDLRLGVSSHTVS-TDVNTELKEWIDEAWKN 326
           ++R +I+++R    RHGFV F R G   TTD RL V +H     ++  E+ + +D+AW++
Sbjct: 416 EQRAVITRIRGLPKRHGFVTFCREGRT-TTDFRLAVVTHEADLNNIRPEMVQLVDQAWRD 474

Query: 327 GEGNKLDFSGCGKGNLEVLAVHYKRAETYATEDFKLRVSWV-EEDNMEKGKSGRWECHLS 503
              ++L       G    + + YK  ETY TED+K R+S V E D     ++ RWEC LS
Sbjct: 475 RTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFRISKVGEADRTGMMENERWECGLS 533

Query: 504 SRRFEWNNAINEDDASSVLLETGIVSLIKKGALVSRAM 617
           SR F+WN+ I    +   +++T +V+L+K+ A +S  M
Sbjct: 534 SRWFKWNDGITGSASMDSIVKTDVVALVKEAAKLSEDM 571


>gb|ADE76554.1| unknown [Picea sitchensis]
          Length = 168

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
 Frame = +3

Query: 141 GGEKKRMIISKVRQGIMRHGFVIFTRPGGDQTTDLRLGVSSHTVST-DVNTELKEWIDEA 317
           G E++   I+ VR+   RH FV F R G   T+D R+G+++H     ++  E+ EW+D+A
Sbjct: 4   GLEERPAAITSVRRLARRHVFVAFCREG-QMTSDFRMGLTTHEADVANIPAEMVEWVDQA 62

Query: 318 WKNGEGNK-LDFSGCGKGNLEVLAVHYKRAETYATEDFKLRVSWVEE-DNMEKGKSGRWE 491
           W+N   N+ L F   G+    V+ + YK  ET+ TED+K R+S + + D      +  WE
Sbjct: 63  WRNRNPNQSLVFPPPGR--FLVINICYKETETFLTEDWKFRISQIAKGDRTNIIPNKTWE 120

Query: 492 CHLSSRRFEWNNAINEDDASS----VLLETGIVSLIKKGALVSRAMD 620
           C LSSR F+WN  + +   +S      +E+ +V+L+K+    S +++
Sbjct: 121 CRLSSRSFKWNYGLTDTAKTSEDMDSAVESEVVALVKEAVKFSESIE 167


Top