BLASTX nr result
ID: Ephedra28_contig00007698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00007698 (517 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 45 7e-07 gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo... 41 4e-06 ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 38 1e-05 >ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical protein POPTR_0009s05520g, partial [Populus trichocarpa] Length = 728 Score = 44.7 bits (104), Expect(2) = 7e-07 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = -2 Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280 MD YEA +V+ R+ EPENASKI+GYLLLQ+ Sbjct: 44 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQD 76 Score = 33.9 bits (76), Expect(2) = 7e-07 Identities = 18/33 (54%), Positives = 20/33 (60%) Frame = -3 Query: 272 QEMIRLVFGPDDLLQILISTTKKYLDLAPTTSS 174 +EMIRL FGP+ LLQ LI TK L T S Sbjct: 80 KEMIRLAFGPETLLQNLILQTKTQLGFPSNTPS 112 >gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis] Length = 563 Score = 41.2 bits (95), Expect(2) = 4e-06 Identities = 19/33 (57%), Positives = 25/33 (75%) Frame = -2 Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280 MD YEA V+ R+ EPENA+KI+GYLL+Q+ Sbjct: 1 MDSYEASRTVFSRIQSLEPENATKIMGYLLIQD 33 Score = 35.0 bits (79), Expect(2) = 4e-06 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = -3 Query: 272 QEMIRLVFGPDDLLQILISTTKKYLDLAPTTSS 174 +EMIRL FGP+ LL LI K +L + P +SS Sbjct: 37 KEMIRLAFGPESLLHNLIIKAKTHLAILPKSSS 69 >ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 23-like [Oryza brachyantha] Length = 667 Score = 38.1 bits (87), Expect(2) = 1e-05 Identities = 16/33 (48%), Positives = 26/33 (78%) Frame = -2 Query: 378 MDVYEAIYVVY*RV*RFEPENASKIIGYLLLQE 280 MD YEA VV+ R+ +P++A+KI+G+LL+Q+ Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQD 33 Score = 36.6 bits (83), Expect(2) = 1e-05 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = -3 Query: 275 NQEMIRLVFGPDDLLQILISTTKKYLDLAPTTSSDV 168 ++EMIRL FGP+ LLQ +I+ +K L L P +S V Sbjct: 36 DKEMIRLAFGPEALLQSVIAQARKDLALLPASSPTV 71