BLASTX nr result

ID: Ephedra28_contig00007698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00007698
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part...    45   7e-07
gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo...    41   4e-06
ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    38   1e-05

>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
           trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
           protein POPTR_0009s05520g, partial [Populus trichocarpa]
          Length = 728

 Score = 44.7 bits (104), Expect(2) = 7e-07
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = -2

Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280
           MD YEA  +V+ R+   EPENASKI+GYLLLQ+
Sbjct: 44  MDSYEATNIVFSRIQSLEPENASKIMGYLLLQD 76



 Score = 33.9 bits (76), Expect(2) = 7e-07
 Identities = 18/33 (54%), Positives = 20/33 (60%)
 Frame = -3

Query: 272 QEMIRLVFGPDDLLQILISTTKKYLDLAPTTSS 174
           +EMIRL FGP+ LLQ LI  TK  L     T S
Sbjct: 80  KEMIRLAFGPETLLQNLILQTKTQLGFPSNTPS 112


>gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis]
          Length = 563

 Score = 41.2 bits (95), Expect(2) = 4e-06
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -2

Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280
           MD YEA   V+ R+   EPENA+KI+GYLL+Q+
Sbjct: 1   MDSYEASRTVFSRIQSLEPENATKIMGYLLIQD 33



 Score = 35.0 bits (79), Expect(2) = 4e-06
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -3

Query: 272 QEMIRLVFGPDDLLQILISTTKKYLDLAPTTSS 174
           +EMIRL FGP+ LL  LI   K +L + P +SS
Sbjct: 37  KEMIRLAFGPESLLHNLIIKAKTHLAILPKSSS 69


>ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 23-like [Oryza brachyantha]
          Length = 667

 Score = 38.1 bits (87), Expect(2) = 1e-05
 Identities = 16/33 (48%), Positives = 26/33 (78%)
 Frame = -2

Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280
           MD YEA  VV+ R+   +P++A+KI+G+LL+Q+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQD 33



 Score = 36.6 bits (83), Expect(2) = 1e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = -3

Query: 275 NQEMIRLVFGPDDLLQILISTTKKYLDLAPTTSSDV 168
           ++EMIRL FGP+ LLQ +I+  +K L L P +S  V
Sbjct: 36  DKEMIRLAFGPEALLQSVIAQARKDLALLPASSPTV 71


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